; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G002630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G002630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein RALF-like 17
Genome locationCmo_Chr20:1294232..1294579
RNA-Seq ExpressionCmoCh20G002630
SyntenyCmoCh20G002630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054503.1 hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa]1.2e-3169.23Show/hide
Query:  MAVSRRLAL-LSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLR-EAEEED
        MA+SRRLAL LSLGTIL   LFTR + A SDYG+DIHTVRH SD+ +C R+   KGDQCRE+ND  ED+DFDDTYKIVNN+AI LSASGS L+ +AEE D
Subjt:  MAVSRRLAL-LSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLR-EAEEED

Query:  DLPVPEEEIRNLSIVGH
        D+P  EEEI N+ IVGH
Subjt:  DLPVPEEEIRNLSIVGH

KAE8646929.1 hypothetical protein Csa_021071 [Cucumis sativus]1.7e-2562.61Show/hide
Query:  MAVSRRLAL-LSLGTILLCLLFTR-AAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKL-REAEEE
        MA+SRRL L L+LGTIL C LF   +A A  DYGDDIHTV+H SD+  C R+   KGDQCREEND  ED+DFDDTYKIVNN+A+ LSASG  L +E EE 
Subjt:  MAVSRRLAL-LSLGTILLCLLFTR-AAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKL-REAEEE

Query:  DDLPVPEEEIRNLSI
        +D+P  EEE+ N+ I
Subjt:  DDLPVPEEEIRNLSI

KAF3443367.1 hypothetical protein FNV43_RR13049 [Rhamnella rubrinervis]3.4e-1044.94Show/hide
Query:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVE-DEDFDDTYKIVNNVAIRLSASG
        MA+SR L L  LGT+ +  L  +   AE     DIH+V+H   S+ C    P KG+QC ++ +G+E D+DFDDTYK+VN V + LS  G
Subjt:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVE-DEDFDDTYKIVNNVAIRLSASG

KAG6570557.1 hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5499.13Show/hide
Query:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDDL
        MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNR+QPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDDL
Subjt:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDDL

Query:  PVPEEEIRNLSIVGH
        PVPEEEIRNLSIVGH
Subjt:  PVPEEEIRNLSIVGH

KAG6604744.1 hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1964.52Show/hide
Query:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLRE
        MAVSRRLAL SLGTILLC L TRAA+A+SD+G ++H VR+SS + +    +  K  QCR+END V D+DFDDTYKIVNN+AI LSASG  L+E
Subjt:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLRE

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ4 Uncharacterized protein5.1e-2863.56Show/hide
Query:  MAVSRRLAL-LSLGTILLCLLFTR-AAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKL-REAEEE
        MA+SRRL L L+LGTIL C LF   +A A  DYGDDIHTV+H SD+  C R+   KGDQCREEND  ED+DFDDTYKIVNN+A+ LSASG  L +E EE 
Subjt:  MAVSRRLAL-LSLGTILLCLLFTR-AAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKL-REAEEE

Query:  DDLPVPEEEIRNLSIVGH
        +D+P  EEE+ N+ IVGH
Subjt:  DDLPVPEEEIRNLSIVGH

A0A2N9FLD3 Uncharacterized protein3.9e-1241.32Show/hide
Query:  MAVSRRLALLSLGTILLCLLFTRAAIA-ESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVE--DEDFDDTYKIVNNVAIRLSASGSKLREAEE-
        MA+SR + L  LGT+L+CLL  + + A ESD+   IH ++H  D  +C+   P  GDQCR ++D  E  D+D DDTYK+VN +++  SAS  +   +E+ 
Subjt:  MAVSRRLALLSLGTILLCLLFTRAAIA-ESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVE--DEDFDDTYKIVNNVAIRLSASGSKLREAEE-

Query:  -EDDLPVPEEEIRN-LSIVGH
         E D    EEE+ N + ++GH
Subjt:  -EDDLPVPEEEIRN-LSIVGH

A0A498J3I4 Uncharacterized protein1.2e-0843.22Show/hide
Query:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCRE-ENDGVEDEDFDDTYKIVNNVAIRLSA-SGSKLREAEEED
        MAVSRRL LL LGT+L  +   + A A  ++GD             C+   P  GDQCRE E D V D+D DDTYKIVN VA+ LSA +G    +A+E  
Subjt:  MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCRE-ENDGVEDEDFDDTYKIVNNVAIRLSA-SGSKLREAEEED

Query:  DLPVPEE-EIRNLSIVGH
        D    E+ E  ++ ++GH
Subjt:  DLPVPEE-EIRNLSIVGH

A0A5D3CVV2 Uncharacterized protein5.8e-3269.23Show/hide
Query:  MAVSRRLAL-LSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLR-EAEEED
        MA+SRRLAL LSLGTIL   LFTR + A SDYG+DIHTVRH SD+ +C R+   KGDQCRE+ND  ED+DFDDTYKIVNN+AI LSASGS L+ +AEE D
Subjt:  MAVSRRLAL-LSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLR-EAEEED

Query:  DLPVPEEEIRNLSIVGH
        D+P  EEEI N+ IVGH
Subjt:  DLPVPEEEIRNLSIVGH

A0A6A1VA77 Uncharacterized protein2.1e-1040.17Show/hide
Query:  MAVSRRLALLSLGTILLCLLFTRAAIAES-DYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDD
        MA+SR  AL  LGT+L+ L   +A  A+    G  IH VR   D   C+ Q P KGDQCR++++   D+D DDT+K+VN +++ LSAS  K+  +    D
Subjt:  MAVSRRLALLSLGTILLCLLFTRAAIAES-DYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDD

Query:  LPVPEEEIRN-LSIVGH
          +  EE+ N + ++GH
Subjt:  LPVPEEEIRN-LSIVGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAAGACGACTGGCCCTTCTCTCCCTCGGAACAATCCTTCTGTGCCTCTTGTTCACTAGAGCCGCCATCGCCGAGTCCGACTACGGCGACGACATTCACAC
CGTCAGGCATTCCTCCGATTCCGACAACTGCAATCGCCAGCAACCCTACAAAGGCGACCAATGCAGGGAAGAAAACGACGGCGTAGAGGATGAAGATTTTGATGACACCT
ACAAGATCGTCAATAACGTCGCCATAAGGTTATCGGCGTCCGGAAGCAAACTTCGTGAGGCGGAGGAAGAGGACGATCTGCCGGTGCCCGAGGAAGAGATCCGCAATCTA
TCGATAGTGGGGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTCAAGACGACTGGCCCTTCTCTCCCTCGGAACAATCCTTCTGTGCCTCTTGTTCACTAGAGCCGCCATCGCCGAGTCCGACTACGGCGACGACATTCACAC
CGTCAGGCATTCCTCCGATTCCGACAACTGCAATCGCCAGCAACCCTACAAAGGCGACCAATGCAGGGAAGAAAACGACGGCGTAGAGGATGAAGATTTTGATGACACCT
ACAAGATCGTCAATAACGTCGCCATAAGGTTATCGGCGTCCGGAAGCAAACTTCGTGAGGCGGAGGAAGAGGACGATCTGCCGGTGCCCGAGGAAGAGATCCGCAATCTA
TCGATAGTGGGGCACTGA
Protein sequenceShow/hide protein sequence
MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDSDNCNRQQPYKGDQCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDDLPVPEEEIRNL
SIVGH