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CmoCh20G002860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G002860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:1386164..1386812
RNA-Seq ExpressionCmoCh20G002860
SyntenyCmoCh20G002860
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR018060 - DNA binding HTH domain, AraC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570576.1 hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2198.11Show/hide
Query:  RQHFGISPHAFRLSIASSRFPLLPFLGHGGTPKSGSIRFLILNSYMNFQMGMC
        +QHFGISPHAFRLSIASSRFPLLPFLGHGGTPKSGSIRFLILNSYMNFQMGMC
Subjt:  RQHFGISPHAFRLSIASSRFPLLPFLGHGGTPKSGSIRFLILNSYMNFQMGMC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCTCTATTGCAAACCAAGCTTCCTTTCCAGCTTGCAGAGAGGACCCTTTTTCTTTCAGACAACATTTTGGCATATCCCCCCATGCTTTCCGCCTCTCCATTGC
CTCATCACGATTCCCTTTGCTTCCCTTTCTGGGTCATGGAGGAACACCCAAATCTGGGTCCATAAGGTTCTTAATTCTTAACTCATACATGAATTTCCAGATGGGAATGT
GTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCCTCTATTGCAAACCAAGCTTCCTTTCCAGCTTGCAGAGAGGACCCTTTTTCTTTCAGACAACATTTTGGCATATCCCCCCATGCTTTCCGCCTCTCCATTGC
CTCATCACGATTCCCTTTGCTTCCCTTTCTGGGTCATGGAGGAACACCCAAATCTGGGTCCATAAGGTTCTTAATTCTTAACTCATACATGAATTTCCAGATGGGAATGT
GTTGA
Protein sequenceShow/hide protein sequence
MVSSIANQASFPACREDPFSFRQHFGISPHAFRLSIASSRFPLLPFLGHGGTPKSGSIRFLILNSYMNFQMGMC