CuGenDBv2

Gene ID	CmoCh20G003010
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Ubiquitin-NEDD8-like protein RUB2
Genome location	Cmo_Chr20:1470560..1472950
RNA-Seq Expression	CmoCh20G003010
Synteny	CmoCh20G003010
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR019954 - Ubiquitin conserved site IPR019956 - Ubiquitin domain IPR029071 - Ubiquitin-like domain superfamily IPR038738 - Nedd8-like ubiquitin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

PIA33361.1 hypothetical protein AQUCO_04100049v1 [Aquilegia coerulea]

5.6e-77

98.7

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAK+YNIEGGSVLHLVLALRGGGY
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY

XP_010540689.1 PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Tarenaya hassleriana]

1.3e-76

99.35

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG

XP_022943496.1 ubiquitin-NEDD8-like protein RUB2 [Cucurbita moschata]

6.7e-78

100

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
        RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

XP_022948030.1 ubiquitin-NEDD8-like protein RUB2 [Cucurbita moschata]

8.7e-78

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

XP_024977097.1 ubiquitin-NEDD8-like protein RUB2 [Cynara cardunculus var. scolymus]

9.6e-77

98.71

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG L
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

TrEMBL top hits

e value

%identity

Alignment

A0A2G5CPW7 Uncharacterized protein

2.7e-77

98.7

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAK+YNIEGGSVLHLVLALRGGGY
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY

A0A397Z8D4 Uncharacterized protein

6.1e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGG

A0A6J1FRW0 ubiquitin-NEDD8-like protein RUB2

3.2e-78

100

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
        RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

A0A6J1G8J7 ubiquitin-NEDD8-like protein RUB2

4.2e-78

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

A0A6J1I1R0 ubiquitin-NEDD8-like protein RUB2

4.2e-78

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

SwissProt top hits

e value

%identity

Alignment

P0C030 Ubiquitin-NEDD8-like protein RUB1

8.2e-79

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

P0C031 Ubiquitin-NEDD8-like protein RUB2

8.2e-79

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

P0C073 Ubiquitin-NEDD8-like protein RUB1

6.3e-79

100

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

Q8RUC6 Ubiquitin-NEDD8-like protein RUB2

6.9e-78

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDY IEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

Q9SHE7 Ubiquitin-NEDD8-like protein RUB1

8.2e-79

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G31340.1 related to ubiquitin 1

5.8e-80

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

AT2G35635.1 ubiquitin 7

4.9e-79

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQLADDKTAKDY IEGGSVLHLVLALRGG
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG

AT5G03240.1 polyubiquitin 3

1.2e-64

80.52

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY
         VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG +
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY

AT5G03240.2 polyubiquitin 3

1.2e-64

80.52

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY
         VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG +
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY

AT5G20620.1 ubiquitin 4

1.2e-64

80.52

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY
         VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG +
Subjt:  RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGATCTTTGTCAAAACCCTAACGGGGAAGACGATCACGCTCGAGGTCGAGAGCAGTGATACCATTGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCC
TCCTGACCAGCAGAGACTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAATCAACCCTTCACCTCGTCTTGAGGCTTA
GGGGAGGTACTATGATTAAGGTCAAGACTCTGACTGGGAAGGAAATTGAGATTGACATTGAGCCAACCGACACAATTGATCGTGTCAAGGAGAGGGTGGAGGAGAAAGAG
GGGATTCCCCCTGTACAGCAAAGGCTGATTTATGCCGGCAAACAGCTAGCAGATGACAAGACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTCGTGCT
CGCCCTGAGGGGTGGTGGTTACCTGTAA

mRNA sequence

Show/hide mRNA sequence

CGGATTTTGCCCAATTTTGTCGACACTTGGTTCTTTTGTTATCTTTGTCCATTTTTTTCTCTCTCGCTCTGTTTACTTAAAACGCGGGAAGGAAAGCGATGCAGATCTTT
GTCAAAACCCTAACGGGGAAGACGATCACGCTCGAGGTCGAGAGCAGTGATACCATTGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCA
GAGACTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAATCAACCCTTCACCTCGTCTTGAGGCTTAGGGGAGGTACTA
TGATTAAGGTCAAGACTCTGACTGGGAAGGAAATTGAGATTGACATTGAGCCAACCGACACAATTGATCGTGTCAAGGAGAGGGTGGAGGAGAAAGAGGGGATTCCCCCT
GTACAGCAAAGGCTGATTTATGCCGGCAAACAGCTAGCAGATGACAAGACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTCGTGCTCGCCCTGAGGGG
TGGTGGTTACCTGTAAAAGCATTTATCTATCACATCCTGAAATTCTGAATTTTCAGTTTTATTTTGTTGGCGTGGATTAATGGAAAATATTTGAGCCCAAGCTTACTTTA
TTAATTACTCAGTTATTCCCAAAGTTCTTCAATTTTTCATTGGGGGAATCATGCTTAATTTATCCTGGTTGTTATACTTTCATTTTTATGGATCCTCTCCTGTCTATGAC
TCGCGCTTGTGATACAGGCGCGTGTTTGGTCGTCCTTCTCCAGGTGCGCTTCATACTCTTTTCTTTTCTCTTATTATAACGGATAGTACTAGAGATAGATAATTA

Protein sequence

Show/hide protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKE
GIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGGYL

CmoCh20G003010 (gene) of Cucurbita moschata (Rifu) v1 genome