; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G003190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G003190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUPF0678 fatty acid-binding protein-like protein
Genome locationCmo_Chr20:1555027..1558172
RNA-Seq ExpressionCmoCh20G003190
SyntenyCmoCh20G003190
Gene Ontology termsNA
InterPro domainsIPR012674 - Calycin
IPR014878 - THAP4-like, heme-binding beta-barrel domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010458.1 UPF0678 fatty acid-binding protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-8599.39Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG-KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG-KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        EVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
Subjt:  EVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

XP_022943798.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita moschata]1.4e-86100Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

XP_022986194.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucurbita maxima]4.6e-8598.17Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPP+PAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATG TSLQ HLKASLTKV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

XP_023512065.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp. pepo]7.0e-8699.39Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQ HLKASLTKV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

XP_038900799.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Benincasa hispida]1.8e-8193.29Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPP PAPLSIHPAV PLSFLLGTWRG+GDGGFPTINSFSYGEE+HFSHSGKPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEEKVI LQSE+VGNASKVKEISR FKLVDGELSY+VQMATGLTSLQ HLKA LTKV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

TrEMBL top hitse value%identityAlignment
A0A0A0KAL2 DUF1794 domain-containing protein4.0e-7990Show/hide
Query:  MDGELP------PVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQ
        MDGELP      P PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSGKPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQ
Subjt:  MDGELP------PVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQ

Query:  STGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        STGLVEVQKGTYNAEEKVI LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQ HLKA LTKV
Subjt:  STGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

A0A1S3C440 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X15.3e-7991.57Show/hide
Query:  MDGELPP--VPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGL
        MDGELPP   PAP SIHPAV PLSFLLGTWRGKGDGGFPTINSFSYGEE+HFSHSGKPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGL
Subjt:  MDGELPP--VPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGL

Query:  VEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VEVQKGT+NAEEKVI LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQ HLKA LTKV
Subjt:  VEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

A0A6J1D7N5 UPF0678 fatty acid-binding protein-like protein At1g792601.9e-7688.41Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPP  AP SIHPAVAPLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSGKPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEE  I LQSE+VGNASKVKEI+R FKLVDG+LSYVVQMATG TSLQ HLKA L+KV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

A0A6J1FXD9 UPF0678 fatty acid-binding protein-like protein At1g792606.9e-87100Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

A0A6J1JFE2 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X22.2e-8598.17Show/hide
Query:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
        MDGELPP+PAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE
Subjt:  MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVE

Query:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATG TSLQ HLKASLTKV
Subjt:  VQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

SwissProt top hitse value%identityAlignment
A0PT73 UPF0678 fatty acid-binding protein-like protein MUL_33602.6e-2741.77Show/hide
Query:  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE
        P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +    P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A  
Subjt:  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE

Query:  KVIMLQ--SEVVG---NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTK
         VI ++  +  +G    A +V  +SR+F++V  ELSY ++M      LQ HL A L +
Subjt:  KVIMLQ--SEVVG---NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTK

A0R6J8 UPF0678 fatty acid-binding protein-like protein MSMEG_6574/MSMEI_63967.7e-2742.41Show/hide
Query:  LSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWR-PKPDGTIEVVIAQSTGLVEVQKGTYN-AE
        + +HP +APL+ LLGTW G G G +PTI SF Y EEI F H GKP ++Y Q+T   D   P+HAE GY R P PD  +E V+A  TG+ E+Q+GT     
Subjt:  LSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWR-PKPDGTIEVVIAQSTGLVEVQKGTYN-AE

Query:  EKVIM-LQSEVVG---NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTK
        +++ M +++  +G   +A  V  ++R+F++   EL+Y +QM      LQ HL A+L +
Subjt:  EKVIM-LQSEVVG---NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTK

B2HLY1 UPF0678 fatty acid-binding protein-like protein MMAR_19951.6e-2741.77Show/hide
Query:  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE
        P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +    P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A  
Subjt:  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE

Query:  KVIMLQ--SEVVG---NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTK
         VI ++  +  +G    A +V  +SR+F++V  ELSY ++M      LQ HL A L +
Subjt:  KVIMLQ--SEVVG---NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTK

O64527 UPF0678 fatty acid-binding protein-like protein At1g792601.8e-6072.22Show/hide
Query:  GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQ
        GE PPV      HP VAPLS+LLGTWRG+G+G +PTI SF YGEEI FSHSGKPVI+Y+QKTWKL+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQ
Subjt:  GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQ

Query:  KGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        KGTYN +E+ I L+S++VGNASKVKEISR F+LVDG+LSYVV+M+T    LQ HLKA L K+
Subjt:  KGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV

Q73W27 UPF0678 fatty acid-binding protein-like protein MAP_2833c2.9e-2640.38Show/hide
Query:  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE
        P  +HP +A L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y    
Subjt:  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE

Query:  KVIMLQSEVVG-----NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASL
         +I ++          +A +V  ++R F++   ELSY VQM      LQ HL A L
Subjt:  KVIMLQSEVVG-----NASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASL

Arabidopsis top hitse value%identityAlignment
AT1G79260.1 CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.3e-6172.22Show/hide
Query:  GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQ
        GE PPV      HP VAPLS+LLGTWRG+G+G +PTI SF YGEEI FSHSGKPVI+Y+QKTWKL+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQ
Subjt:  GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQ

Query:  KGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV
        KGTYN +E+ I L+S++VGNASKVKEISR F+LVDG+LSYVV+M+T    LQ HLKA L K+
Subjt:  KGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCC
CACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGC
ACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAG
AAAGTGATAATGCTCCAAAGTGAAGTTGTAGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGC
TACTGGCTTAACCAGTCTTCAACAACACTTGAAAGCCTCGCTTACTAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCC
CACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGC
ACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAG
AAAGTGATAATGCTCCAAAGTGAAGTTGTAGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGC
TACTGGCTTAACCAGTCTTCAACAACACTTGAAAGCCTCGCTTACTAAAGTTTGA
Protein sequenceShow/hide protein sequence
MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE
KVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV