; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G003690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G003690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S18
Genome locationCmo_Chr20:1815132..1818300
RNA-Seq ExpressionCmoCh20G003690
SyntenyCmoCh20G003690
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001648 - Ribosomal protein S18
IPR036870 - Ribosomal protein S18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570652.1 hypothetical protein SDJN03_29567, partial [Cucurbita argyrosperma subsp. sororia]1.6e-14399.25Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGD GNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGE PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

KAG7010502.1 rpsR [Cucurbita argyrosperma subsp. argyrosperma]1.5e-14198.5Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDGE PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

XP_022943865.1 uncharacterized protein LOC111448465 [Cucurbita moschata]3.7e-145100Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

XP_022986919.1 uncharacterized protein LOC111484513 [Cucurbita maxima]2.3e-14297.75Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        M TVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE+KDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDG HPLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

XP_023512473.1 uncharacterized protein LOC111777218 [Cucurbita pepo subsp. pepo]1.7e-14298.5Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLG GLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDG +PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

TrEMBL top hitse value%identityAlignment
A0A6J1D4R9 uncharacterized protein LOC1110170036.5e-12788.19Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDD-KGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLY
        MRTVQ ALR+LGGGLS+RFKQ S+LR+LSTNAAR++GFDD K KPDSFESADDFERRIFGGVS  DSGN+AFFEKLDR+GKPRER+GSRLSGGNNFQ+LY
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDD-KGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLY

Query:  GLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGII
        GLDD LNTLSDGMDGKLKKA+TYFEFD EEI+KDDYTFRADMSFKPGSTYE+KDLDL KPGVRKPPKRVEFQVTTEEVL+KADFRNVRFLANFITDAGII
Subjt:  GLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS
         KRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTK+FVFGKTMEDLDKDYEYEVFDN    D  HPLGS
Subjt:  IKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS

A0A6J1FYC1 uncharacterized protein LOC1114484651.8e-145100Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

A0A6J1G586 uncharacterized protein LOC111451027 isoform X11.5e-12888.89Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MR VQVA RT+GGG++R+FKQPS LRNLSTNAARD  FDD+GK +SFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        ++DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE+KDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGII 
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS
        KRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTME LDKDYEYEVF+NN   D   P GS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS

A0A6J1JHF0 uncharacterized protein LOC1114845131.1e-14297.75Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        M TVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE+KDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDG HPLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS

A0A6J1KYL3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114999121.4e-12187.4Show/hide
Query:  RTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYGLDDNLNTL
        RT+GGG++R+FKQPS LRNLSTNAARD  FDD+GK +SFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG++DNLNTL
Subjt:  RTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYGLDDNLNTL

Query:  SDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRIS
        SDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE+KDLDLTKPGVRK PKRVEF V TEEVLR ADFRNVRFLANFITDAGII KRSKT IS
Subjt:  SDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRIS

Query:  AKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS
        AKAQRKVAREIKTARAFGLMP TTMGTKSFVFGKTME LDKDYEYEVF+NN   D   P GS
Subjt:  AKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS

SwissProt top hitse value%identityAlignment
C1CXK0 30S ribosomal protein S181.6e-0537.84Show/hide
Query:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        G ++P  PK   F +   E+    D+++V+ L  F++D G I+ R +T +SAK QR++A+ IK AR   L+P+T
Subjt:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

P62659 30S ribosomal protein S181.9e-0640.54Show/hide
Query:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        K   R+P ++ + + T  E     D+RNV  L  F+++ G I+ R +T +SAK QR +A+ IK AR  GL+PFT
Subjt:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

P80382 30S ribosomal protein S185.5e-0639.19Show/hide
Query:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        K   R+P ++ + + T  E     D+RNV  L  F+++ G I+ R +T +S K QR +A+ IK AR  GL+PFT
Subjt:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

Q5SLQ0 30S ribosomal protein S181.9e-0640.54Show/hide
Query:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        K   R+P ++ + + T  E     D+RNV  L  F+++ G I+ R +T +SAK QR +A+ IK AR  GL+PFT
Subjt:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

Q9RY50 30S ribosomal protein S181.6e-0537.84Show/hide
Query:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        G ++P  PK   F +   E+    D+++V+ L  F++D G I+ R +T +SAK QR++A+ IK AR   L+P+T
Subjt:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

Arabidopsis top hitse value%identityAlignment
AT1G07210.1 Ribosomal protein S181.0e-4744.78Show/hide
Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERI-------GSRLSGGN
        M   + A R+L      R  +P V R+L+TNA      D      SF+S+D+ +  +FG  +  D  ++ FF+ L +  K +          GSR SGG 
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERI-------GSRLSGGN

Query:  NFQSLYGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKP-PKRVEFQVTTEEVLRKADFRNVRFLANF
        +       D+  +  SDG+DGKLK+A+  +  D  +  K +Y+FR D +    +++ + +    +  ++ P     + +VTTEEVL+ ADFRNVRFLANF
Subjt:  NFQSLYGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKP-PKRVEFQVTTEEVLRKADFRNVRFLANF

Query:  ITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNND
        IT+AGIIIKR +T ISAKAQRK+AREIKTARAFGLMPFTTMGTK+F FGKTME+ D+D+EYEV D++D
Subjt:  ITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTGTTCAGGTTGCTTTGCGAACCCTTGGTGGAGGCTTATCGCGGAGATTTAAGCAACCTTCTGTGCTCAGAAACCTCTCCACAAACGCCGCTCGTGACAGTGG
CTTTGATGATAAGGGAAAACCTGATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGAATATTCGGGGGTGTTTCTACGGGCGATTCCGGAAATGATGCTTTCTTTGAGA
AGCTTGATAGAATTGGCAAACCTCGTGAAAGAATAGGTTCGCGACTGAGTGGAGGAAACAATTTTCAGTCGCTGTATGGGCTTGATGATAATCTTAACACGCTATCAGAT
GGGATGGATGGCAAGTTGAAGAAAGCTTCCACTTATTTTGAGTTTGATACCGAGGAAATTGCAAAAGACGATTATACATTCAGAGCAGATATGTCTTTTAAGCCTGGATC
AACATACGAAGTCAAGGATCTGGATCTAACGAAGCCAGGTGTACGCAAACCTCCGAAAAGGGTTGAGTTTCAGGTGACAACTGAGGAGGTCTTAAGAAAAGCTGATTTCA
GGAATGTTAGGTTTCTGGCAAACTTTATTACCGACGCCGGGATCATTATCAAGAGGAGCAAGACCCGAATTAGTGCCAAGGCACAGAGGAAAGTTGCGCGCGAGATCAAA
ACTGCACGGGCATTTGGCTTAATGCCCTTCACGACAATGGGAACCAAATCATTTGTTTTTGGAAAAACCATGGAGGATCTTGATAAGGACTATGAGTATGAAGTTTTCGA
CAACAATGATGGAGAACACCCGCTCGGATCCTAG
mRNA sequenceShow/hide mRNA sequence
AAGAGCAACCCTACGGGATTCAATTCAAACTTCGGTTTCATTTCAAGCTTTCGCATCCAGTGGTCTTCCTCTTCTTAGGCTCTGCTAATTTTCGTTCTGTGCGAAATGAG
AACTGTTCAGGTTGCTTTGCGAACCCTTGGTGGAGGCTTATCGCGGAGATTTAAGCAACCTTCTGTGCTCAGAAACCTCTCCACAAACGCCGCTCGTGACAGTGGCTTTG
ATGATAAGGGAAAACCTGATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGAATATTCGGGGGTGTTTCTACGGGCGATTCCGGAAATGATGCTTTCTTTGAGAAGCTT
GATAGAATTGGCAAACCTCGTGAAAGAATAGGTTCGCGACTGAGTGGAGGAAACAATTTTCAGTCGCTGTATGGGCTTGATGATAATCTTAACACGCTATCAGATGGGAT
GGATGGCAAGTTGAAGAAAGCTTCCACTTATTTTGAGTTTGATACCGAGGAAATTGCAAAAGACGATTATACATTCAGAGCAGATATGTCTTTTAAGCCTGGATCAACAT
ACGAAGTCAAGGATCTGGATCTAACGAAGCCAGGTGTACGCAAACCTCCGAAAAGGGTTGAGTTTCAGGTGACAACTGAGGAGGTCTTAAGAAAAGCTGATTTCAGGAAT
GTTAGGTTTCTGGCAAACTTTATTACCGACGCCGGGATCATTATCAAGAGGAGCAAGACCCGAATTAGTGCCAAGGCACAGAGGAAAGTTGCGCGCGAGATCAAAACTGC
ACGGGCATTTGGCTTAATGCCCTTCACGACAATGGGAACCAAATCATTTGTTTTTGGAAAAACCATGGAGGATCTTGATAAGGACTATGAGTATGAAGTTTTCGACAACA
ATGATGGAGAACACCCGCTCGGATCCTAGACACCATGCTTTTAGATGGTTTGTGAATTATTTCCCTCACCCTTGTCTTTGATCCAACCATTATCTCAAACATTACATGAC
TGAACTTGTTCTGATTGCTGATTATCATCCTGCCTCAAGTCCCCAGAGTCCATCTTGCAAATTTGTTCATGCAGGAAGATATTTCAAAAACTTAATAGTCATAGCCTTCT
CATCGAGATATTCTTAAATTTTGTTTTATATATTGAATTTCTGGTTAGGAGCCATATACTATAATTTGCGTATTTGTTTTTCTTCTACGGTATATTATGTATCGATGAGG
TAACTCATCAGCCATAAATTGGAACAGTTTGTTAGTTTTCCTCCATTGACGTGTTAGGCAGAATAAAATGATGGCTGCTTTTGTTTCGAATCAATGGCATATTAACAGAA
CACTGGAG
Protein sequenceShow/hide protein sequence
MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYGLDDNLNTLSD
GMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIK
TARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNNDGEHPLGS