; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G004180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G004180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor PCL1
Genome locationCmo_Chr20:1984641..1985507
RNA-Seq ExpressionCmoCh20G004180
SyntenyCmoCh20G004180
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044841 - Transcription factor LUX/BOA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570688.1 Transcription factor BOA, partial [Cucurbita argyrosperma subsp. sororia]1.7e-15698.26Show/hide
Query:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
        MEKKRECRFGDGNGCIN DERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
Subjt:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM

Query:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
        IESDEVINLDEL SDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
Subjt:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY

Query:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMM YSMGAHGHGLSH+GM MVNLSTVPTHSCSTKGQHN
Subjt:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

KAG7010535.1 Transcription factor LUX, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-14597.43Show/hide
Query:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
        MEKKRECRFGDGNGCIN DERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
Subjt:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM

Query:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
        IESDEVINLDEL SDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
Subjt:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY

Query:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVN
        RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMM YSMGAHGHGLSH+GM M +
Subjt:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVN

XP_022944629.1 transcription factor LUX-like isoform X1 [Cucurbita moschata]7.6e-160100Show/hide
Query:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
        MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
Subjt:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM

Query:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
        IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
Subjt:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY

Query:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
Subjt:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

XP_022944630.1 transcription factor LUX-like isoform X2 [Cucurbita moschata]1.9e-131100Show/hide
Query:  ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALAR
        ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALAR
Subjt:  ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALAR

Query:  TLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAP
        TLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAP
Subjt:  TLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAP

Query:  SPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        SPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
Subjt:  SPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

XP_023511812.1 transcription factor PCL1-like isoform X1 [Cucurbita pepo subsp. pepo]4.3e-15597.22Show/hide
Query:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
        MEK RECRFGDGNGCINGDERVFQWEDGLPD EKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
Subjt:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM

Query:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
        IESDEVIN+DEL SDSRKLRRIDCFKEANSAPRGES IEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
Subjt:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY

Query:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMM YSMGAHGHGLSHTGM MVNLSTVPTHSCSTKGQH+
Subjt:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

TrEMBL top hitse value%identityAlignment
A0A0A0KH89 HTH myb-type domain-containing protein4.2e-12479.59Show/hide
Query:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI
        +KKRE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI DV SASK TILNI DGQSEGYR FE  YDQTR ED  M+
Subjt:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI

Query:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR
        ESDE IN D+L SDSRKLRR+DC +E N APR ES IEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM++MNVEGLTRENVASHLQKYR
Subjt:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR

Query:  LYLKRTQPSSTTDEA------TQNSHDSAP-SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        LYLKRTQ SSTTDEA      TQN+HDS+P +ADS GN YFP+TFP+TY PSPMMPMM Y MGAHGHGLS T M MVNL+ VPTHSCSTKGQH+
Subjt:  LYLKRTQPSSTTDEA------TQNSHDSAP-SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

A0A1S3CKP6 transcription factor PCL18.0e-12379.25Show/hide
Query:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI
        +KKRE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI DV SASK TI+NI DGQSEGYR FE  YDQTR ED  M+
Subjt:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI

Query:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR
        ESDE IN D+L SDSRKLRR+DC +E N APR ES IEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM++MNVEGLTRENVASHLQKYR
Subjt:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR

Query:  LYLKRTQPSSTTDEA------TQNSHDSAPS-ADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        LYLKRTQ SSTTDEA      TQN+HDS+PS ADS GN  FP+TFPMTY P PMMPMM Y MGAHGHGLS T M MVNL+ VPTHSCSTKGQH+
Subjt:  LYLKRTQPSSTTDEA------TQNSHDSAPS-ADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

A0A5D3CU36 Transcription factor PCL18.0e-12379.25Show/hide
Query:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI
        +KKRE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI DV SASK TI+NI DGQSEGYR FE  YDQTR ED  M+
Subjt:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI

Query:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR
        ESDE IN D+L SDSRKLRR+DC +E N APR ES IEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM++MNVEGLTRENVASHLQKYR
Subjt:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR

Query:  LYLKRTQPSSTTDEA------TQNSHDSAPS-ADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        LYLKRTQ SSTTDEA      TQN+HDS+PS ADS GN  FP+TFPMTY P PMMPMM Y MGAHGHGLS T M MVNL+ VPTHSCSTKGQH+
Subjt:  LYLKRTQPSSTTDEA------TQNSHDSAPS-ADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

A0A6J1FX19 transcription factor LUX-like isoform X13.7e-160100Show/hide
Query:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
        MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM
Subjt:  MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAM

Query:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
        IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY
Subjt:  IESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKY

Query:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
Subjt:  RLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

A0A6J1FYS4 transcription factor LUX-like isoform X29.4e-132100Show/hide
Query:  ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALAR
        ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALAR
Subjt:  ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALAR

Query:  TLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAP
        TLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAP
Subjt:  TLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAP

Query:  SPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
        SPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
Subjt:  SPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

SwissProt top hitse value%identityAlignment
O22210 Transcription factor MYBC16.1e-2738.06Show/hide
Query:  QWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRID
        +WE+ LP  E+L P+SQ+L++  LA AF+I    H        + +TT +       +  +        T      M+ SD                   
Subjt:  QWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRID

Query:  CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSS----------TT
         F   +S   G  SI     ARTLKRPR+ WTPQLHKRFVD V HLG+K A PK IM+LM+VEGLTRENVASHLQKYRLYL+R Q  +           +
Subjt:  CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSS----------TT

Query:  DEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS-MGAH
        D AT     S+P          P+ F    +P  +MP + +S MG H
Subjt:  DEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS-MGAH

Q940D0 Two-component response regulator ARR12.3e-1839.38Show/hide
Query:  QSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKA
        Q + +RG       + GEDA    S  V   +  RS SRK       K+     +G+   EDA+    LK+PRV W+ +LH++FV  V+ LG+++A PK 
Subjt:  QSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKA

Query:  IMRLMNVEGLTRENVASHLQKYRLYLKR----TQPSSTTDEATQNSHDSAPSADSQGNGY
        I+ LMNV GLTRENVASHLQKYR+YL+R    +Q     + +     D++    S  NG+
Subjt:  IMRLMNVEGLTRENVASHLQKYRLYLKR----TQPSSTTDEATQNSHDSAPSADSQGNGY

Q94DH3 Transcription factor PCL12.3e-3442.19Show/hide
Query:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI
        E   E   G G      DERV +WE GLP A++LTPLSQ LV   LA+AFRI  EP R++ DV  AS  T+  +    S     F     +  G  A   
Subjt:  EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMI

Query:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR
        ES                           A  G  +  ++    + KR R+ WTPQLHKRFV+VV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYR
Subjt:  ESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR

Query:  LYLKRTQ--------PS----STTDEATQNSHDSAPS
        LY+KR Q        PS    ++T     + HD  PS
Subjt:  LYLKRTQ--------PS----STTDEATQNSHDSAPS

Q9LTH4 Transcription factor BOA1.5e-3847.73Show/hide
Query:  DGNGCINGDE-RVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINL
        DG     GDE R+ +WE GLP+ + LTPLSQ LV   LA AF ++ E  R+I DV  AS+ T+ ++                  R    A    +EV++ 
Subjt:  DGNGCINGDE-RVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINL

Query:  DELR---SDSRKLRRID----CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRL
         E     SD +K ++ D       E ++A  G+S  EDA+  +T KRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYRL
Subjt:  DELR---SDSRKLRRID----CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRL

Query:  YLKRTQPSSTTDEATQNSHD
        YLKR Q   TT+E   +S D
Subjt:  YLKRTQPSSTTDEATQNSHD

Q9SNB4 Transcription factor LUX5.3e-3942.96Show/hide
Query:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS
        ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ ++  G S        N           +E ++ +      S
Subjt:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS

Query:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK
        DS+K +  +   +         A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYRLYLK
Subjt:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK

Query:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH
        R Q      PS      S+T    Q+  D      S GN   P   P  Y    MM M +Y+  MG  G+
Subjt:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH

Arabidopsis top hitse value%identityAlignment
AT3G10760.1 Homeodomain-like superfamily protein2.7e-3041.15Show/hide
Query:  QWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIE--SDEVINLDELRSDSRKLRR
        +WE+ LP  E+L P+SQSL+S +LA AF I    H                   G     +    ++ QT     + ++  S +  +  E  +DS  L  
Subjt:  QWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIE--SDEVINLDELRSDSRKLRR

Query:  IDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSST-----TDEA
                    G         ARTLKRPR+ WTPQLHKRFVD V+HLG+K A PK IM+LM+V+GLTRENVASHLQKYRLYLKR Q  S+     +D A
Subjt:  IDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSST-----TDEA

Query:  TQNSHDSAP
        T     S+P
Subjt:  TQNSHDSAP

AT3G46640.1 Homeodomain-like superfamily protein3.8e-4042.96Show/hide
Query:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS
        ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ ++  G S        N           +E ++ +      S
Subjt:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS

Query:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK
        DS+K +  +   +         A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYRLYLK
Subjt:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK

Query:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH
        R Q      PS      S+T    Q+  D      S GN   P   P  Y    MM M +Y+  MG  G+
Subjt:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH

AT3G46640.2 Homeodomain-like superfamily protein3.8e-4042.96Show/hide
Query:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS
        ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ ++  G S        N           +E ++ +      S
Subjt:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS

Query:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK
        DS+K +  +   +         A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYRLYLK
Subjt:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK

Query:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH
        R Q      PS      S+T    Q+  D      S GN   P   P  Y    MM M +Y+  MG  G+
Subjt:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH

AT3G46640.3 Homeodomain-like superfamily protein3.8e-4042.96Show/hide
Query:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS
        ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ ++  G S        N           +E ++ +      S
Subjt:  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRS

Query:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK
        DS+K +  +   +         A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYRLYLK
Subjt:  DSRKLRRIDCFKE---------ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLK

Query:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH
        R Q      PS      S+T    Q+  D      S GN   P   P  Y    MM M +Y+  MG  G+
Subjt:  RTQ------PS------STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYS--MGAHGH

AT5G59570.1 Homeodomain-like superfamily protein1.1e-3947.73Show/hide
Query:  DGNGCINGDE-RVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINL
        DG     GDE R+ +WE GLP+ + LTPLSQ LV   LA AF ++ E  R+I DV  AS+ T+ ++                  R    A    +EV++ 
Subjt:  DGNGCINGDE-RVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINL

Query:  DELR---SDSRKLRRID----CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRL
         E     SD +K ++ D       E ++A  G+S  EDA+  +T KRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNVEGLTRENVASHLQKYRL
Subjt:  DELR---SDSRKLRRID----CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRL

Query:  YLKRTQPSSTTDEATQNSHD
        YLKR Q   TT+E   +S D
Subjt:  YLKRTQPSSTTDEATQNSHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGAGAGAGTGCCGATTTGGTGATGGTAATGGTTGTATAAATGGCGATGAAAGAGTTTTTCAGTGGGAGGATGGCCTCCCCGACGCAGAAAAATTA
ACGCCTCTTTCTCAATCGCTGGTATCGCAGGAACTGGCTTCGGCGTTCAGGATTTTGATGGAACCTCATCGGAGTATATCTGATGTTAAGTCGGCGTCGAAGACG
ACGATATTGAATATTTGCGACGGACAATCGGAAGGATACAGAGGTTTCGAGCTTAATTACGATCAGACGCGGGGGGAAGACGCCGCGATGATTGAATCGGACGAG
GTGATAAATCTAGATGAGTTGAGATCCGATTCGCGGAAATTGAGGAGGATTGATTGTTTTAAAGAGGCAAATTCTGCGCCTCGGGGGGAGAGCTCGATCGAGGAT
GCGGCATTGGCTCGAACCTTGAAGCGGCCGAGGGTTGCATGGACTCCGCAATTGCACAAACGGTTCGTGGACGTGGTTTCTCATCTAGGGCTCAAAGAAGCAGCT
CCCAAAGCCATTATGCGATTGATGAATGTCGAGGGATTGACTCGCGAGAACGTTGCCAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACACAACCATCC
TCAACGACTGACGAGGCGACACAGAACTCACATGATTCTGCTCCCAGTGCCGATTCACAAGGAAACGGCTATTTTCCATCTACTTTTCCGATGACTTATGCGCCA
TCTCCGATGATGCCTATGATGTTATATAGTATGGGAGCTCACGGCCACGGTCTTAGTCATACAGGCATGCTGATGGTTAACCTGAGCACTGTACCGACCCACTCG
TGTAGCACGAAAGGGCAGCATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGAGAGAGTGCCGATTTGGTGATGGTAATGGTTGTATAAATGGCGATGAAAGAGTTTTTCAGTGGGAGGATGGCCTCCCCGACGCAGAAAAATTA
ACGCCTCTTTCTCAATCGCTGGTATCGCAGGAACTGGCTTCGGCGTTCAGGATTTTGATGGAACCTCATCGGAGTATATCTGATGTTAAGTCGGCGTCGAAGACG
ACGATATTGAATATTTGCGACGGACAATCGGAAGGATACAGAGGTTTCGAGCTTAATTACGATCAGACGCGGGGGGAAGACGCCGCGATGATTGAATCGGACGAG
GTGATAAATCTAGATGAGTTGAGATCCGATTCGCGGAAATTGAGGAGGATTGATTGTTTTAAAGAGGCAAATTCTGCGCCTCGGGGGGAGAGCTCGATCGAGGAT
GCGGCATTGGCTCGAACCTTGAAGCGGCCGAGGGTTGCATGGACTCCGCAATTGCACAAACGGTTCGTGGACGTGGTTTCTCATCTAGGGCTCAAAGAAGCAGCT
CCCAAAGCCATTATGCGATTGATGAATGTCGAGGGATTGACTCGCGAGAACGTTGCCAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACACAACCATCC
TCAACGACTGACGAGGCGACACAGAACTCACATGATTCTGCTCCCAGTGCCGATTCACAAGGAAACGGCTATTTTCCATCTACTTTTCCGATGACTTATGCGCCA
TCTCCGATGATGCCTATGATGTTATATAGTATGGGAGCTCACGGCCACGGTCTTAGTCATACAGGCATGCTGATGGTTAACCTGAGCACTGTACCGACCCACTCG
TGTAGCACGAAAGGGCAGCATAATTGA
Protein sequenceShow/hide protein sequence
MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE
VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPS
STTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN