; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G004190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G004190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:1986050..1986586
RNA-Seq ExpressionCmoCh20G004190
SyntenyCmoCh20G004190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605444.1 hypothetical protein SDJN03_02761, partial [Cucurbita argyrosperma subsp. sororia]9.6e-1478.57Show/hide
Query:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        +R SI RLHA SEETLASESA LVEKS+EI S    GVST+ISVLLFVAF+GLS+LTIGVIYIAVTD LQ
Subjt:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

KAG7010536.1 hypothetical protein SDJN02_27330, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-3084.54Show/hide
Query:  RMSHVHRPYLATSTLSPTNISRSETSPAESSKRISIWRLHATSEETLASESATLVEKSKEIVSGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        ++  +  P+ ++STLSPTNISRSE+SPAESSKRISIWRLHATSEETLASESA LVEKSKEIVSGVSTV SVLLFVAFIGLSILTIGVIYIAVTD LQ
Subjt:  RMSHVHRPYLATSTLSPTNISRSETSPAESSKRISIWRLHATSEETLASESATLVEKSKEIVSGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]9.6e-1478.57Show/hide
Query:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        +R SI RLHA SEETLASESA LVEKS+EI S    GVST+ISVLLFVAF+GLS+LTIGVIYIAVTD LQ
Subjt:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

XP_023007015.1 uncharacterized protein LOC111499635 [Cucurbita maxima]1.2e-1378.57Show/hide
Query:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        +R SI RLHA SEETLASESA LVEKS+EI S    GVST+ISVLLFVAF+GLS+LTIGVIYIAVTD LQ
Subjt:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

XP_038901778.1 uncharacterized protein LOC120088501 [Benincasa hispida]2.5e-1469.89Show/hide
Query:  LSPTNISRSET----SPAESS--KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        LS T  SR  T    +P   +  K ISI RLHATSE+TLAS+SA LVEKS+EIVS    GVST+ISVLLFVAFIGLSILTIGVIYIAVTD LQ
Subjt:  LSPTNISRSET----SPAESS--KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

TrEMBL top hitse value%identityAlignment
A0A1S3CM77 uncharacterized protein LOC1035020671.5e-0968.49Show/hide
Query:  KRISIWRLH-ATSEETLASESATLV-EKSKEIV-----SGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        K++S   +H ATSE+TLAS+SA LV EKS++IV      GVST+ISVLLF+AFIGLSILTIGVIYI VTD LQ
Subjt:  KRISIWRLH-ATSEETLASESATLV-EKSKEIV-----SGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

A0A5A7V864 Uncharacterized protein1.5e-0968.49Show/hide
Query:  KRISIWRLH-ATSEETLASESATLV-EKSKEIV-----SGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        K++S   +H ATSE+TLAS+SA LV EKS++IV      GVST+ISVLLF+AFIGLSILTIGVIYI VTD LQ
Subjt:  KRISIWRLH-ATSEETLASESATLV-EKSKEIV-----SGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

A0A6J1D484 uncharacterized protein LOC1110171131.0e-1377.78Show/hide
Query:  SSKRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        S++  SI RLHATSE+TLASESA LVEKS+EI S    GVST+IS LLFVAFIGLSILTIGVIYIAVTD LQ
Subjt:  SSKRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

A0A6J1G6G9 uncharacterized protein LOC1114511984.6e-1478.57Show/hide
Query:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        +R SI RLHA SEETLASESA LVEKS+EI S    GVST+ISVLLFVAF+GLS+LTIGVIYIAVTD LQ
Subjt:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

A0A6J1L1T3 uncharacterized protein LOC1114996356.1e-1478.57Show/hide
Query:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ
        +R SI RLHA SEETLASESA LVEKS+EI S    GVST+ISVLLFVAF+GLS+LTIGVIYIAVTD LQ
Subjt:  KRISIWRLHATSEETLASESATLVEKSKEIVS----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29180.1 unknown protein8.7e-0543.24Show/hide
Query:  KRISIWRLHAT----SEETLASESATLVEKSKEIVS-----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLL
        ++  +WR+ AT    S+E ++S+S++    S  +VS     GV+ +I VLLFVAF+ L++LTIGV+YI VT+ L
Subjt:  KRISIWRLHAT----SEETLASESATLVEKSKEIVS-----GVSTVISVLLFVAFIGLSILTIGVIYIAVTDLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGATGAGCCATGTCCACCGCCCATATCTTGCAACCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAAACCTCTCCGGCAGAATCGTCGAAGAGAATCTCAAT
TTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCACACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTTCCACCGTAATATCTGTTCTTC
TGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAATCTACATTGCTGTGACGGACTTGTTGCAGTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGTTTTTTTTTTTTTTTCCTTTAAAAAAAATACTTTTGAATTTTAAATTTTAAAATTACTTTTTGAAATTGAAATACCGCTGGGAGCCTTGACGGCGACGAAAGATC
CGGTGGATCTGGACAGCGAGGATGCGGATGAGCCATGTCCACCGCCCATATCTTGCAACCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAAACCTCTCCGGCAGA
ATCGTCGAAGAGAATCTCAATTTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCACACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTT
CCACCGTAATATCTGTTCTTCTGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAATCTACATTGCTGTGACGGACTTGTTGCAGTAA
Protein sequenceShow/hide protein sequence
MRMSHVHRPYLATSTLSPTNISRSETSPAESSKRISIWRLHATSEETLASESATLVEKSKEIVSGVSTVISVLLFVAFIGLSILTIGVIYIAVTDLLQ