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CmoCh20G004230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G004230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:1999716..1999991
RNA-Seq ExpressionCmoCh20G004230
SyntenyCmoCh20G004230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EFH65910.1 hypothetical protein ARALYDRAFT_470775, partial [Arabidopsis lyrata subsp. lyrata]8.3e-0456.06Show/hide
Query:  PEVAAAEEEEEEGVCFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM
        P     EEEEE      D+L  N G+FEE  LVE LLE  DLDE EEE+ D    SFF+SFHFSSM
Subjt:  PEVAAAEEEEEEGVCFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM

KAE8646962.1 hypothetical protein Csa_020732, partial [Cucumis sativus]1.1e-1670.73Show/hide
Query:  MDEEEAFFWEELRRR-SEGDLPEVAAAEEEEEEGV-CFCDKLLSNGSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSS
        MDEEE FFWEELRRR S+GD P        EEEGV CF DKLLSNG+F EVLLVEPLLE  DL+EE++E  DSFFE+FHFSS
Subjt:  MDEEEAFFWEELRRR-SEGDLPEVAAAEEEEEEGV-CFCDKLLSNGSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSS

KAG6570691.1 hypothetical protein SDJN03_29606, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3895.74Show/hide
Query:  MDEEEAFFWEELRRRSEGDLPEVAAA-EEEEEEGVCFCDKLLSNGSFEEVLLVEPLLEKKDLD--EEEEEQPDSFFESFHFSSMSGGKLSPACF
        MDEEEAFFWEELRRRSEGDLPEVAAA EEEEEEGVCFCDKLLSNGSFEEVLLVEPLLEKKDLD  EEEEEQPDSFFESFHFSSMSG KLSPACF
Subjt:  MDEEEAFFWEELRRRSEGDLPEVAAA-EEEEEEGVCFCDKLLSNGSFEEVLLVEPLLEKKDLD--EEEEEQPDSFFESFHFSSMSGGKLSPACF

XP_010414437.1 PREDICTED: uncharacterized protein LOC104700597 [Camelina sativa]3.7e-0451.76Show/hide
Query:  DEEEAF--FWEELRRRSEGDLPEVAAAEEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSMS
        DEEE    F E+L    E +       EEEEEEG+    D+LL+N G F E  LVE LLE  DL+EEEEE   SFF+SFHFSS++
Subjt:  DEEEAF--FWEELRRRSEGDLPEVAAAEEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSMS

XP_020870901.1 LOW QUALITY PROTEIN: uncharacterized protein LOC9328465 [Arabidopsis lyrata subsp. lyrata]6.4e-0460.66Show/hide
Query:  EEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM
        +EEEEEG     D+L  N G+FEE  LVE LLE  DLDE EEE+ D    SFF+SFHFSSM
Subjt:  EEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM

TrEMBL top hitse value%identityAlignment
A0A0A0KBR3 Uncharacterized protein4.2e-1769.88Show/hide
Query:  MDEEEAFFWEELRRR-SEGDLPEVAAAEEEEEEGV-CFCDKLLSNGSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSM
        MDEEE FFWEELRRR S+GD P        EEEGV CF DKLLSNG+F EVLLVEPLLE  DL+EE++E  DSFFE+FHFSS+
Subjt:  MDEEEAFFWEELRRR-SEGDLPEVAAAEEEEEEGV-CFCDKLLSNGSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSM

B6REL0 Uncharacterized protein5.3e-0460.34Show/hide
Query:  EEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSMS
        EEEEEEG     ++LL+N G F E  LVE LLE  DL EEEEE   SFF+SFHFSS++
Subjt:  EEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSMS

D7KH30 Uncharacterized protein (Fragment)4.0e-0456.06Show/hide
Query:  PEVAAAEEEEEEGVCFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM
        P     EEEEE      D+L  N G+FEE  LVE LLE  DLDE EEE+ D    SFF+SFHFSSM
Subjt:  PEVAAAEEEEEEGVCFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07485.1 unknown protein7.3e-0652.46Show/hide
Query:  EEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM
        E++E+EG     D+L +N G+FEE  LVE LLE  DLDE EE++ D    SFF+S HFSS+
Subjt:  EEEEEEGV-CFCDKLLSN-GSFEEVLLVEPLLEKKDLDEEEEEQPD----SFFESFHFSSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAGGAGGCGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGAAGGGGATTTGCCAGAGGTGGCGGCGGCGGAGGAGGAGGAGGAGGAAGGAGTGTGCTTTTG
TGATAAGCTTCTTAGCAATGGTAGTTTCGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAGAAGAAAGACTTGGACGAAGAAGAAGAAGAACAACCCGATTCCTTCTTTG
AAAGCTTCCATTTTTCTTCCATGTCAGGCGGAAAATTATCTCCGGCGTGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGAGGAGGCGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGAAGGGGATTTGCCAGAGGTGGCGGCGGCGGAGGAGGAGGAGGAGGAAGGAGTGTGCTTTTG
TGATAAGCTTCTTAGCAATGGTAGTTTCGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAGAAGAAAGACTTGGACGAAGAAGAAGAAGAACAACCCGATTCCTTCTTTG
AAAGCTTCCATTTTTCTTCCATGTCAGGCGGAAAATTATCTCCGGCGTGCTTTTGA
Protein sequenceShow/hide protein sequence
MDEEEAFFWEELRRRSEGDLPEVAAAEEEEEEGVCFCDKLLSNGSFEEVLLVEPLLEKKDLDEEEEEQPDSFFESFHFSSMSGGKLSPACF