; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G004350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G004350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionflowering-promoting factor 1-like
Genome locationCmo_Chr20:2038481..2038876
RNA-Seq ExpressionCmoCh20G004350
SyntenyCmoCh20G004350
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5238222.1 flowering-promoting factor [Salix suchowensis]5.3e-5279.37Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGV RL++NPTRESFE K+PP+PGTATAPGARPRVLVYLP N VI SY ELEQRL ELGWSRY NS++P LLQFH+S DSAHLISLPK+F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDPKSS
         FK +HMYDIVVKNR FFEVRDP +S
Subjt:  KFKPMHMYDIVVKNRHFFEVRDPKSS

KAG6570697.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6898.45Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVI SYAELEQRLGELGWSRYRNSAEP+LLQFHRSHDSAHLISLPKSFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDPKSSHPS
        KFKPMHMYDIVVKNRHFFEVRDPKSSHPS
Subjt:  KFKPMHMYDIVVKNRHFFEVRDPKSSHPS

KAG6760852.1 hypothetical protein POTOM_034035 [Populus tomentosa]4.1e-5279.37Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE K+PP+PGTATAPGARPRVLVYLP N VI SY ELEQRL ELGW+RY NS +P LLQFH+S DS HLISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDPKSS
         FKP+HMYDIVVKNR FFEVRDP +S
Subjt:  KFKPMHMYDIVVKNRHFFEVRDPKSS

OMO67780.1 hypothetical protein CCACVL1_20321 [Corchorus capsularis]4.1e-5281.3Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDK GVARLISNPTRESFE KDP YPGT+TAPGARPRVLVYLPTNQVI SY+ELEQRLGELGW+RY N ++PELLQFH+S++S HLISLP++FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDP
         F+ +HMYDIVVKNR FFEVRDP
Subjt:  KFKPMHMYDIVVKNRHFFEVRDP

XP_022148408.1 flowering-promoting factor 1-like [Momordica charantia]2.2e-5889.31Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRN-SAEP-ELLQFHRSHDSAHLISLPKS
        MSGVWVFDKNGVARLI+NPTRESFE KDPPYPGTATAPGARPRVLVYLP NQVI SYAELEQRLGELGW+RYRN SAEP EL++FHRSHDSA LISLPKS
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRN-SAEP-ELLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFEVRDPKSSHPS
        FAKFKPMHMYDIVVKNRHFF+VRDPKS+  S
Subjt:  FAKFKPMHMYDIVVKNRHFFEVRDPKSSHPS

TrEMBL top hitse value%identityAlignment
A0A0A0KE84 Uncharacterized protein2.1e-6291.47Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVFDKNGVARLISNPTRESFECKDPP+PGTATAPGARPRVLVYLPTNQVI SYAELEQRL ELGW+RY N AEP+LLQFHRSHDSAHLISLPKSFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDPKSSHPS
        KFKPMHMYDIVVKNRHFF+VRDP SS  S
Subjt:  KFKPMHMYDIVVKNRHFFEVRDPKSSHPS

A0A1Q3CDF3 Uncharacterized protein3.4e-5280.16Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE K+PPYPGTATAPGARPRVLVYLP NQVI SYAELEQRL ELGW+RY N  +P LLQFH+S +SAHLISLPK+FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDPKSS
         FK +HMYDIVVKNR  FEVRDP ++
Subjt:  KFKPMHMYDIVVKNRHFFEVRDPKSS

A0A1R3HBS3 Uncharacterized protein2.0e-5281.3Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDK GVARLISNPTRESFE KDP YPGT+TAPGARPRVLVYLPTNQVI SY+ELEQRLGELGW+RY N ++PELLQFH+S++S HLISLP++FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDP
         F+ +HMYDIVVKNR FFEVRDP
Subjt:  KFKPMHMYDIVVKNRHFFEVRDP

A0A5D2K5X1 Uncharacterized protein7.5e-5279.37Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGVARLISNPTRESFE KDP YPGT+TAPGARPRVLVY PTNQVI SY+ELEQRLGELGW+RY NS +PELLQFH+S +S+HLISLP++F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRDPKSS
         F+ +HMYDIVVKNR FFEVRDP  +
Subjt:  KFKPMHMYDIVVKNRHFFEVRDPKSS

A0A6J1D405 flowering-promoting factor 1-like1.1e-5889.31Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRN-SAEP-ELLQFHRSHDSAHLISLPKS
        MSGVWVFDKNGVARLI+NPTRESFE KDPPYPGTATAPGARPRVLVYLP NQVI SYAELEQRLGELGW+RYRN SAEP EL++FHRSHDSA LISLPKS
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRN-SAEP-ELLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFEVRDPKSSHPS
        FAKFKPMHMYDIVVKNRHFF+VRDPKS+  S
Subjt:  FAKFKPMHMYDIVVKNRHFFEVRDPKSSHPS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 17.5e-2549.18Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLPT +V+ SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRD
        KF  ++MYDIVVKN ++F VRD
Subjt:  KFKPMHMYDIVVKNRHFFEVRD

O24340 Flowering-promoting factor 15.8e-2550.82Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   +              +R +V+VYLPT +VI SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLPK F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRD
        KF  ++MYDIVVKN ++F VRD
Subjt:  KFKPMHMYDIVVKNRHFFEVRD

Q0E1D7 Flowering-promoting factor 1-like protein 38.3e-2450.41Show/hide
Query:  MSGVWVFDKNGVARLISNP-TRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSF
        M+GVWVF K+G+ R + NP + ES    D          G R +VLV++P+ +V+ SY  LE+RL ELGW RY    +P LLQFH+   + HLIS+P+ F
Subjt:  MSGVWVFDKNGVARLISNP-TRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSF

Query:  AKFKPMHMYDIVVKNRHFFEVRD
        +KFK +HMYDIVVK R+ FEVRD
Subjt:  AKFKPMHMYDIVVKNRHFFEVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 14.9e-2448.39Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPE-LLQFHRSHDSAHLISLPKS
        MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP+++V+ SY  LE+ L  LGW RY +    + LLQFH+   S  LISLP+ 
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPE-LLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFEVRD
        F+KF  +HMYDIVVKN + F VRD
Subjt:  FAKFKPMHMYDIVVKNRHFFEVRD

Q9LXB5 Flowering-promoting factor 1-like protein 25.4e-2349.18Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLPT + + SY+ LEQ L  LGW RY  S + +L+Q+H+   S  LISLP+ F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRD
        KF  ++MYDIVVKN + F VRD
Subjt:  KFKPMHMYDIVVKNRHFFEVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 13.5e-2548.39Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPE-LLQFHRSHDSAHLISLPKS
        MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP+++V+ SY  LE+ L  LGW RY +    + LLQFH+   S  LISLP+ 
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPE-LLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFEVRD
        F+KF  +HMYDIVVKN + F VRD
Subjt:  FAKFKPMHMYDIVVKNRHFFEVRD

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)3.8e-2449.18Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLPT + + SY+ LEQ L  LGW RY  S + +L+Q+H+   S  LISLP+ F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRD
        KF  ++MYDIVVKN + F VRD
Subjt:  KFKPMHMYDIVVKNRHFFEVRD

AT5G24860.1 flowering promoting factor 15.3e-2649.18Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLPT +V+ SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFEVRD
        KF  ++MYDIVVKN ++F VRD
Subjt:  KFKPMHMYDIVVKNRHFFEVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCCCGTTTAATATCGAACCCAACCAGAGAGTCGTTCGAGTGCAAGGACCCGCCCTATCCAGGGACCGCGACGGC
GCCAGGGGCTCGGCCTAGAGTCCTGGTCTATCTCCCAACCAACCAAGTCATCCACTCCTACGCCGAACTCGAGCAGCGACTGGGCGAACTCGGGTGGAGCCGCTACCGGA
ATTCAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCCCATGACTCCGCCCACTTGATCTCCCTCCCCAAAAGCTTCGCCAAATTCAAGCCCATGCACATGTACGACATT
GTCGTTAAAAATCGCCATTTCTTCGAAGTTCGTGACCCCAAATCATCGCACCCTTCTATAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCCCGTTTAATATCGAACCCAACCAGAGAGTCGTTCGAGTGCAAGGACCCGCCCTATCCAGGGACCGCGACGGC
GCCAGGGGCTCGGCCTAGAGTCCTGGTCTATCTCCCAACCAACCAAGTCATCCACTCCTACGCCGAACTCGAGCAGCGACTGGGCGAACTCGGGTGGAGCCGCTACCGGA
ATTCAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCCCATGACTCCGCCCACTTGATCTCCCTCCCCAAAAGCTTCGCCAAATTCAAGCCCATGCACATGTACGACATT
GTCGTTAAAAATCGCCATTTCTTCGAAGTTCGTGACCCCAAATCATCGCACCCTTCTATAATGTGA
Protein sequenceShow/hide protein sequence
MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIHSYAELEQRLGELGWSRYRNSAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDI
VVKNRHFFEVRDPKSSHPSIM