CuGenDBv2

Gene ID	CmoCh20G004430
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	CCHC-type domain-containing protein
Genome location	Cmo_Chr20:2061251..2063565
RNA-Seq Expression	CmoCh20G004430
Synteny	CmoCh20G004430
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7010551.1 CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-154

99.06

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKS+K ASLTDSEDSSS DTRGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEEDE
        ARKRSEKRSRKHRYEEDE
Subjt:  ARKRSEKRSRKHRYEEDE

XP_022148397.1 CAX-interacting protein 4 isoform X1 [Momordica charantia]

7.5e-140

93.42

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+ S KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG
        KRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Subjt:  KRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG

Query:  RARKRSEKRSRKHRYEEDE
        RARKRSEKRSRKHR E DE
Subjt:  RARKRSEKRSRKHRYEEDE

XP_022943818.1 CAX-interacting protein 4 [Cucurbita moschata]

2.6e-156

100

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEEDE
        ARKRSEKRSRKHRYEEDE
Subjt:  ARKRSEKRSRKHRYEEDE

XP_022986903.1 CAX-interacting protein 4 [Cucurbita maxima]

2.1e-150

97.17

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRSRRRESNDSDD+RRKRRKEKHRKRDDSSDEGE IKR HRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHK K +KAASLTDS+DSSS D RGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEEDE
        ARKRSEKRSRKHRYEEDE
Subjt:  ARKRSEKRSRKHRYEEDE

XP_023511989.1 CAX-interacting protein 4 [Cucurbita pepo subsp. pepo]

5.0e-152

98.11

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVES+EESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRS RRESNDSDDSRRKRRKEK RK DDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKS+KAASLTDSEDSSS DTRGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEEDE
        ARKRSEKRSRKHRYEEDE
Subjt:  ARKRSEKRSRKHRYEEDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHA7 CCHC-type domain-containing protein

3.8e-137

91.17

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQNTASSEP+AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKG      GKG VES+EESEEEESESSDSDADSEIERIIAEREGKR SKKRSLKRKDD VDD SGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRS RR+SNDSDDSRRKRRKEKHRKRDDSSDE E  +R HRKSRKEKRRRRSHRYSDDSDSDTSEE+H RHKHKS+KAASLTDSE SSS DTRGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEED
        ARKRSEKRSRKHRYE++
Subjt:  ARKRSEKRSRKHRYEED

A0A6J1D3V6 CAX-interacting protein 4 isoform X2

1.8e-139

93.67

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+ S KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG
        KRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Subjt:  KRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG

Query:  RARKRSEKRSRKHRYE
        RARKRSEKRSRKHR E
Subjt:  RARKRSEKRSRKHRYE

A0A6J1D3Z8 CAX-interacting protein 4 isoform X1

3.6e-140

93.42

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+ S KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG
        KRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Subjt:  KRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG

Query:  RARKRSEKRSRKHRYEEDE
        RARKRSEKRSRKHR E DE
Subjt:  RARKRSEKRSRKHRYEEDE

A0A6J1FXE5 CAX-interacting protein 4

1.2e-156

100

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEEDE
        ARKRSEKRSRKHRYEEDE
Subjt:  ARKRSEKRSRKHRYEEDE

A0A6J1JHW4 CAX-interacting protein 4

1.0e-150

97.17

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKK

Query:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR
        RGRSKRRSRRRESNDSDD+RRKRRKEKHRKRDDSSDEGE IKR HRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHK K +KAASLTDS+DSSS D RGR
Subjt:  RGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR

Query:  ARKRSEKRSRKHRYEEDE
        ARKRSEKRSRKHRYEEDE
Subjt:  ARKRSEKRSRKHRYEEDE

SwissProt top hits

e value

%identity

Alignment

Q84Y18 CAX-interacting protein 4

5.0e-70

58.24

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   + QQ T     + EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKR-----TSKKRSLKRKDDLVDDGSGSD
        RNFLS K DKEKDP AI+A V+S L+K++    +G GKG VE     EEEESESSDSD DSE+ERIIAER GK+       K  S+++K   V D S SD
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKR-----TSKKRSLKRKDDLVDDGSGSD

Query:  S-----REKKRGRSKRRSRRR----ESNDSDDSRRKRRKEKH-RKRD-DSSDEG--ETIKRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHRRHKHKSQ
        S     + ++R   KR S +R    ES D ++ R KRRKE+  RKRD D SDE   E  +R  RKSRKEKRRRRS R +SDDSDS++SE+  RR K +++
Subjt:  S-----REKKRGRSKRRSRRR----ESNDSDDSRRKRRKEKH-RKRD-DSSDEG--ETIKRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHRRHKHKSQ

Query:  KAASLTDSEDSSSVDTRGR----ARKRSEKRSRKHRYEED
         AAS +DSE + S D   R    + KRSEK+SRK  + ++
Subjt:  KAASLTDSEDSSSVDTRGR----ARKRSEKRSRKHRYEED

Arabidopsis top hits

e value

%identity

Alignment

AT2G28910.1 CAX interacting protein 4

3.5e-71

58.24

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   + QQ T     + EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKR-----TSKKRSLKRKDDLVDDGSGSD
        RNFLS K DKEKDP AI+A V+S L+K++    +G GKG VE     EEEESESSDSD DSE+ERIIAER GK+       K  S+++K   V D S SD
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKR-----TSKKRSLKRKDDLVDDGSGSD

Query:  S-----REKKRGRSKRRSRRR----ESNDSDDSRRKRRKEKH-RKRD-DSSDEG--ETIKRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHRRHKHKSQ
        S     + ++R   KR S +R    ES D ++ R KRRKE+  RKRD D SDE   E  +R  RKSRKEKRRRRS R +SDDSDS++SE+  RR K +++
Subjt:  S-----REKKRGRSKRRSRRR----ESNDSDDSRRKRRKEKH-RKRD-DSSDEG--ETIKRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHRRHKHKSQ

Query:  KAASLTDSEDSSSVDTRGR----ARKRSEKRSRKHRYEED
         AAS +DSE + S D   R    + KRSEK+SRK  + ++
Subjt:  KAASLTDSEDSSSVDTRGR----ARKRSEKRSRKHRYEED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCATCGTCTTCAAGATGCCAGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACACAGTAGTGCTGCCCTACAGACGCATGGTATATGGCAAAGTGC
AATTGGGTATGACCCATATGCACCAAACAAGGATGATAACAAGAGTTCTGCACAACAAAACACAGCTAGCTCTGAACCAGAAGCAGAGAATGCATATGCTAGCTTTCAGG
GTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGTGGTGCTTGCAAGAGGTGTGGACGTGTTGGACACCTTAGTTTTCAGTGTAGGAATTTTTTG
AGTGTTAAGAATGATAAGGAGAAAGACCCAGAAGCTATCCAGGCTGATGTTATGTCGGAGCTGGATAAATTAAAAGGAAATATAGGTAAGGGAAATGGAAAAGGTGCAGT
TGAGAGTGACGAGGAGAGTGAGGAGGAAGAGAGTGAAAGCTCTGACTCGGATGCTGATTCAGAGATTGAGAGGATTATTGCTGAAAGGGAAGGGAAAAGAACTAGTAAGA
AACGGTCACTGAAAAGAAAGGATGATTTGGTTGATGATGGATCAGGTTCTGATTCAAGAGAGAAAAAGAGGGGGAGGTCAAAAAGGAGGAGCAGAAGAAGAGAATCCAAT
GACTCAGATGACAGCAGAAGGAAGAGGAGAAAGGAGAAGCACAGGAAAAGAGACGATTCATCAGATGAGGGAGAAACAATTAAGCGACGTCATAGGAAGAGTAGAAAAGA
AAAGAGAAGGAGAAGAAGCCATAGGTATTCTGATGACTCGGATTCTGACACATCTGAGGAATCTCATCGAAGGCACAAACACAAGAGTCAGAAGGCTGCATCGCTAACTG
ATTCTGAAGATAGCAGCTCTGTTGATACAAGGGGCCGAGCCAGGAAGCGCTCTGAGAAGAGAAGCAGGAAACATCGTTACGAGGAGGATGAGTAG

mRNA sequence

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Protein sequence

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MFIVFKMPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFL
SVKNDKEKDPEAIQADVMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRSLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESN
DSDDSRRKRRKEKHRKRDDSSDEGETIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGRARKRSEKRSRKHRYEEDE

CmoCh20G004430 (gene) of Cucurbita moschata (Rifu) v1 genome