; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G004650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G004650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMYB transcription factor
Genome locationCmo_Chr20:2155745..2156170
RNA-Seq ExpressionCmoCh20G004650
SyntenyCmoCh20G004650
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044676 - MYB-like transcription factor EOBI/EOBII-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CEP20211.1 MYB48 [Lilium hybrid division I]1.5e-4184.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK     LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGN S  +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

XP_022943941.1 transcription factor MYB59-like [Cucurbita moschata]1.7e-4084.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

XP_022986918.1 transcription factor MYB59-like [Cucurbita maxima]1.7e-4084.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

XP_023511995.1 myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo]1.7e-4084.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

XP_029128765.1 transcription factor MYB48 [Cajanus cajan]3.8e-4082.65Show/hide
Query:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        QE+RKGPWTEQED +L+ FVGLFGDRRWDFIAKVSGLKVAGD LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVL+LH+KWGNR   R  + LP R
Subjt:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR

TrEMBL top hitse value%identityAlignment
A0A0D6E290 MYB487.5e-4284.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK     LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGN S  +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

A0A1S3BIY1 transcription factor MYB48-like isoform X12.0e-3982.35Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

A0A218XXJ4 transcription factor MYB59 isoform X33.5e-3982.65Show/hide
Query:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        +E RKGPWTEQED+QL+CFVGLFGDRRWDFIAKVSGLKVAGD  NRTGKSCRLRWVNYLHP LKRGKMT QEERLVLELH+KWGNR   R  + LP R
Subjt:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR

A0A6J1FT29 transcription factor MYB59-like8.3e-4184.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

A0A6J1JHY1 transcription factor MYB59-like8.3e-4184.31Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

SwissProt top hitse value%identityAlignment
Q10MB4 Transcription factor MYB22.6e-2351.69Show/hide
Query:  VEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR
        V G ++R+GPWT +ED+ L+ ++   G+ RW+ +A+ +GLK       RTGKSCRLRW+NYL P L+RG +T QE+ L+LELH++WGNR
Subjt:  VEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR

Q4JL76 Myb-related protein MYBAS28.5e-3571.43Show/hide
Query:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        +EIRKGPWTEQED+QL+C V LFG+RRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRG+M+  EERL+LELH +WGNR   R  + LP R
Subjt:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR

Q4JL84 Transcription factor MYB593.8e-3574.49Show/hide
Query:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Subjt:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR

Q53NK6 Myb-related protein MYBAS11.6e-3367.35Show/hide
Query:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        +E+RKGPWTEQED+QL+C V LFGDRRWDF+AKVSG       LNRTGKSCRLRWVNYLHPGLK G+M+ +EE L++ELH +WGNR   R  + LP R
Subjt:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR

Q9LX82 Transcription factor MYB485.0e-3572.55Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

Arabidopsis top hitse value%identityAlignment
AT1G25340.1 myb domain protein 1161.8e-2454Show/hide
Query:  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        EG E RKGPWT +ED  L  ++   G+ RW+ +AK SGLK       R GKSCRLRW+NYL P +KRG +T QE+ L+LELH+KWGNR   +  K LP R
Subjt:  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR

AT2G47190.1 myb domain protein 23.7e-2554.55Show/hide
Query:  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR
        E  ++RKGPWTE+ED  L+ FV + GD RW+ IA+ SGLK       RTGKSCRLRW+NYL P ++RG +T +E+ ++L+LH+ WGNR
Subjt:  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR

AT3G24310.1 myb domain protein 3055.3e-2459.04Show/hide
Query:  RKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR
        RKGPWT +ED  LI +V L G+ RW+ +A+++GLK       R GKSCRLRWVNYL P LKRG++T  EE ++LELH KWGNR
Subjt:  RKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNR

AT3G46130.1 myb domain protein 483.6e-3672.55Show/hide
Query:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP
        M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP
Subjt:  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLP

Query:  SR
         R
Subjt:  SR

AT5G59780.3 myb domain protein 592.7e-3674.49Show/hide
Query:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR
        +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSG       LNRTGKSCRLRWVNYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Subjt:  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAA
AGTTTCAGGTTTGAAGGTGGCGGGAGACAGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAGAGAGGCAAGATGACTG
CTCAAGAAGAACGACTCGTGCTTGAACTTCACAACAAATGGGGAAACAGGTCTATCCCTAGAACTATGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAA
AGTTTCAGGTTTGAAGGTGGCGGGAGACAGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAGAGAGGCAAGATGACTG
CTCAAGAAGAACGACTCGTGCTTGAACTTCACAACAAATGGGGAAACAGGTCTATCCCTAGAACTATGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCTTGA
Protein sequenceShow/hide protein sequence
MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSRRVLKP