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CmoCh20G004740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G004740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNudix hydrolase domain-containing protein
Genome locationCmo_Chr20:2197403..2201496
RNA-Seq ExpressionCmoCh20G004740
SyntenyCmoCh20G004740
Gene Ontology termsGO:0052751 - GDP-mannose hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6503099.1 hypothetical protein ZIOFF_035389 [Zingiber officinale]2.5e-0971.43Show/hide
Query:  FCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
        F FP+   AD S+CCQH+SSPL NGAI ETSDGKI++LQRS NV EFPG
Subjt:  FCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
KAG6506486.1 hypothetical protein ZIOFF_031810 [Zingiber officinale]2.5e-0971.43Show/hide
Query:  FCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
        F FP+   AD S+CCQH+SSPL NGAI ETSDGKI++LQRS NV EFPG
Subjt:  FCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
KAG6570735.1 3-ketoacyl-CoA synthase 12, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2889.61Show/hide
Query:  PLCNGAIAETSDGKIVLLQRSSNVDEFPGGHLEE-LYTSAQDESAQLYTVSLVKRDAVWKLKQRSLSGHERTTRDSN
        PLCNGAIAETSDGKIVLL+RS+NVDEFPGGHLE  L  +AQDESAQLYTV LVKRDAVWKLKQRSLSGHERTTRDSN
Subjt:  PLCNGAIAETSDGKIVLLQRSSNVDEFPGGHLEE-LYTSAQDESAQLYTVSLVKRDAVWKLKQRSLSGHERTTRDSN
KAG7010579.1 Nudix hydrolase 9 [Cucurbita argyrosperma subsp. argyrosperma]8.7e-2696.61Show/hide
Query:  MVYLQVFCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHLE
        MVYLQVFCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLL+RS+NVDEFPGGHLE
Subjt:  MVYLQVFCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHLE
XP_042393096.1 nudix hydrolase 9-like [Zingiber officinale]2.5e-0971.43Show/hide
Query:  FCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
        F FP+   AD S+CCQH+SSPL NGAI ETSDGKI++LQRS NV EFPG
Subjt:  FCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
TrEMBL top hitse value%identityAlignment
A0A0A0KET8 Nudix hydrolase domain-containing protein1.8e-0862.9Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDE------FPGGHLE--ELYTSAQDES
        D SI CQHSSSPL NGAI ETSDGKIVLL+RS+NV E      FPGGH E  EL   + D++
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDE------FPGGHLE--ELYTSAQDES
A0A5A7V3T1 Nudix hydrolase 9 isoform X11.8e-0862.9Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDE------FPGGHLE--ELYTSAQDES
        D SI CQHSSSPL NGAI ETSDGKIVLL+RS+NV E      FPGGH E  EL   + D++
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDE------FPGGHLE--ELYTSAQDES
A0A5D3DKU4 Nudix hydrolase 9 isoform X11.8e-0862.9Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDE------FPGGHLE--ELYTSAQDES
        D SI CQHSSSPL NGAI ETSDGKIVLL+RS+NV E      FPGGH E  EL   + D++
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDE------FPGGHLE--ELYTSAQDES
A0A6J1CXQ6 nudix hydrolase 9 isoform X28.0e-0980Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
        D  ICCQH++SPL NGAI ETSDGKIVLLQRS+NV EFPG
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
A0A6J1CY79 nudix hydrolase 9 isoform X18.0e-0980Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
        D  ICCQH++SPL NGAI ETSDGKIVLLQRS+NV EFPG
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPG
SwissProt top hitse value%identityAlignment
Q8VYR2 Nudix hydrolase 92.2e-0860.47Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHL
        D S+ C+H+SSPL NGA+ ETSD KI++L+RS+NV EFPG ++
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHL
Arabidopsis top hitse value%identityAlignment
AT3G46200.1 nudix hydrolase homolog 91.6e-0960.47Show/hide
Query:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHL
        D S+ C+H+SSPL NGA+ ETSD KI++L+RS+NV EFPG ++
Subjt:  DHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTATTTGCAAGTATTTTGCTTTCCAAATTGTTTTCCTGCAGATCACTCAATCTGTTGTCAACATTCCTCAAGTCCTCTGTGTAACGGTGCCATTGCGGAGACTTC
AGATGGGAAAATTGTTTTGTTGCAAAGGAGTAGCAATGTTGATGAATTTCCAGGAGGCCATCTAGAGGAACTGTATACCAGTGCACAAGATGAGTCTGCTCAACTTTATA
CAGTTTCATTGGTGAAGAGAGACGCGGTATGGAAGTTGAAACAGAGAAGCTTAAGTGGACATGAAAGGACGACTAGAGATTCAAACTAA
mRNA sequenceShow/hide mRNA sequence
GCGGATCGCGTTAGTTTCAATAATTAGAAGTCCAATTCCATTATTAGTGAATTTGTTTTCAATTATATCAATCATAAAATTTGCAAATTTATTTCTATTGGTGGCTAATA
GATAAGGGCACGATAATAATCAGAACTTTGTGATTATTCGAGCCATTTTTGTCCACTACTGATTTTTCTCATATTCCTTAGTTCTTGCGAACTATTTATGCTGCCATGGA
ATAGTTCAACTTATAACCTTGTTCATTCTAGAAACTAAATGCAAGAGAATCCATATTCTCTGGAAGTTAAGTCACAAACCCATTGAAATTGTATGGTTTATTTGCAAGTA
TTTTGCTTTCCAAATTGTTTTCCTGCAGATCACTCAATCTGTTGTCAACATTCCTCAAGTCCTCTGTGTAACGGTGCCATTGCGGAGACTTCAGATGGGAAAATTGTTTT
GTTGCAAAGGAGTAGCAATGTTGATGAATTTCCAGGAGGCCATCTAGAGGAACTGTATACCAGTGCACAAGATGAGTCTGCTCAACTTTATACAGTTTCATTGGTGAAGA
GAGACGCGGTATGGAAGTTGAAACAGAGAAGCTTAAGTGGACATGAAAGGACGACTAGAGATTCAAACTAAAGCAACTAGGATTAATCCAAGCAGGAAGGTATGCCTTGT
ATCTCAATTATCTTTCATGGCATTAAACGTGCTAGATTATTTGTTTATGCCTTGATTTTTTATTAAAAAAATGGGTCGAATATCACTAAGAATCTTCCTTTTCTGTCATG
TCATTTTTACTTTGACAAAAAAAGGTTCAGTAGGTCTATCTATTTATCAGCATCAACCAATAAAAACAGACCAAATATAAAAGGAAGAATTCCTACTTATTTATGGCAGT
AACTATTTTGAGTCCATGATCTTTCTTTCTCATATTTTGTTGGCATAATTACATTTTCATGCGGTTGATGAGATTATTGAGAGTGAGCCCCACATTGGTTAATTTAGTTA
ATTTAGTGGAAGATCATCGATTTATAAGCGAGGAATACTATCTCCATATAAGGACTTTTGGAGAAGTCCAAAACAAAGCTACGAAAGCTTATAGTCAGAGTGGACAATAT
CATATGTGAAAAGTCGTGATTCCTAACAAGAACACACTTCTCTATAGGTTTAATACTGTGGACATGTCGGTCAATACACTAGGAGTTATAGCAATGGATTGTCAAAGCAG
ATGGATTAATTTTTTTTCTTCTTAAGAAAATGTAAGCATTTGACTATCCTCTAAGCCCATCATTTATCATCACCCATGTGAAGACTAGTTTCTATAGCTCAAGGACGACA
ATTTCATCCCTTCCCATGGTAAATAACCCATACAAATAAGTCATGCTGTAAATGTCAAAACTTGATCGATTAAAATTGGTAGGTGGTTGACTCTTGAAAGTGATAGATAA
AAAAAAGGATGGCAGCAGTTGTTTACTTTTGTGCATTATTAAAGCAATCTACCACTGTGAAAATTGAACTGCCTCAAGTTTCGAAAGTGACCGTTTTGGTTTCTCACACA
GAGGTTAAGACGATTGGATGAAAATAAAGCAACCTTTGTTGGCCAAGTCCACAGTCAACAACCCATTACTGGATTTTTAACATTTGTGGACTTTTCTTTCCCCCATCCTT
TTATTTTATTTCTTAAATTAACATAATGTCTATTTGTTGATGAGCATGGAGGGCCCCACATGGGCAAGTCACTTCGTCTTCATGTGAAGTATATTGGCCCAAATTCGAAG
AACAACCGAGCTCGCCACACGTGAGGTTAGTTGCCTTTAAAAGATTCCTTTTACATTACGCGTGTAACGCACCAATTGAGGATCCCATTTGTTTTCATTTTTATTCCTTT
TTATAGAATACAACTTGTGTCTTAACTAATTAAAAAAAAAATTCAAACATACTTTTTAAAATCATCTAATTTCTATTAAATATATAATGTTTTACGACTTTAATAGTACT
TGATAGGCTCACTCATTAATTTTGTC
Protein sequenceShow/hide protein sequence
MVYLQVFCFPNCFPADHSICCQHSSSPLCNGAIAETSDGKIVLLQRSSNVDEFPGGHLEELYTSAQDESAQLYTVSLVKRDAVWKLKQRSLSGHERTTRDSN