; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G005130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationCmo_Chr20:2456641..2457497
RNA-Seq ExpressionCmoCh20G005130
SyntenyCmoCh20G005130
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0061025 - membrane fusion (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570774.1 Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5195.73Show/hide
Query:  MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKK
        MKKKQYSN+FYLH+SASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIR AAVAMNA+VRRKK
Subjt:  MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKK

Query:  ARLMDEVPKLCKLARKK
        ARLMDEVPKLCKLA KK
Subjt:  ARLMDEVPKLCKLARKK

KAG7010621.1 Syntaxin-71, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-8297.08Show/hide
Query:  MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKK
        MKKKQYSNHFYLH+SASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELE HAALQIR AAVAMNA+VRRKK
Subjt:  MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKK

Query:  ARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLS
        ARLMDEVPKLCKLA KKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLS
Subjt:  ARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLS

XP_011657220.1 syntaxin-71 isoform X1 [Cucumis sativus]9.5e-5275.82Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVDS+C++Y+KYDV+KQRELNAYGD  F+RLFAAVELEIHAALQ          R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EELEV DDLVLAL+E+IKAIPD +TSGAK SGGW SS+SSNNIKFD S   +F
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

XP_023512260.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]2.2e-6477.96Show/hide
Query:  KQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNA
        KQYSNHFYLHISASFFLLPLFFISL  AKIT+IDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ         IR AAVAMNA
Subjt:  KQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNA

Query:  QVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHFRWKL
        +VRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIP                           GFTHFRWKL
Subjt:  QVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHFRWKL

XP_031743863.1 syntaxin-71 isoform X2 [Cucumis sativus]9.5e-5275.82Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVDS+C++Y+KYDV+KQRELNAYGD  F+RLFAAVELEIHAALQ          R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EELEV DDLVLAL+E+IKAIPD +TSGAK SGGW SS+SSNNIKFD S   +F
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

TrEMBL top hitse value%identityAlignment
A0A0A0KFY5 t-SNARE coiled-coil homology domain-containing protein4.6e-5275.82Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVDS+C++Y+KYDV+KQRELNAYGD  F+RLFAAVELEIHAALQ          R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EELEV DDLVLAL+E+IKAIPD +TSGAK SGGW SS+SSNNIKFD S   +F
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

A0A1S3CKB8 syntaxin-71 isoform X22.5e-5075.16Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVDS+C++YEKYDV KQRELNAYGD  F+RLFAAVE EIHAALQ          R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EELEV DDLVLAL+E+IKAIPD  TSGAK SGGW SS+S NNIKFD S   +F
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

A0A1S3CKC3 syntaxin-71 isoform X12.5e-5075.16Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVDS+C++YEKYDV KQRELNAYGD  F+RLFAAVE EIHAALQ          R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EELEV DDLVLAL+E+IKAIPD  TSGAK SGGW SS+S NNIKFD S   +F
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

A0A6J1CFN2 syntaxin-71-like1.6e-4973.86Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVD++CQ+Y+KYDV+KQRELNAYGD VF+RLFAAVELEI AAL         + R +AVAMNA+VRRKKARLMDEVPKL KLARKKVKGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EEL V  DLVLAL+ERIKAIPD +TS  KQSGGWASS+SS NIKFD S   +F
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

A0A6J1K481 syntaxin-71-like2.4e-4875.16Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID+IFRVDS+C++YEKYDV+KQRELNAYGD VF+RL+AAVELEI AALQ          R AAVAMNA+VRRKKARLMDEVPKL KLARKK+KGVPK
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF
        EELEV  DLVLAL+ERIKAIPD ST+G K SGGWAS+ SSNNIKFD +   HF
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF

SwissProt top hitse value%identityAlignment
Q94KK5 Syntaxin-735.7e-3151.39Show/hide
Query:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE
        VIDLI RVDS+C++YEKYD+ +QR+ N  GD  FSRL++AVE  +   LQ          +  AVAMNA++RR KARL++ +PKL +L+ KKVKG+ KEE
Subjt:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE

Query:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFD
        L+  +DLVL+L+++I+AIP+   S A   GGW +S S +NI+FD
Subjt:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFD

Q94KK6 Syntaxin-723.3e-3152.7Show/hide
Query:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE
        VID+IFRVD +C++Y+KYD+ K RE+ A GD  FSRLF +++ +I A L         + R AAVAMNA+VRR KARL ++V KL KLA KK+KG+ +EE
Subjt:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE

Query:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGG-W-ASSASSNNIKFDLS
         E   DLV+AL +R++AIPD +  GAKQ+   W  +SA + NIKFD+S
Subjt:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGG-W-ASSASSNNIKFDLS

Q9SF29 Syntaxin-718.7e-3252.32Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID++ RVDS+C++Y+KYDV KQRE N  GD  F+RL+ A E +I  AL+          R AAVAMNA++RR KARL +EVPKL +LA K+VKG+  
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGW--ASSASSNNIKFDLSG
        EEL   +DLVLAL  RI+AIPD +  G K +  W  +S+ S  +IKFD  G
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGW--ASSASSNNIKFDLSG

Arabidopsis top hitse value%identityAlignment
AT3G09740.1 syntaxin of plants 716.2e-3352.32Show/hide
Query:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK
        +TVID++ RVDS+C++Y+KYDV KQRE N  GD  F+RL+ A E +I  AL+          R AAVAMNA++RR KARL +EVPKL +LA K+VKG+  
Subjt:  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPK

Query:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGW--ASSASSNNIKFDLSG
        EEL   +DLVLAL  RI+AIPD +  G K +  W  +S+ S  +IKFD  G
Subjt:  EELEVGDDLVLALQERIKAIPDRSTSGAKQSGGW--ASSASSNNIKFDLSG

AT3G45280.1 syntaxin of plants 722.4e-3252.7Show/hide
Query:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE
        VID+IFRVD +C++Y+KYD+ K RE+ A GD  FSRLF +++ +I A L         + R AAVAMNA+VRR KARL ++V KL KLA KK+KG+ +EE
Subjt:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE

Query:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGG-W-ASSASSNNIKFDLS
         E   DLV+AL +R++AIPD +  GAKQ+   W  +SA + NIKFD+S
Subjt:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGG-W-ASSASSNNIKFDLS

AT3G61450.1 syntaxin of plants 734.0e-3251.39Show/hide
Query:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE
        VIDLI RVDS+C++YEKYD+ +QR+ N  GD  FSRL++AVE  +   LQ          +  AVAMNA++RR KARL++ +PKL +L+ KKVKG+ KEE
Subjt:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE

Query:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFD
        L+  +DLVL+L+++I+AIP+   S A   GGW +S S +NI+FD
Subjt:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFD

AT3G61450.2 syntaxin of plants 734.0e-3251.39Show/hide
Query:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE
        VIDLI RVDS+C++YEKYD+ +QR+ N  GD  FSRL++AVE  +   LQ          +  AVAMNA++RR KARL++ +PKL +L+ KKVKG+ KEE
Subjt:  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEE

Query:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFD
        L+  +DLVL+L+++I+AIP+   S A   GGW +S S +NI+FD
Subjt:  LEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAACAATACTCCAACCATTTCTATCTCCACATTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACTGTAATCGA
TCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTG
CCGTTGAACTCGAAATCCATGCCGCTCTTCAGATTAGGACTGCTGCAGTTGCGATGAATGCCCAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTT
TGTAAATTGGCTCGCAAGAAGGTTAAAGGTGTTCCGAAAGAAGAGCTCGAAGTCGGAGATGATCTTGTTCTTGCGCTTCAAGAGAGGATTAAAGCGATACCAGATAGGAG
TACCTCAGGAGCCAAGCAATCTGGAGGATGGGCGTCCTCCGCCTCATCTAACAATATCAAATTTGATTTATCAGGTTTTACGCACTTTAGATGGAAACTTTGA
mRNA sequenceShow/hide mRNA sequence
GGAGAGAAGAGGTTTTCATGGTTGTCCAAAATGAAGAAGAAACAATACTCCAACCATTTCTATCTCCACATTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTC
CCTCGCCTATGCCAAGATCACTGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATG
GTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGATTAGGACTGCTGCAGTTGCGATGAATGCCCAGGTTCGACGGAAGAAG
GCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCGCAAGAAGGTTAAAGGTGTTCCGAAAGAAGAGCTCGAAGTCGGAGATGATCTTGTTCTTGCGCTTCA
AGAGAGGATTAAAGCGATACCAGATAGGAGTACCTCAGGAGCCAAGCAATCTGGAGGATGGGCGTCCTCCGCCTCATCTAACAATATCAAATTTGATTTATCAGGTTTTA
CGCACTTTAGATGGAAACTTTGAGAGCGAGTATTTCCAGCAAAGTGAAGAATCAAGTCAATTTCGAAACGAGTATGACATGCGGAAGATGAAACGGGCCTG
Protein sequenceShow/hide protein sequence
MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKKARLMDEVPKL
CKLARKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHFRWKL