; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G005140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA polymerase epsilon subunit C
Genome locationCmo_Chr20:2458626..2461596
RNA-Seq ExpressionCmoCh20G005140
SyntenyCmoCh20G005140
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570775.1 Chromatin accessibility complex 16kD protein, partial [Cucurbita argyrosperma subsp. sororia]9.3e-10295.09Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTH--NNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKK
        MASSKKSSSEAKS+EAGTSKPAP NKTH  NNNARTIDKVYSKKKKVSN+NKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN GKK
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTH--NNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKK

Query:  EQNGYV-----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
        EQNGYV     EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
Subjt:  EQNGYV-----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

KAG7010622.1 Chromatin accessibility complex protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-10395.09Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
        MASSKKSSSEAKS+EAGTSKPAP NKTHNNNARTIDKVYSKKKKVSN+NKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN GKKEQ
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ

Query:  NGYV-------EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
        NGYV       EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
Subjt:  NGYV-------EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

XP_022944557.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita moschata]4.3e-107100Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
        MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ

Query:  NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL
        NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL
Subjt:  NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL

Query:  KFEDALKERSMAESGKD
        KFEDALKERSMAESGKD
Subjt:  KFEDALKERSMAESGKD

XP_022986059.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima]2.8e-9891.67Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTH------NNNARTIDKVYSKKKKV-SNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR
        MASSKKSSSEAKSKEAGTSKPAP NKTH      NNNAR +DKVYSKKKKV SN+NKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNTSKSKKVKR
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTH------NNNARTIDKVYSKKKKV-SNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR

Query:  NRGKKEQNGYV----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY
        N GKKE+NGY     EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY
Subjt:  NRGKKEQNGYV----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY

Query:  DFLSDFVPEKLKFEDALKERSMAESGKD
        DFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  DFLSDFVPEKLKFEDALKERSMAESGKD

XP_023512055.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-9791.23Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTH---NNNARTIDKVYSKKKKVS---NSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN
        MASSKKSSSEAKSKEAGTSKPAP NKTH   NNNARTIDKVYSKKKKVS   N+NKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNT+KSKKVKRN
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTH---NNNARTIDKVYSKKKKVS---NSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN

Query:  RGKKEQNGYVEEEE-----EAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY
         GKKE+NGY EEEE     E EEE EEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY
Subjt:  RGKKEQNGYVEEEE-----EAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY

Query:  DFLSDFVPEKLKFEDALKERSMAESGKD
        DFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  DFLSDFVPEKLKFEDALKERSMAESGKD

TrEMBL top hitse value%identityAlignment
A0A1S3CKU7 DNA polymerase epsilon subunit C2.2e-7778.76Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNS-NKHTSNGSVKENEVLPISAPGD--------AEEDRAETTSKSPNTSKSKKV
        MASSKKSS+EAK KEAGTSKPAP  KTH NNAR  DK  SKKKK     +  T+NGSVK+NEVL +S PG         A+ED+AETTS+   TSKSKKV
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNS-NKHTSNGSVKENEVLPISAPGD--------AEEDRAETTSKSPNTSKSKKV

Query:  KRNRGKKEQNGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDF
        KRN  K+E NGY EEE   EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV KRKRYDF
Subjt:  KRNRGKKEQNGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDF

Query:  LSDFVPEKLKFEDALKERSMAESGKD
        LSDFVPEKLKFEDALKERSMAESGKD
Subjt:  LSDFVPEKLKFEDALKERSMAESGKD

A0A6J1FVY8 DNA polymerase epsilon subunit C-like isoform X12.1e-107100Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
        MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ

Query:  NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL
        NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL
Subjt:  NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL

Query:  KFEDALKERSMAESGKD
        KFEDALKERSMAESGKD
Subjt:  KFEDALKERSMAESGKD

A0A6J1FY58 DNA polymerase epsilon subunit C-like isoform X21.7e-85100Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
        MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ

Query:  NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
        NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
Subjt:  NGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL

A0A6J1JCZ8 DNA polymerase epsilon subunit C-like isoform X21.1e-7690Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTH------NNNARTIDKVYSKKKKV-SNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR
        MASSKKSSSEAKSKEAGTSKPAP NKTH      NNNAR +DKVYSKKKKV SN+NKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNTSKSKKVKR
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTH------NNNARTIDKVYSKKKKV-SNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR

Query:  NRGKKEQNGYV----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
        N GKKE+NGY     EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
Subjt:  NRGKKEQNGYV----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL

A0A6J1JF10 DNA polymerase epsilon subunit C-like isoform X11.4e-9891.67Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTH------NNNARTIDKVYSKKKKV-SNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR
        MASSKKSSSEAKSKEAGTSKPAP NKTH      NNNAR +DKVYSKKKKV SN+NKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNTSKSKKVKR
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTH------NNNARTIDKVYSKKKKV-SNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR

Query:  NRGKKEQNGYV----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY
        N GKKE+NGY     EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY
Subjt:  NRGKKEQNGYV----EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRY

Query:  DFLSDFVPEKLKFEDALKERSMAESGKD
        DFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  DFLSDFVPEKLKFEDALKERSMAESGKD

SwissProt top hitse value%identityAlignment
Q8LCG7 Nuclear transcription factor Y subunit C-24.2e-0426.61Show/hide
Query:  YVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKF
        +  + +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P     
Subjt:  YVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKF

Query:  EDALKERSM
         D LKE  +
Subjt:  EDALKERSM

Q9JKP8 Chromatin accessibility complex protein 14.4e-0631.82Show/hide
Query:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK
        E+  ++++   P++RI+ IM+       INQEAL L  KATE+F+      +Y   +   KK+L Y  L+S     +   FL+D +P+K+   K+   LK
Subjt:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK

Query:  ERSMAESGKD
        E+   E   +
Subjt:  ERSMAESGKD

Q9NRG0 Chromatin accessibility complex protein 12.6e-0632.08Show/hide
Query:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK
        ++  E+++   P++RI+ IM+       INQEAL L  KATE+F+      +Y   +   KK L Y  L++   + + + FL+D +P+K+   K+   LK
Subjt:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK

Query:  ERSMAE
        E    E
Subjt:  ERSMAE

Q9V452 Chromatin accessibility complex 16kD protein3.4e-0635Show/hide
Query:  PMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLK---FEDALKERSMAESGKD
        P++R++ IM+       I  E LFL+ K TE+F+      AY     Q   ++L Y+HLS VV K K  +FL   VP+K++   F++ L+    A S  D
Subjt:  PMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLK---FEDALKERSMAESGKD

Q9XE33 Nuclear transcription factor Y subunit C-68.4e-0528.57Show/hide
Query:  QNGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP
        QN + E+  E E   + K +  P+ RIKKIM+ +     I  EA  +  +A EMF+++     +A   ++++++L    +++ + + + +DFL D VP
Subjt:  QNGYVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C108.6e-2138.91Show/hide
Query:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ
        M SSKK   +    +   +K +  +K  +          S+ KK SN      N   K+ E+  IS    +  D  E   +     KS  V   RG  + 
Subjt:  MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQ

Query:  NGYVEEEEEAEEE----AEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFV
         G   +  +  EE    AE+   KFPMNRI++IMR +NS  +I Q+A+FLVNKATEMF+ +F ++AY    +D+KK + YKHLSSVV   +RY+FL+D V
Subjt:  NGYVEEEEEAEEE----AEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFV

Query:  PEKLKFEDALK--ERSMAESG
        PEKLK E AL+  ER M ++G
Subjt:  PEKLKFEDALK--ERSMAESG

AT1G56170.1 nuclear factor Y, subunit C23.0e-0526.61Show/hide
Query:  YVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKF
        +  + +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P     
Subjt:  YVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKF

Query:  EDALKERSM
         D LKE  +
Subjt:  EDALKERSM

AT1G56170.2 nuclear factor Y, subunit C23.0e-0526.61Show/hide
Query:  YVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKF
        +  + +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P     
Subjt:  YVEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKF

Query:  EDALKERSM
         D LKE  +
Subjt:  EDALKERSM

AT5G63470.1 nuclear factor Y, subunit C45.0e-0528Show/hide
Query:  EEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED
        + +E E+  + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ + +   +DFL D VP E++K E+
Subjt:  EEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED

AT5G63470.2 nuclear factor Y, subunit C45.0e-0528Show/hide
Query:  EEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED
        + +E E+  + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ + +   +DFL D VP E++K E+
Subjt:  EEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTCCAAAAAATCCAGTAGTGAAGCCAAGAGCAAAGAAGCGGGAACTTCAAAACCAGCCCCCAACAACAAGACCCACAACAACAACGCCAGAACAATCGACAA
GGTTTATTCAAAGAAGAAGAAGGTTAGCAACAGCAACAAGCACACTAGCAATGGCTCTGTGAAGGAGAACGAGGTGTTACCCATTTCTGCTCCAGGCGATGCCGAAGAAG
ACAGAGCAGAAACCACGAGTAAATCGCCTAACACCTCCAAATCGAAGAAAGTTAAACGGAACCGTGGAAAGAAAGAACAGAATGGTTATGTAGAAGAAGAAGAAGAAGCA
GAAGAAGAAGCTGAGGAGAAGATTTACAAATTCCCTATGAATCGGATCAAGAAAATCATGAGGGATGAGAATTCTGATTTGCGCATAAATCAGGAAGCTTTGTTTCTCGT
CAACAAAGCAACGGAGATGTTTCTTGTGCAATTTTGCAAGGATGCATATGCGTGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATCTATCATCAGTAGTTT
GCAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTCCCAGAGAAATTAAAATTTGAAGATGCATTGAAGGAAAGAAGCATGGCAGAATCAGGAAAAGACTAG
mRNA sequenceShow/hide mRNA sequence
TGCCCCGGGAGCTGGGGAAGTGAAAGTCGCTAAAATCGGCCGAGCGCAGTAAATAGAGTCCCAGATGCAGGCCAGATAGAGCATCAATTCTTCAGTGCGAGCACGCTGTA
TGTTCTATACCGAGTACTCAGTAAATTATAGACCACTGCAAATCTGCGGGGAAGAAGGCGCAAATCCTTCTTTCATTTGTTGAGTCAAAAGGACATTAAAATCCCCCCTC
ATCTAAGGACGATGACTTGCCAGTGTGTAGGTTCTTGGTGAAAAAGGACCCGTAGTTCCCCCAAATTCTCAAACACCGATCTTTAACCATGGCTTCGTCCAAAAAATCCA
GTAGTGAAGCCAAGAGCAAAGAAGCGGGAACTTCAAAACCAGCCCCCAACAACAAGACCCACAACAACAACGCCAGAACAATCGACAAGGTTTATTCAAAGAAGAAGAAG
GTTAGCAACAGCAACAAGCACACTAGCAATGGCTCTGTGAAGGAGAACGAGGTGTTACCCATTTCTGCTCCAGGCGATGCCGAAGAAGACAGAGCAGAAACCACGAGTAA
ATCGCCTAACACCTCCAAATCGAAGAAAGTTAAACGGAACCGTGGAAAGAAAGAACAGAATGGTTATGTAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCTGAGGAGAAGA
TTTACAAATTCCCTATGAATCGGATCAAGAAAATCATGAGGGATGAGAATTCTGATTTGCGCATAAATCAGGAAGCTTTGTTTCTCGTCAACAAAGCAACGGAGATGTTT
CTTGTGCAATTTTGCAAGGATGCATATGCGTGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATCTATCATCAGTAGTTTGCAAAAGGAAGAGATACGACTT
TCTTTCAGATTTTGTCCCAGAGAAATTAAAATTTGAAGATGCATTGAAGGAAAGAAGCATGGCAGAATCAGGAAAAGACTAGGCTTTTTGATATCTTAATCTAACACTTC
ATCTTGTTCTGTGGATGTGTTGGGTTTAGGTATCTTTTTTTTGTCATGTCAATGGGAATACATGGAAGTTAGAACATTCATTTTCCCTCCGTACAGTTCTGTAAGTTTAT
TAACGACATCTCAGATCTAACATAATTAAACTATTACTTACACAGGGATCTTTTTTCTTCCTGGGCAAATCCAACAAATCTATTTGCTCAAAAGCAGAAA
Protein sequenceShow/hide protein sequence
MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNSNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNRGKKEQNGYVEEEEEA
EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD