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CmoCh20G005160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:2462167..2464745
RNA-Seq ExpressionCmoCh20G005160
SyntenyCmoCh20G005160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010621.1 Syntaxin-71, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-16100Show/hide
Query:  GWKAVANYNHLGVQIRGTSRVEMIQQTSLPSPEESECKEEFEETGQ
        GWKAVANYNHLGVQIRGTSRVEMIQQTSLPSPEESECKEEFEETGQ
Subjt:  GWKAVANYNHLGVQIRGTSRVEMIQQTSLPSPEESECKEEFEETGQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTGCTGTGCTAGTTGAGGATTCTTCAACATCGCCAGCCATCTTTAGGAAAACTACACTATACCATCTGTTATCCGATGTTAATTCAGGATGGAAGGCTGTTGC
GAATTACAATCATTTAGGTGTTCAAATTAGAGGCACTAGCAGAGTAGAGATGATACAACAAACCTCTTTGCCTTCACCAGAGGAATCTGAATGCAAGGAAGAGTTTGAAG
AGACAGGGCAAGCGCATTTCAAGCATTTTATTGATGTTGAAATGGTGAGGAAAAGAGGAAGGAAATCCACCAGTAGCCTTGTGCAATATGTAGAGGAAAGAGGAATAAAC
CAAGTTATGGAGATCCGCAAGTTTGGCCATGGTGGTGCTTTCTCCACCAGGAATAATCAGAGAAGCTACATTAAGAAGCTGCTCAGGCTTCCTTATCTCTACGCCCTTCA
CTCCGAGCCTTCTCAAAGCTGCGCGCCACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCTGCTGTGCTAGTTGAGGATTCTTCAACATCGCCAGCCATCTTTAGGAAAACTACACTATACCATCTGTTATCCGATGTTAATTCAGGATGGAAGGCTGTTGC
GAATTACAATCATTTAGGTGTTCAAATTAGAGGCACTAGCAGAGTAGAGATGATACAACAAACCTCTTTGCCTTCACCAGAGGAATCTGAATGCAAGGAAGAGTTTGAAG
AGACAGGGCAAGCGCATTTCAAGCATTTTATTGATGTTGAAATGGTGAGGAAAAGAGGAAGGAAATCCACCAGTAGCCTTGTGCAATATGTAGAGGAAAGAGGAATAAAC
CAAGTTATGGAGATCCGCAAGTTTGGCCATGGTGGTGCTTTCTCCACCAGGAATAATCAGAGAAGCTACATTAAGAAGCTGCTCAGGCTTCCTTATCTCTACGCCCTTCA
CTCCGAGCCTTCTCAAAGCTGCGCGCCACAATAACACAACAATTCATATTCATCTACAAAAGGAACTAGCAATAGCGAAGAAGAAGAAGAAGAAGAACCTGCGATGTGCT
CGTTAAAAGATCCCTGCAAAGCTAGAACGCCGACGACAGGCATGTTCGTGAATTGGAGCGTTCAGTAGACCTAGAAGGCGCCAACTCCGGCTCCGACGAAGCAGGAGAAG
GCTGTGGGAGCGATTGAGAGAGAATCAGAAACGCTTGCTGATTGAACACCTCCAACCTCTTCTTTCGAGTGGCGCTAATTTGAAGAGCCTGCCTGGCTGCAGCACAGGCG
GCTCACTTTTTGAATAATTTTCTTTCCCTA
Protein sequenceShow/hide protein sequence
MSAAVLVEDSSTSPAIFRKTTLYHLLSDVNSGWKAVANYNHLGVQIRGTSRVEMIQQTSLPSPEESECKEEFEETGQAHFKHFIDVEMVRKRGRKSTSSLVQYVEERGIN
QVMEIRKFGHGGAFSTRNNQRSYIKKLLRLPYLYALHSEPSQSCAPQ