; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G005230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCASP-like protein
Genome locationCmo_Chr20:2511842..2514397
RNA-Seq ExpressionCmoCh20G005230
SyntenyCmoCh20G005230
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006702 - Casparian strip membrane protein domain
IPR045009 - CASP-like protein 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140364.1 CASP-like protein 5A2 [Momordica charantia]2.1e-4184.48Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M+AS+ASV PVEETP TD GD APIV MK+IEGMPGTRGGLALRCFQ GFA AAF VMAASSDF SVSAFSYLVAAAGLQGLWS  LAV+DIYALLVKR+
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L NRPIV+FFAVGDGV
Subjt:  LHNRPIVTFFAVGDGV

XP_022943338.1 CASP-like protein 5A2 [Cucurbita moschata]3.1e-5399.14Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        LHNRPIVTFFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

XP_022985617.1 CASP-like protein 5A2 [Cucurbita maxima]2.0e-5295.69Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        MSASSAS+HPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFA+AAFG+MAASSDFASVSAFSYLVAAAGLQGLWSFFLAV+DIYALLVKRN
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        LHNRPIVTFFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

XP_023512454.1 CASP-like protein 5A2 [Cucurbita pepo subsp. pepo]5.3e-5398.28Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAV+DIYALLVKRN
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        LHNRPIVTFFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

XP_038900719.1 CASP-like protein 5A2 [Benincasa hispida]1.9e-4282.76Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M+ S  SVHPVEETP TDVGDVAP+V MK+IEGMPGTRGGLALR  QLGFA AAF +MAASSDF SVSAFSYLVAAA LQGLWSF LAV+DIYALLVKR 
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        LHNRPIV+FFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

TrEMBL top hitse value%identityAlignment
A0A1S3CKE0 CASP-like protein1.3e-4179.31Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M+ S  SVHPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF VMAAS DF SVSAFSYLVAAA LQGLWSF LA++DIYALLVKR 
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L NRPIV+FFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

A0A5D3CR88 CASP-like protein1.3e-4179.31Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M+ S  SVHPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF VMAAS DF SVSAFSYLVAAA LQGLWSF LA++DIYALLVKR 
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L NRPIV+FFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

A0A6J1CFI4 CASP-like protein1.0e-4184.48Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M+AS+ASV PVEETP TD GD APIV MK+IEGMPGTRGGLALRCFQ GFA AAF VMAASSDF SVSAFSYLVAAAGLQGLWS  LAV+DIYALLVKR+
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L NRPIV+FFAVGDGV
Subjt:  LHNRPIVTFFAVGDGV

A0A6J1FWR8 CASP-like protein1.5e-5399.14Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        LHNRPIVTFFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

A0A6J1JE54 CASP-like protein9.7e-5395.69Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        MSASSAS+HPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFA+AAFG+MAASSDFASVSAFSYLVAAAGLQGLWSFFLAV+DIYALLVKRN
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        LHNRPIVTFFAVGDG+
Subjt:  LHNRPIVTFFAVGDGV

SwissProt top hitse value%identityAlignment
P0DI66 CASP-like protein 5A29.1e-2455.56Show/hide
Query:  MSASSASVHPVE-ETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKR
        M AS   VHP+E   PA  V   AP V MK++ GMPGT GGL LR  QL FAA +  VM++++DFASVSAF YL+    LQ +WS  +A++DIYALLVKR
Subjt:  MSASSASVHPVE-ETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKR

Query:  NLHNRPIVTFFAVGDGV
         L NR  VT F++GDG+
Subjt:  NLHNRPIVTFFAVGDGV

P0DI68 CASP-like protein 5A19.8e-2658.62Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M AS  +VHPVE  P TD  +    V MK++ GMPGT GGL LR  Q  FA  A  VMA++SDF SV+AF YLVAA  +Q LWSF LA++DIYALLVKR 
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L NR  V  FA+GDG+
Subjt:  LHNRPIVTFFAVGDGV

P0DI70 CASP-like protein 5A14.1e-2458.62Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M+ S  +VHPV E P TDV   AP V MK+ +GMPGT GGLALR  Q  FA  AF +M ++ DF++V+AF YLVAA  LQ LWS  LAV+D YALLVKR+
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L N  +V+ F VGDGV
Subjt:  LHNRPIVTFFAVGDGV

Q10Q78 CASP-like protein 5A11.3e-2557.76Show/hide
Query:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN
        M AS  +VHPVE  P  D  +    V MK++ GMPGT GGL LR  Q  FAA A  VMA+++DF SV++F +LVAAA LQ LWSF LA++DIYALLVKR 
Subjt:  MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRN

Query:  LHNRPIVTFFAVGDGV
        L NR  V  FA+GDG+
Subjt:  LHNRPIVTFFAVGDGV

Q9SKN3 CASP-like protein 5A26.1e-2861.86Show/hide
Query:  MSASSASVHPVEETP--ATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVK
        M+ S ASVHPVE+ P  AT+V +  P V M ++EGMPGT  GLALR FQ  FAAAA  VMA++SDF SV+AF YLVAA GLQ LWS  LA++D+YA++VK
Subjt:  MSASSASVHPVEETP--ATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVK

Query:  RNLHNRPIVTFFAVGDGV
        R+L NR +V+ FA+GDGV
Subjt:  RNLHNRPIVTFFAVGDGV

Arabidopsis top hitse value%identityAlignment
AT2G28370.1 Uncharacterised protein family (UPF0497)4.3e-2961.86Show/hide
Query:  MSASSASVHPVEETP--ATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVK
        M+ S ASVHPVE+ P  AT+V +  P V M ++EGMPGT  GLALR FQ  FAAAA  VMA++SDF SV+AF YLVAA GLQ LWS  LA++D+YA++VK
Subjt:  MSASSASVHPVEETP--ATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVK

Query:  RNLHNRPIVTFFAVGDGV
        R+L NR +V+ FA+GDGV
Subjt:  RNLHNRPIVTFFAVGDGV

AT2G37200.1 Uncharacterised protein family (UPF0497)1.1e-1947.46Show/hide
Query:  MSASSASVHPVEETP-ATDVGDV-APIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVK
        M+ S  ++HPV+  P A   G +  P V MK+++GMPGT GGL LR  Q   A  +  VM  +SDF S +AF  LV A  LQ LWS  L ++D YALLV+
Subjt:  MSASSASVHPVEETP-ATDVGDV-APIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVK

Query:  RNLHNRPIVTFFAVGDGV
        R+L N  +V  F +GDGV
Subjt:  RNLHNRPIVTFFAVGDGV

AT3G23200.1 Uncharacterised protein family (UPF0497)6.7e-1449.44Show/hide
Query:  MKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGV
        M +I G PGT  GL LR  Q  FAA +   M  S  F S +AF YL+AA GLQ +WSF LA+LD +AL+ K+ L +  +V+ F VGD V
Subjt:  MKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGV

AT3G53850.1 Uncharacterised protein family (UPF0497)4.7e-1551.69Show/hide
Query:  MKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGV
        MK + G PGT  GL LR  Q   AAA+ GVM ++ +F+  +AF YL+A+ GLQ LWSF LA LD+YAL  K++L N  +V+ F VGD V
Subjt:  MKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGV

AT5G02060.1 Uncharacterised protein family (UPF0497)7.9e-1549.44Show/hide
Query:  MKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGV
        MK + G PGT  GL LR  Q   AAA+ GVM +S DF++ +AF +LVA+ GLQ +WSF LA LD+YA+  K +L +  +++ F VGD V
Subjt:  MKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCGAGCTCTGCGTCAGTTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTCGCACCGATTGTGAGTATGAAGAATATAGAGGGCATGCCCGGCAC
TCGCGGTGGTCTCGCTCTTCGCTGCTTCCAGTTAGGGTTCGCCGCTGCTGCTTTTGGTGTCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGCTACCTTG
TCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTCTTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTT
GCTGTAGGTGATGGGGTAAATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTGGACCTTTGTTCGGTGAACA
AGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGAAAGGTAACT
CGACCAAACATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ACGACTATTGTTATAAACCCTTCGTCGCCGGTCTGCGCTTCGCCGTTTCGATCGAAGAACTAACGACCTATGATTCTCCGATTCGTCCCTTCCGGCTGGATAATTCTATA
ATCAAGTGAACCAGAAAGGATTTTGAATCTTGGATTATCGGATTCGTTCGATTGCTACTGATTTTCTCTCTAGGGCGAAAAAGGGCAGGATCAGAGGGCGATTTCGGTGG
ATACCTGGGATGTGATCGACGAATTGAGGAGTGTATGTTCGAAGGAGAAATGAATTGATTGCATTGTTGGGAGAGATGAGCGCGAGCTCTGCGTCAGTTCATCCTGTGGA
GGAAACACCGGCGACCGATGTCGGAGACGTCGCACCGATTGTGAGTATGAAGAATATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCTTCCAGTTAG
GGTTCGCCGCTGCTGCTTTTGGTGTCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTT
TTCCTAGCAGTTCTTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGGTAAATCACCACCACGCTCA
CATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTGGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCA
TTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGAAAGGTAACTCGACCAAACATCAGTAAATACCCCTTCCCCTTGCA
TTCATCTTTGTTTGTTCCTTCCTACCGTCAGTTTTGTTGGGATTCTACACTTCATTTATTGAAACCTTTACATTTTCAAATACTATATATGATATTAGTTTGATGTTCTT
CATTGTTCATGATATTATTCTTGGAGGAATGTAGAATCCAGTGCTGCTGTCTTAAAAAAGGTGGATTTTTTTGTTTCTCTTCCTCTGGATGTCCTGTGCACTAATTGAAA
ATAAGAACGTTTTGTCATTATCTCTTGTGTGTATTATGGGAAAGAATCATTCCCCCGTCGTGAGTTTCATAAGCGTACATGTTTCTCAGTCTTGGATAGATCAGAACGAC
ATTCTTCTTCTTGTGGCCTTATTAGGTGAAATATTGTGAAACTCTGTCGAGTAAAGAACTACTTGTCAACTATTGTTAAG
Protein sequenceShow/hide protein sequence
MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFF
AVGDGVNHHHAHICSSMCLCGHHSPNRQRPGPLFGEQVCAASISNCNGIPLLAHHIAFIFLQLLVTCIKMKGNSTKHQ