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CmoCh20G005400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:2631131..2631448
RNA-Seq ExpressionCmoCh20G005400
SyntenyCmoCh20G005400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035234.1 hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa]4.1e-3191.67Show/hide
Query:  MAARCVPPSAPSTIVTPL-ATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT
        M ARCVPPSAPSTIV PL ATP+ AEDYETVKPQL NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Subjt:  MAARCVPPSAPSTIVTPL-ATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT

KAE8646888.1 hypothetical protein Csa_020968, partial [Cucumis sativus]7.8e-3888.46Show/hide
Query:  MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSST
        MASLFP+ F YLLFLLLLSSP+ SM ARCVPPSAPSTIV PLATP+ AE YETVKPQL NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS T
Subjt:  MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSST

Query:  TDHS
        TDHS
Subjt:  TDHS

KAF3961747.1 hypothetical protein CMV_013666 [Castanea mollissima]5.3e-1862.37Show/hide
Query:  MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGG
        M++ F +   L  LLLLSS   +MAAR +P SAPSTIV PL + EA+DY T+KP    K  VF G EVKSCLPKGFR SSAPSRFVNYH  GG
Subjt:  MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGG

KAG6570806.1 hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia]1.2e-49100Show/hide
Query:  MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDH
        MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDH
Subjt:  MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDH

Query:  SINTP
        SINTP
Subjt:  SINTP

PON66506.1 hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii]1.1e-1556.84Show/hide
Query:  LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLN-RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG----GCSST
        L Y + LLLLSS   SMA R +P SAPST+V PL T   +DY +++P LN  +  VF G E K CLPKGFR +SAPSRFVNYH  G    GCSS+
Subjt:  LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLN-RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG----GCSST

TrEMBL top hitse value%identityAlignment
A0A0A0KDD3 Uncharacterized protein9.0e-4088.79Show/hide
Query:  MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSST
        MASLFP+ F YLLFLLLLSSP+ SM ARCVPPSAPSTIV PLATP+ AE YETVKPQL NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS T
Subjt:  MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSST

Query:  TDHSINT
        TDHSINT
Subjt:  TDHSINT

A0A2P5CZN8 Uncharacterized protein (Fragment)5.3e-1656.84Show/hide
Query:  LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLN-RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG----GCSST
        L Y + LLLLSS   SMA R +P SAPST+V PL T   +DY +++P LN  +  VF G E K CLPKGFR +SAPSRFVNYH  G    GCSS+
Subjt:  LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLN-RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG----GCSST

A0A2P5FTP0 Uncharacterized protein2.6e-1555.79Show/hide
Query:  LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLN-RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG----GCSST
        L Y +  LLLSS   SMA R +P SAPST+V PL T   +DY +++P LN  +  VF G E K CLPKGFR +SAPSRFVNYH  G    GCSS+
Subjt:  LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLN-RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG----GCSST

A0A5D3DGK4 Uncharacterized protein2.0e-3191.67Show/hide
Query:  MAARCVPPSAPSTIVTPL-ATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT
        M ARCVPPSAPSTIV PL ATP+ AEDYETVKPQL NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Subjt:  MAARCVPPSAPSTIVTPL-ATPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT

A0A6A1V0C8 Uncharacterized protein3.4e-1563.75Show/hide
Query:  MAARCVPPSAPSTIVTPLATPEAEDYETVK-PQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCSSTTDH
        MAAR +P SAPSTIV PLA  EA+  ET+  P  N K  VF   EVK+CLPKG RRSSAPSR+VNYH+  S GCSST  H
Subjt:  MAARCVPPSAPSTIVTPLATPEAEDYETVK-PQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCSSTTDH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTTTTCCCATTTCTCTTTTATCTCCTCTTCTTACTTCTTCTATCTTCTCCTTCCCCATCAATGGCTGCTCGCTGCGTCCCTCCCAGCGCGCCCAGCACCAT
TGTTACGCCCCTTGCCACTCCCGAAGCGGAAGACTATGAGACCGTCAAGCCTCAGCTGAATCGGAAGAGGCTTGTTTTTGGTGGTAATGAAGTCAAAAGCTGCCTCCCTA
AAGGCTTCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTTAACTATCATACTTCTGGTGGCTGTTCTTCAACCACTGATCATTCCATTAATACGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCTTTTCCCATTTCTCTTTTATCTCCTCTTCTTACTTCTTCTATCTTCTCCTTCCCCATCAATGGCTGCTCGCTGCGTCCCTCCCAGCGCGCCCAGCACCAT
TGTTACGCCCCTTGCCACTCCCGAAGCGGAAGACTATGAGACCGTCAAGCCTCAGCTGAATCGGAAGAGGCTTGTTTTTGGTGGTAATGAAGTCAAAAGCTGCCTCCCTA
AAGGCTTCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTTAACTATCATACTTCTGGTGGCTGTTCTTCAACCACTGATCATTCCATTAATACGCCTTGA
Protein sequenceShow/hide protein sequence
MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINTP