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CmoCh20G005610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description(thale cress) hypothetical protein
Genome locationCmo_Chr20:2705798..2706745
RNA-Seq ExpressionCmoCh20G005610
SyntenyCmoCh20G005610
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570826.1 hypothetical protein SDJN03_29741, partial [Cucurbita argyrosperma subsp. sororia]6.6e-30100Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
KAG7010668.1 hypothetical protein SDJN02_27463, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-30100Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022944261.1 uncharacterized protein LOC111448766 [Cucurbita moschata]6.6e-30100Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022986414.1 uncharacterized protein LOC111484157 [Cucurbita maxima]1.9e-2998.53Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTR+NIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_023513377.1 uncharacterized protein LOC111777879 [Cucurbita pepo subsp. pepo]1.5e-2998.53Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPA+PLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
TrEMBL top hitse value%identityAlignment
A0A1S3CQB9 uncharacterized protein LOC1035030428.7e-2895.45Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A3P6EPH8 Uncharacterized protein2.8e-2692.31Show/hide
Query:  RNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RNIIVATGL+ FASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  RNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1CHR8 uncharacterized protein LOC1110110243.9e-2896.97Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1FTX8 uncharacterized protein LOC1114487663.2e-30100Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1JB19 uncharacterized protein LOC1114841579.3e-3098.53Show/hide
Query:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTR+NIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22875.1 unknown protein2.7e-2989.23Show/hide
Query:  RNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RNI+VATGL+ FASAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  RNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
AT5G22875.2 unknown protein2.7e-2989.23Show/hide
Query:  RNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RNI+VATGL+ FASAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  RNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGACGGAATATTATCGTTGCCACTGGGTTGATAGCCTTTGCATCTGCTGGATTAGCCTTTCCCTTTTACATGGCGTCTTCCAAAAAGCCAGTTATAGATCCGGC
AAAGCCACTTCCCCCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGTTCCCGGGATGTCGGACCCGACCATCAAACTTACACCAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACACGACGGAATATTATCGTTGCCACTGGGTTGATAGCCTTTGCATCTGCTGGATTAGCCTTTCCCTTTTACATGGCGTCTTCCAAAAAGCCAGTTATAGATCCGGC
AAAGCCACTTCCCCCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGTTCCCGGGATGTCGGACCCGACCATCAAACTTACACCAAGAAGTGATTTATCTTGAATG
TTGCTAATGTGCCCTGTTTCTTTTGGATGCCTACTATGTTGTGATGTTATGTGGTGGCACTCATAGTTGGGAATGCATAATGTCGGACGCCCATATACTACTTCAAACGG
TCTTTCTTTCGTTGCCGAATGATAAACATTACATAAATGAGAAAAGGATAGGGAGAGATTTGAATACATGTTTGAGTTTTATAGTTACAACTTCCACAATAATTTTGTAA
CAAACATTACGTAAGGTATCGGTTCGGAAATCTGTCTCCATTGCGATACAAGTACGATGGTCGTGTGTTTGCACAATACGCCCCTGTGACAATATCCATGTTTTGTTGAA
GGTTGGTTTGTATGGGAAAAGTCAATGCGAAAACCCGAAAGCATGGGTTTATATTTGTTTAAATCATTTTTATGGTAACATATATTA
Protein sequenceShow/hide protein sequence
MTRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK