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CmoCh20G005840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChromosome transmission fidelity protein
Genome locationCmo_Chr20:2876399..2877073
RNA-Seq ExpressionCmoCh20G005840
SyntenyCmoCh20G005840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448201.1 PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo]2.5e-2892.06Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MV FCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

XP_022140680.1 uncharacterized protein LOC111011282 [Momordica charantia]5.1e-2992.06Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVD+KRR+RRSRPAPGICSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

XP_022944461.1 uncharacterized protein LOC111448908 [Cucurbita moschata]2.7e-3098.41Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

XP_022986417.1 uncharacterized protein LOC111484159 [Cucurbita maxima]7.8e-3096.83Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQKRRI+RSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

XP_038902212.1 uncharacterized protein LOC120088840 [Benincasa hispida]1.3e-2993.65Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

TrEMBL top hitse value%identityAlignment
A0A1S3BJR8 uncharacterized protein LOC1034904651.2e-2892.06Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MV FCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

A0A6J1CFS7 uncharacterized protein LOC1110112822.5e-2992.06Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVD+KRR+RRSRPAPGICSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

A0A6J1FUH3 uncharacterized protein LOC1114489081.3e-3098.41Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

A0A6J1J7G8 uncharacterized protein LOC1114841593.8e-3096.83Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQKRRI+RSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

A0A6P6S4N3 uncharacterized protein LOC1136877972.3e-2785.71Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQ R++RRS+PA GICSRCGGGASVADMKTATRFCHVPFYWK+WRA+ICTFCG++
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein2.1e-2569.84Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQ R+++RS+PA G CSRCG  AS+ADMKT+TRFC +P YW+SWRA++C+FCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

AT2G20835.1 unknown protein1.4e-2161.9Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        M  FCFLVDQ++++R  +PA G+CSRCGGGA VADM+T+TRFC VPFY K+W+A++C  CG++
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

AT3G15534.1 unknown protein3.1e-2469.84Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL
        MVCFCFLVDQKR+++ S+PA G CSRCG GA VADMKT+TRFC +P Y +SWRA++C+FCGS+
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSL

AT4G29905.1 unknown protein4.6e-0436.54Show/hide
Query:  DQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC
        ++K  + R + APG+C  CGG  S  D++T   FC +P  +K  R   C+ C
Subjt:  DQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTTTGCTTCCTGGTGGATCAGAAGCGGAGGATACGGCGGAGTAGGCCGGCCCCTGGAATTTGCTCCAGGTGCGGCGGCGGAGCCAGTGTAGCCGACATGAA
AACCGCCACCAGATTCTGTCACGTCCCATTTTACTGGAAATCATGGAGGGCCCTCATCTGTACCTTTTGTGGATCTCTGCACCATTTTGCCGCTCACTTCAGTTGGTTCA
AGCAAATTACAAGCCACTTCGATTACGCCTTCATCATGAGCAAGAGCCATTGCTTGAACAGATGGAAGCCCGCCTCCTCGCTCGCTCACTTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGCTTTTGCTTCCTGGTGGATCAGAAGCGGAGGATACGGCGGAGTAGGCCGGCCCCTGGAATTTGCTCCAGGTGCGGCGGCGGAGCCAGTGTAGCCGACATGAA
AACCGCCACCAGATTCTGTCACGTCCCATTTTACTGGAAATCATGGAGGGCCCTCATCTGTACCTTTTGTGGATCTCTGCACCATTTTGCCGCTCACTTCAGTTGGTTCA
AGCAAATTACAAGCCACTTCGATTACGCCTTCATCATGAGCAAGAGCCATTGCTTGAACAGATGGAAGCCCGCCTCCTCGCTCGCTCACTTGCTTTGA
Protein sequenceShow/hide protein sequence
MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSLHHFAAHFSWFKQITSHFDYAFIMSKSHCLNRWKPASSLAHLL