; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G005940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G005940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:2931254..2932027
RNA-Seq ExpressionCmoCh20G005940
SyntenyCmoCh20G005940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570858.1 hypothetical protein SDJN03_29773, partial [Cucurbita argyrosperma subsp. sororia]5.7e-11898.68Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
        VGGIY KNRDNQLVGVEPSGSSQSFPISIS PKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFA MHMEDRWLRK
Subjt:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK

Query:  KPTEFAETEVRDTLRSGCRNTTGPLFRV
        KPTEFAETEVRDTLRSGCRNTTGPLFRV
Subjt:  KPTEFAETEVRDTLRSGCRNTTGPLFRV

KAG7010708.1 hypothetical protein SDJN02_27504, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-12099.56Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
        VGGIY KNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
Subjt:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK

Query:  KPTEFAETEVRDTLRSGCRNTTGPLFRV
        KPTEFAETEVRDTLRSGCRNTTGPLFRV
Subjt:  KPTEFAETEVRDTLRSGCRNTTGPLFRV

XP_008448227.1 PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo]1.3e-5059.73Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTV  TKP TTLAA+LDLED +T+      SCP+CRCSRN     SAIS PPK  LSRTAR IVFGTILIKRVRER+++ Q K D RKRS  LDS   P
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  V-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILIT
        V            GIYQ+NR+  L     SGS QSF ISIS+PKIS KK   G+  IG +Q        SCYAFNS + LL+VS GVTVMQGRV+ ILIT
Subjt:  V-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILIT

Query:  SIWVYFFAWMHMEDRWLRKKPTEFAE
        SI VYFFAWM MED WL+ K T+F E
Subjt:  SIWVYFFAWMHMEDRWLRKKPTEFAE

XP_022944613.1 uncharacterized protein LOC111449019 [Cucurbita moschata]5.5e-121100Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
        VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
Subjt:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK

Query:  KPTEFAETEVRDTLRSGCRNTTGPLFRV
        KPTEFAETEVRDTLRSGCRNTTGPLFRV
Subjt:  KPTEFAETEVRDTLRSGCRNTTGPLFRV

XP_022986371.1 uncharacterized protein LOC111484130 [Cucurbita maxima]1.9e-11393.86Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTVLETKPTTTLAAYLDLEDDETRIS+IDPSCPSCRCSRNSGRDCSAISRPPKRNLSR AR IVFGTILIK+VRERRSNHQQKSDRRKRSSSLDSGSSP
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
        VGGIYQKNRDNQLVGVEPSGSSQSFPISISKP+ISEKKA+GS TIG RQGSCYAFNSG+GLLLVS G TVMQGRVI ILITSIWVYFFAWMHMEDRWLRK
Subjt:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK

Query:  KPTEFAETEVRDTLRSGCRNTTGPLFRV
        KPTEFAETEVR TLRSGCRNT GPLFRV
Subjt:  KPTEFAETEVRDTLRSGCRNTTGPLFRV

TrEMBL top hitse value%identityAlignment
A0A1S3BK26 uncharacterized protein LOC1034904826.5e-5159.73Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTV  TKP TTLAA+LDLED +T+      SCP+CRCSRN     SAIS PPK  LSRTAR IVFGTILIKRVRER+++ Q K D RKRS  LDS   P
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  V-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILIT
        V            GIYQ+NR+  L     SGS QSF ISIS+PKIS KK   G+  IG +Q        SCYAFNS + LL+VS GVTVMQGRV+ ILIT
Subjt:  V-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILIT

Query:  SIWVYFFAWMHMEDRWLRKKPTEFAE
        SI VYFFAWM MED WL+ K T+F E
Subjt:  SIWVYFFAWMHMEDRWLRKKPTEFAE

A0A5A7TYI9 Uncharacterized protein3.2e-5059.91Show/hide
Query:  MGTVLETKP-TTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSS
        MGTV  TKP TTTLAA+LDLED +T+      SCP+CRCSRN     SAIS PPK  LSRTAR IVFGTILIKRVRER+++ Q K D RKRS  LDS   
Subjt:  MGTVLETKP-TTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSS

Query:  PV-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILI
        PV            GIYQ+NR+  L     SGS QSF ISIS+PKIS KK   G+  IG +Q        SCYAFNS + LL+VS GVTVMQGRV+ ILI
Subjt:  PV-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILI

Query:  TSIWVYFFAWMHMEDRWLRKKPTEFAE
        TSI VYFFAWM MED WL+ K T+F E
Subjt:  TSIWVYFFAWMHMEDRWLRKKPTEFAE

A0A5D3B9T8 Uncharacterized protein6.5e-5159.73Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTV  TKP TTLAA+LDLED +T+      SCP+CRCSRN     SAIS PPK  LSRTAR IVFGTILIKRVRER+++ Q K D RKRS  LDS   P
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  V-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILIT
        V            GIYQ+NR+  L     SGS QSF ISIS+PKIS KK   G+  IG +Q        SCYAFNS + LL+VS GVTVMQGRV+ ILIT
Subjt:  V-----------GGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKAS-GSGTIGARQ-------GSCYAFNSGIGLLLVSFGVTVMQGRVIAILIT

Query:  SIWVYFFAWMHMEDRWLRKKPTEFAE
        SI VYFFAWM MED WL+ K T+F E
Subjt:  SIWVYFFAWMHMEDRWLRKKPTEFAE

A0A6J1FY81 uncharacterized protein LOC1114490192.7e-121100Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
        VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
Subjt:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK

Query:  KPTEFAETEVRDTLRSGCRNTTGPLFRV
        KPTEFAETEVRDTLRSGCRNTTGPLFRV
Subjt:  KPTEFAETEVRDTLRSGCRNTTGPLFRV

A0A6J1JAX0 uncharacterized protein LOC1114841309.2e-11493.86Show/hide
Query:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP
        MGTVLETKPTTTLAAYLDLEDDETRIS+IDPSCPSCRCSRNSGRDCSAISRPPKRNLSR AR IVFGTILIK+VRERRSNHQQKSDRRKRSSSLDSGSSP
Subjt:  MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSP

Query:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK
        VGGIYQKNRDNQLVGVEPSGSSQSFPISISKP+ISEKKA+GS TIG RQGSCYAFNSG+GLLLVS G TVMQGRVI ILITSIWVYFFAWMHMEDRWLRK
Subjt:  VGGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRK

Query:  KPTEFAETEVRDTLRSGCRNTTGPLFRV
        KPTEFAETEVR TLRSGCRNT GPLFRV
Subjt:  KPTEFAETEVRDTLRSGCRNTTGPLFRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACCGTCCTCGAGACAAAACCCACCACCACTTTGGCGGCCTATCTTGACCTTGAAGATGACGAAACAAGAATTTCTAAAATCGACCCATCCTGCCCCAGTTGTCG
ATGCTCCAGAAATTCCGGCCGAGACTGCTCCGCCATTTCTCGCCCACCAAAGCGAAATCTTTCTCGGACGGCCAGAGTCATCGTGTTTGGTACCATTCTGATCAAAAGAG
TTCGTGAGAGAAGAAGCAACCACCAACAGAAATCTGACCGCCGGAAACGAAGTTCATCCCTGGATTCTGGAAGTTCTCCGGTAGGCGGAATTTACCAAAAAAACAGAGAC
AACCAACTAGTGGGAGTGGAGCCATCTGGGTCATCTCAGTCTTTTCCAATTTCAATATCTAAACCCAAAATTTCGGAAAAGAAAGCCAGTGGGAGTGGAACCATTGGTGC
GAGGCAGGGGAGTTGCTATGCATTTAATTCCGGCATTGGTTTGCTATTAGTGAGTTTCGGAGTGACAGTGATGCAGGGGAGAGTGATTGCCATCTTAATCACATCAATTT
GGGTATACTTTTTTGCTTGGATGCACATGGAGGATCGCTGGCTGAGGAAGAAACCGACAGAATTTGCAGAAACAGAGGTGAGGGACACTCTGAGGAGTGGCTGTCGGAAC
ACAACCGGACCTCTGTTTCGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACCGTCCTCGAGACAAAACCCACCACCACTTTGGCGGCCTATCTTGACCTTGAAGATGACGAAACAAGAATTTCTAAAATCGACCCATCCTGCCCCAGTTGTCG
ATGCTCCAGAAATTCCGGCCGAGACTGCTCCGCCATTTCTCGCCCACCAAAGCGAAATCTTTCTCGGACGGCCAGAGTCATCGTGTTTGGTACCATTCTGATCAAAAGAG
TTCGTGAGAGAAGAAGCAACCACCAACAGAAATCTGACCGCCGGAAACGAAGTTCATCCCTGGATTCTGGAAGTTCTCCGGTAGGCGGAATTTACCAAAAAAACAGAGAC
AACCAACTAGTGGGAGTGGAGCCATCTGGGTCATCTCAGTCTTTTCCAATTTCAATATCTAAACCCAAAATTTCGGAAAAGAAAGCCAGTGGGAGTGGAACCATTGGTGC
GAGGCAGGGGAGTTGCTATGCATTTAATTCCGGCATTGGTTTGCTATTAGTGAGTTTCGGAGTGACAGTGATGCAGGGGAGAGTGATTGCCATCTTAATCACATCAATTT
GGGTATACTTTTTTGCTTGGATGCACATGGAGGATCGCTGGCTGAGGAAGAAACCGACAGAATTTGCAGAAACAGAGGTGAGGGACACTCTGAGGAGTGGCTGTCGGAAC
ACAACCGGACCTCTGTTTCGTGTTTAA
Protein sequenceShow/hide protein sequence
MGTVLETKPTTTLAAYLDLEDDETRISKIDPSCPSCRCSRNSGRDCSAISRPPKRNLSRTARVIVFGTILIKRVRERRSNHQQKSDRRKRSSSLDSGSSPVGGIYQKNRD
NQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGIGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRKKPTEFAETEVRDTLRSGCRN
TTGPLFRV