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CmoCh20G006610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G006610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCmo_Chr20:3232462..3233457
RNA-Seq ExpressionCmoCh20G006610
SyntenyCmoCh20G006610
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010763.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-3898.91Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
XP_022943541.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]6.2e-39100Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
XP_022943542.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]3.1e-38100Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
XP_022943543.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita moschata]6.2e-3998.91Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
XP_023512420.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]3.4e-3797.8Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHR FRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
TrEMBL top hitse value%identityAlignment
A0A6J1FS03 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.0e-39100Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
A0A6J1FTB0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.5e-38100Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
A0A6J1FX39 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X33.0e-3998.91Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
A0A6J1J7G1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X12.1e-3797.8Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
A0A6J1JFZ5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X32.1e-3796.74Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.0e-0744.32Show/hide
Query:  GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
        GARS+ R  + S+R AAA  G  A  + S P  FR    +       R   E+SFC+ES++P+HSA++SALMTS LS+S    GWL +
Subjt:  GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPE
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.2e-1147.19Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
AT1G28395.2 unknown protein1.2e-1147.19Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
AT1G28395.3 unknown protein1.2e-1147.19Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEG
AT1G28395.4 unknown protein7.6e-1147.67Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWL
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWL
AT1G28395.5 unknown protein7.6e-1147.67Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWL
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTCGTCATCAAGTACTCCTTTTCG
CATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCATCTTCAGCTTTGA
TGACCTCAATGCTCTCTGTCTCGCGCAGCTGCTGCGGTTGGCTTCCCGAAGGTGCGTAA
mRNA sequenceShow/hide mRNA sequence
AGAAACCCTTCACACTCAAAGTAGGGTTTTAGCTTTAACCCTCTGCAGCCAAGAAGCCAGAGTCGAGTTCTTGTTGTTGATAGTCTGTACTAAGAACGGACTTTCAGAAT
CTATCATTTCTTCAGATTAACAATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGT
CGTCATCAAGTACTCCTTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCAC
TCTGCGTCATCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCTGCTGCGGTTGGCTTCCCGAAGGTGCGTAACTGATAATTGAACTCTGAAGTTTCTTGAT
CTGTCACGAGCTAGATCGAAAGAGGCAAGGACGCTAATATAAATTTGTATAGCTTGGAATTTAGATCATATCTACGATTTTAGCATGATTTCTTCCGTGGACAAGAAAGA
AAGCTGATAATTTGCCGGAAGTTGATTTTCTATTTGCATTGGTTCTTCGTTGGATGAATCTCAGATTTATAATTATTTGCATGAATCAAGAAAGAGAGCAGTAGCTTGGG
CGAGAATAATGGTCAACTATATTTATAAATAGTGATATCTATATTAAGGTTTAGGGGTCATAATCTGATGTTTCTTGA
Protein sequenceShow/hide protein sequence
MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSCCGWLPEGA