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CmoCh20G007720 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007720
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:3870143..3870430
RNA-Seq ExpressionCmoCh20G007720
SyntenyCmoCh20G007720
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045689.1 hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa]3.0e-4490.62Show/hide
Query:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPRPSGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCLS++DSS RYYACPCNRGWKM CRCG G AW
Subjt:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW

KAG6571042.1 hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]3.1e-49100Show/hide
Query:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRGAW
        MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRGAW
Subjt:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRGAW

KAG6605007.1 hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3682.11Show/hide
Query:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRGAW
        MTYCYG KP PSGPLPGP+L+LL VVFILIGLSSLF SEPIDFSEFQINWPLLAVPII+LVLVR LS+VDSSSR+  C C+RGWKM CRC  GAW
Subjt:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRGAW

KGN61893.1 hypothetical protein Csa_006600 [Cucumis sativus]6.6e-4489.58Show/hide
Query:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPRPSGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCL+++DSS RYYACPC+RGWKM CRCGRG AW
Subjt:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW

PKI78722.1 hypothetical protein CRG98_000947 [Punica granatum]9.6e-1146.74Show/hide
Query:  YCYGCK-PRPS-GPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYA-CPCNRGWKMQCRC
        YCY CK P PS GP+P  VLL L +  I I LS L   + + +  E  INW LLAVPI++L +V  LS++D   ++Y   PC R WK  C C
Subjt:  YCYGCK-PRPS-GPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYA-CPCNRGWKMQCRC

TrEMBL top hitse value%identityAlignment
A0A0A0LJB6 Uncharacterized protein3.2e-4489.58Show/hide
Query:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPRPSGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCL+++DSS RYYACPC+RGWKM CRCGRG AW
Subjt:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW

A0A1R3JDI7 Uncharacterized protein8.2e-0843.02Show/hide
Query:  YCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNR--GWK
        YC  C  RPS P+P  VLL LA+  +L+ LSSL   E  ++ +E  + W +L   + LLV+VRCLS+ DS  + + C C R   WK
Subjt:  YCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNR--GWK

A0A2I0LDH6 Uncharacterized protein4.6e-1146.74Show/hide
Query:  YCYGCK-PRPS-GPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYA-CPCNRGWKMQCRC
        YCY CK P PS GP+P  VLL L +  I I LS L   + + +  E  INW LLAVPI++L +V  LS++D   ++Y   PC R WK  C C
Subjt:  YCYGCK-PRPS-GPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYA-CPCNRGWKMQCRC

A0A5D3BJW1 Uncharacterized protein1.4e-4490.62Show/hide
Query:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPRPSGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCLS++DSS RYYACPCNRGWKM CRCG G AW
Subjt:  MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRG-AW

A0A6J1C2N0 uncharacterized protein LOC1110078951.4e-0758.33Show/hide
Query:  PLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIILLVLVRCLSTVDSS
        PLP PVLLLL VVF+ +G S  F  E  ++ +E QINW L A P++L+VLVRCLS+VD S
Subjt:  PLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIILLVLVRCLSTVDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein2.2e-0548.33Show/hide
Query:  PLPGPVLLLLAVVFILIGLSSLFPS--EPIDFSEFQINWPLLAVPIILLVLVRCLSTVDS
        PLP PVLL+LAV  + + LSS + S  E  + +E QIN+ LL +P+ L+VLVR LS++++
Subjt:  PLPGPVLLLLAVVFILIGLSSLFPS--EPIDFSEFQINWPLLAVPIILLVLVRCLSTVDS

AT2G21185.1 unknown protein4.8e-0839.77Show/hide
Query:  CYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLL-AVPIILLVLVRCLSTVDSSSR-YYACPCNRGWKMQC
        C  C+   S   P PV++++ V  +L+ LSS+   E  +   E  ++W LL AVP+ LL  VRCLS +++S R  Y CPC R W+  C
Subjt:  CYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLL-AVPIILLVLVRCLSTVDSSSR-YYACPCNRGWKMQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTATTGCTATGGCTGTAAACCTCGCCCTTCCGGTCCACTCCCCGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCC
CTCCGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTTGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGACCGTGGATTCTTCATCCA
GGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCGTGGCGCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTATTGCTATGGCTGTAAACCTCGCCCTTCCGGTCCACTCCCCGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCC
CTCCGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTTGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGACCGTGGATTCTTCATCCA
GGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCGTGGCGCGTGGTAA
Protein sequenceShow/hide protein sequence
MTYCYGCKPRPSGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSTVDSSSRYYACPCNRGWKMQCRCGRGAW