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CmoCh20G007790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3907821..3908114
RNA-Seq ExpressionCmoCh20G007790
SyntenyCmoCh20G007790
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.0e-47100Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

KAG6571057.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]5.5e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLL+AKQ+VKMQTVS RNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.0e-47100Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]2.5e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQ+VKMQTV SRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_023512604.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]1.9e-4697.94Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHP GGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein1.1e-4492.78Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like3.3e-4491.75Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLL NAKQ+ KM TVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like4.9e-48100Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1FVI6 auxin-responsive protein SAUR21-like3.5e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCRE+VFINLTS LQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1JGW3 auxin-responsive protein SAUR21-like1.2e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MGIRLPSLLLNAKQ+VKMQTV SRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.6e-2459.77Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T +       PKG +AVYVG++++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.2e-2460.92Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T S+      PKG +AVYVG++++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR209.5e-2560.92Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T ++      PKG +AVYVG++++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.8e-2459.77Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T +       PKG +AVYVG++++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.2e-2460.92Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T +       PKG +AVYVG++++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.7e-2757.14Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD-TERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+  +++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI+L SRL TS
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD-TERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

AT4G34810.1 SAUR-like auxin-responsive protein family3.0e-2656.19Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCG------VPKGHIAVYVG---DTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQI+K+ ++++RN+        VPKGH+AVYVG   + E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCG------VPKGHIAVYVG---DTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.0e-2656.7Show/hide
Query:  MGIRLPSLLLNAKQIVK----MQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSR
        M IR+P +L ++KQI++    + + SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQIVK----MQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family6.7e-2660.92Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T ++      PKG +AVYVG++++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family8.8e-2660.92Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+I+   T +       PKG +AVYVG++++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAATTGTCAAAATGCAAACTGTTTCTTCTAGAAATCAATGTGGCGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATACCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGACTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGGGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCACATCCAGGCTGCAAACTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAATTGTCAAAATGCAAACTGTTTCTTCTAGAAATCAATGTGGCGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATACCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGACTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGGGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCACATCCAGGCTGCAAACTTCCTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS