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CmoCh20G007850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3914783..3915076
RNA-Seq ExpressionCmoCh20G007850
SyntenyCmoCh20G007850
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649278.1 auxin-responsive protein SAUR21 [Cucumis sativus]7.4e-4390.72Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQ+LKMQA+SARNQ +VPKGHIAVYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHPMGGLTIPCREDAF+NL ARL  S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

XP_022944374.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.1e-4393.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQAISARNQ NVPKGHI VYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHP+GGL IPCREDAFLNLAARL RS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

XP_022944376.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.0e-48100Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

XP_023533288.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]7.4e-4392.55Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL
        MG RLPSILLNAKQILKMQA+SARNQF+VPKGHIAVYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHPMGGLTIPCREDAF+NL +RL
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL

XP_031736840.1 auxin-responsive protein SAUR21 [Cucumis sativus]3.3e-4391.75Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQA+SARNQF+VPKGHIAVYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHP GGLTIPCREDAF+NL ARL  S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

TrEMBL top hitse value%identityAlignment
A0A0A0LM74 Uncharacterized protein2.1e-4391.75Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQA+SARNQF+VPKGHIAVYVGEIQRKRFVVPISYLK+P FVDLLNRSEEEFGFCHPMGGLTIPCREDAF+NL ARL  S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

A0A5A7TQ57 Auxin-responsive protein SAUR21-like3.0e-4289.69Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQA+SARNQ +VPKGHIAVYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHP GGLTIPCREDAF+NL A+L  S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

A0A6J1FU92 auxin-responsive protein SAUR21-like9.8e-49100Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

A0A6J1FWK8 auxin-responsive protein SAUR21-like5.6e-4493.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSILLNAKQILKMQAISARNQ NVPKGHI VYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHP+GGL IPCREDAFLNLAARL RS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

A0A6J1JC36 auxin-responsive protein SAUR21-like6.1e-4391.75Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        MGIRLPSIL NAKQILKMQAISARNQ +VPKGHIAVYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHPMGGLTIPCREDAF+NL  RL RS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR237.5e-2259.3Show/hide
Query:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL
        LL AK+IL   A +       PKG +AVYVGE Q+KR++VP+SYL  P F  LL++SEEEFGF HPMGGLTIPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL

Q9FJF7 Auxin-responsive protein SAUR224.4e-2259.09Show/hide
Query:  LLNAKQILKMQ--AISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL
        LL AK+IL     A+SA      PKG +AVYVGE Q+KR++VP+SYL  P F  LL++SE+EFGF HPMGGLTIPC ED F+N+ +RL
Subjt:  LLNAKQILKMQ--AISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL

Q9FJF9 Auxin-responsive protein SAUR218.9e-2360.47Show/hide
Query:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL
        LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  P F  LL++SEEEFGF HPMGGLTIPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL

Q9FJG0 Auxin-responsive protein SAUR201.2e-2259.09Show/hide
Query:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPR
        LL AK+IL     +A      PKG +AVYVGE Q+KR++VPISYL  P F  LL++SEEEFGF HPMGGLTIPC ED F+N+ +R  R
Subjt:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPR

Q9FJG1 Auxin-responsive protein SAUR193.4e-2258.14Show/hide
Query:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL
        LL AK+IL     +       PKG +AVYVGE Q+KR++VP+SYL  P F  LL++SEEEFGF HPMGGLTIPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family7.2e-2858.16Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGE-IQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS
        M IR+  +L ++KQ+LK  + S+ N   +PKGH+AVYVGE +Q++RFVVP++YL HPCF  LL ++EEEFGF HPMGGLTIPC E  F++LA+RL  S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGE-IQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS

AT4G34790.1 SAUR-like auxin-responsive protein family3.7e-2456.86Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQFN-----------VPKGHIAVYVGE-IQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFL
        MG+ + S+L NAKQI K Q++  +N  +           VPKGH+AVYVGE +++KRFVVPISYL HP F + LNR+EEE GF H MGGLTIPCRE++FL
Subjt:  MGIRLPSILLNAKQILKMQAISARNQFN-----------VPKGHIAVYVGE-IQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFL

Query:  NL
         L
Subjt:  NL

AT4G34810.1 SAUR-like auxin-responsive protein family8.8e-2656.44Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQF------NVPKGHIAVYVG---EIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLA
        MG+   +I    KQILK+ +++ RN+       +VPKGH+AVYVG   E+++KRFVVPIS+L HP F + L+R+EEEFGF HPMGGLTIPCRE+ FL+L 
Subjt:  MGIRLPSILLNAKQILKMQAISARNQF------NVPKGHIAVYVG---EIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLA

Query:  A
        A
Subjt:  A

AT4G38840.1 SAUR-like auxin-responsive protein family6.1e-2756.7Show/hide
Query:  MGIRLPSILLNAKQILK----MQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAAR
        M IR+P +L ++KQIL+    + + S+ +  +VPKG++AVYVGE   KRFVVP+SYL  P F DLL ++EEEFGF HPMGGLTIPC E+ F++LA+R
Subjt:  MGIRLPSILLNAKQILK----MQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAAR

AT5G18030.1 SAUR-like auxin-responsive protein family6.3e-2460.47Show/hide
Query:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL
        LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  P F  LL++SEEEFGF HPMGGLTIPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATTCAATGTTCCCAAAGGCCACATTGCAGTCTA
CGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCCTGTTTTGTAGATCTTCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATC
CAATGGGCGGCTTGACGATTCCATGCAGAGAAGATGCTTTCTTAAATCTCGCTGCTAGGCTGCCCAGATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATTCAATGTTCCCAAAGGCCACATTGCAGTCTA
CGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCCTGTTTTGTAGATCTTCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATC
CAATGGGCGGCTTGACGATTCCATGCAGAGAAGATGCTTTCTTAAATCTCGCTGCTAGGCTGCCCAGATCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSILLNAKQILKMQAISARNQFNVPKGHIAVYVGEIQRKRFVVPISYLKHPCFVDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLAARLPRS