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CmoCh20G007860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3916788..3918746
RNA-Seq ExpressionCmoCh20G007860
SyntenyCmoCh20G007860
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]5.7e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSF ALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

XP_022146165.1 auxin-responsive protein SAUR21-like [Momordica charantia]1.2e-0780.56Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSFVALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

XP_022146176.1 auxin-responsive protein SAUR21-like [Momordica charantia]5.7e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSF ALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

XP_023007087.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]2.6e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSFVALLK+A++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

XP_023533283.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.4e-0782.35Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTG
        RKRFVVP SYL+HPSFVALLK+A++EFGF+HPTG
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTG

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein2.8e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSF ALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

A0A5D3BMR1 Auxin-responsive protein SAUR21-like2.8e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSF ALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

A0A6J1CWI4 auxin-responsive protein SAUR21-like5.6e-0880.56Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSFVALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

A0A6J1CYI4 auxin-responsive protein SAUR21-like2.8e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSF ALLKSA++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

A0A6J1KXM0 auxin-responsive protein SAUR21-like1.2e-0777.78Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        RKRFVVP SYL+HPSFVALLK+A++EFGF+HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.5e-0555.56Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KR++VP SYL+ PSF ALL  +++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

Q9FJF9 Auxin-responsive protein SAUR211.1e-0558.33Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KR++VP SYLS PSF ALL  +++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

Q9FJG0 Auxin-responsive protein SAUR202.5e-0555.56Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KR++VP SYL+ PSF ALL  +++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

Q9FJG1 Auxin-responsive protein SAUR198.6e-0658.33Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KR++VP SYLS PSF ALL  +++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

Q9FK62 Auxin-responsive protein SAUR241.9e-0555.56Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KR++VP SYL+ PSF ALL  +++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.7e-0758.33Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        ++RFVVP +YLSHP F  LL+ A++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

AT4G13790.1 SAUR-like auxin-responsive protein family2.1e-0758.33Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KR++VP  YL+ PSF ALL+ A++EFGF HPTG +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

AT4G34770.1 SAUR-like auxin-responsive protein family1.2e-0748.98Show/hide
Query:  SFVRKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDIDNLEVNDHFS
        ++ RKRFV+P SYL+HP F  LL  A++EFGF HP G +      D+F+
Subjt:  SFVRKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDIDNLEVNDHFS

AT4G34800.1 SAUR-like auxin-responsive protein family4.2e-0863.89Show/hide
Query:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        +KRFVVP SYL+HPSF  LL  A++EFGF HP G +
Subjt:  RKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI

AT4G34810.1 SAUR-like auxin-responsive protein family4.7e-0755Show/hide
Query:  ISFVRKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI
        I   +KRFVVP S+L+HPSF   L  A++EFGF HP G +
Subjt:  ISFVRKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATATTTCCTTTGTAAGGAAGCGGTTTGTAGTTCCAACATCATACTTGAGCCACCCTTCTTTTGTAGCTCTGCTCAAGAGCGCTCAACAAGAATTTGGATTTAG
ACATCCAACAGGAGACATTGATAATCTTGAAGTGAATGATCATTTTTCAATCTCAATGGCATTCATTCAAATTCTGGAAGAGTTTCTGAAGGAAGTGCTGTCTATGCTGG
TGAGTGTGGCCTTTCCAGTGGCTCTGTGGGGTAGTGATGTCTGGTGGTTGGGTATATTTGAGTATACTGGTTCACATGGCTTTGCCCAACTCATGAAAGGGCCATCCATT
TTCTTCTCCCACTCGATAGTCTCTGTATTCTATACCACAAATTTCAGTGGGACTGTCACCCGTAGTCAGGGCACATATGGAAGTGCCTGTATACAAACCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATATTTCCTTTGTAAGGAAGCGGTTTGTAGTTCCAACATCATACTTGAGCCACCCTTCTTTTGTAGCTCTGCTCAAGAGCGCTCAACAAGAATTTGGATTTAG
ACATCCAACAGGAGACATTGATAATCTTGAAGTGAATGATCATTTTTCAATCTCAATGGCATTCATTCAAATTCTGGAAGAGTTTCTGAAGGAAGTGCTGTCTATGCTGG
TGAGTGTGGCCTTTCCAGTGGCTCTGTGGGGTAGTGATGTCTGGTGGTTGGGTATATTTGAGTATACTGGTTCACATGGCTTTGCCCAACTCATGAAAGGGCCATCCATT
TTCTTCTCCCACTCGATAGTCTCTGTATTCTATACCACAAATTTCAGTGGGACTGTCACCCGTAGTCAGGGCACATATGGAAGTGCCTGTATACAAACCAAGTAA
Protein sequenceShow/hide protein sequence
MFYISFVRKRFVVPTSYLSHPSFVALLKSAQQEFGFRHPTGDIDNLEVNDHFSISMAFIQILEEFLKEVLSMLVSVAFPVALWGSDVWWLGIFEYTGSHGFAQLMKGPSI
FFSHSIVSVFYTTNFSGTVTRSQGTYGSACIQTK