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CmoCh20G007880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3918934..3921205
RNA-Seq ExpressionCmoCh20G007880
SyntenyCmoCh20G007880
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]7.5e-4097.67Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]7.5e-4097.67Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

XP_022944372.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]8.8e-41100Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]9.8e-4096.51Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQ+VKMQTV SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

XP_023512604.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]6.3e-3996.51Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHP GGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein8.9e-3993.02Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

A0A5D3BMR1 Auxin-responsive protein SAUR21-like2.6e-3891.86Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLL NAKQ+ KM TVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

A0A6J1FVH4 auxin-responsive protein SAUR21-like3.6e-4097.67Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

A0A6J1FVI6 auxin-responsive protein SAUR21-like4.3e-41100Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

A0A6J1JGW3 auxin-responsive protein SAUR21-like4.7e-4096.51Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MGIRLPSLLLNAKQ+VKMQTV SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCRE+V
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR222.2e-1855.84Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE
        LL AK+I+   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC E+
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE

Q9FJF9 Auxin-responsive protein SAUR211.7e-1857.14Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE
        LL AK+I+   T S+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC E+
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE

Q9FJG0 Auxin-responsive protein SAUR201.5e-1953.41Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV---LAARFKK
        LL AK+I+   T ++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC E+    + +RF++
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV---LAARFKK

Q9FJG1 Auxin-responsive protein SAUR193.8e-1855.84Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE
        LL AK+I+   T +       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC E+
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE

Q9FK62 Auxin-responsive protein SAUR241.7e-1857.14Show/hide
Query:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE
        LL AK+I+   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC E+
Subjt:  LLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.8e-2352.53Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV---LAARFKKAS
        M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E++   LA+R   +S
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV---LAARFKKAS

AT4G34790.1 SAUR-like auxin-responsive protein family9.8e-2256.7Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCG-----------VPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE
        MG+ + S+L NAKQI K Q++ ++N              VPKGH+AVYVG+ +E+KRFVVPISYLNHP F   L  AEEE GF H  GGLTIPCREE
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCG-----------VPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE

AT4G34800.1 SAUR-like auxin-responsive protein family4.0e-2364.37Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE
        M IRL S ++N+KQ       S + Q  VPKGH+AVYVG+    +KRFVVPISYLNHPSF  LL  AEEEFGF HP GGLTIPCREE
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREE

AT4G34810.1 SAUR-like auxin-responsive protein family6.1e-2456.84Show/hide
Query:  MGIRLPSLLLNAKQIVKMQTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV
        MG+   ++    KQI+K+ ++++RN+        VPKGH+AVYVG   ++E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCREEV
Subjt:  MGIRLPSLLLNAKQIVKMQTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV

AT4G38840.1 SAUR-like auxin-responsive protein family2.1e-2456.12Show/hide
Query:  MGIRLPSLLLNAKQIVK----MQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV---LAARF
        M IR+P +L ++KQI++    + + SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC EE+   LA+RF
Subjt:  MGIRLPSLLLNAKQIVK----MQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEV---LAARF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAATTGTCAAAATGCAGACCGTTTCTTCTAGAAATCAATGTGGCGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGACTGCTGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGATTGACAATTCCTTGCAGAGAAGAGGTCCTAGCAGCAAGATTTAAGAAAGCATCTTCTCTGCATGGAATCATCAAGCCGCCCACTGGATGGCAAAATCCA
AATTCTTCTTCTGATCTATTAAGAAGATCTACAAAAGAAGGATGCTTCAAGTATGATATAGATATAGCTTGCATTTTCAGAATCTGCTTGGCATTAAGAAGAATCGATGG
CAAACGGATTCCCATATCGGATATTTCCTCGAAACAAGAGAAAGGAACTGGAGAGGAGAACAAAAAGAGTATACTTCGAGGGCCTACTTCTCCAAAGGCTCACATGGTGG
CTGAGAGTACATTGGTGGTGATAGGAGCTGTGAGTCAAATGAAATCTGAGCTACTTCCCTCACCTACAAGCTGGGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAATTGTCAAAATGCAGACCGTTTCTTCTAGAAATCAATGTGGCGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGACTGCTGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGATTGACAATTCCTTGCAGAGAAGAGGTCCTAGCAGCAAGATTTAAGAAAGCATCTTCTCTGCATGGAATCATCAAGCCGCCCACTGGATGGCAAAATCCA
AATTCTTCTTCTGATCTATTAAGAAGATCTACAAAAGAAGGATGCTTCAAGTATGATATAGATATAGCTTGCATTTTCAGAATCTGCTTGGCATTAAGAAGAATCGATGG
CAAACGGATTCCCATATCGGATATTTCCTCGAAACAAGAGAAAGGAACTGGAGAGGAGAACAAAAAGAGTATACTTCGAGGGCCTACTTCTCCAAAGGCTCACATGGTGG
CTGAGAGTACATTGGTGGTGATAGGAGCTGTGAGTCAAATGAAATCTGAGCTACTTCCCTCACCTACAAGCTGGGTTCATTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCREEVLAARFKKASSLHGIIKPPTGWQNP
NSSSDLLRRSTKEGCFKYDIDIACIFRICLALRRIDGKRIPISDISSKQEKGTGEENKKSILRGPTSPKAHMVAESTLVVIGAVSQMKSELLPSPTSWVH