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CmoCh20G007890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3923293..3923586
RNA-Seq ExpressionCmoCh20G007890
SyntenyCmoCh20G007890
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649278.1 auxin-responsive protein SAUR21 [Cucumis sativus]2.6e-4390.72Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQ+LKMQA+SARNQS+VPKGHI VYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP+GGL IPCREDAF+NL ARLH S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

XP_022944374.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.9e-47100Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

XP_022944376.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.6e-4393.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQILKMQAISARNQ NVPKGHI VYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHP+GGL IPCREDAFLNLAARL RS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

XP_022986736.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]4.4e-4391.75Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSIL NAKQILKMQAISARNQS+VPKGHI VYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP+GGL IPCREDAF+NL  RLHRS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

XP_038901157.1 auxin-responsive protein SAUR21-like [Benincasa hispida]5.7e-4389.69Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQ+LKMQA+SARNQS+VPKGHI VYVGEIQRKRFVVPISYLKHPSFVDLLN+SEEEFGFCHP+GGL IPCREDAF+NL ARLH S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

TrEMBL top hitse value%identityAlignment
A0A1S4E2E4 auxin-responsive protein SAUR21-like2.8e-4390.72Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQILKMQA+SARNQS+VPKGHI VYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGL IPCREDAF+NL A+LH S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

A0A5A7TQ57 Auxin-responsive protein SAUR21-like2.8e-4390.72Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQILKMQA+SARNQS+VPKGHI VYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGL IPCREDAF+NL A+LH S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

A0A6J1FU92 auxin-responsive protein SAUR21-like1.2e-4393.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQILKMQAISARNQ NVPKGHI VYVGEIQRKRFVVPISYLKHP FVDLLNRSEEEFGFCHP+GGL IPCREDAFLNLAARL RS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

A0A6J1FWK8 auxin-responsive protein SAUR21-like1.4e-47100Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

A0A6J1JC36 auxin-responsive protein SAUR21-like2.1e-4391.75Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        MGIRLPSIL NAKQILKMQAISARNQS+VPKGHI VYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP+GGL IPCREDAF+NL  RLHRS
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR235.8e-2258.62Show/hide
Query:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLH
        LL AK+IL   A +    S  PKG + VYVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HP+GGL IPC ED F+N+ +RLH
Subjt:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLH

Q9FJF7 Auxin-responsive protein SAUR224.9e-2155.81Show/hide
Query:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARL
        LL AK+IL     +    S  PKG + VYVGE Q+KR++VP+SYL  PSF  LL++SE+EFGF HP+GGL IPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARL

Q9FJF9 Auxin-responsive protein SAUR212.2e-2158.14Show/hide
Query:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARL
        LL AK+IL     SA      PKG + VYVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HP+GGL IPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARL

Q9FJG0 Auxin-responsive protein SAUR205.8e-2257.95Show/hide
Query:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHR
        LL AK+IL     +A   S  PKG + VYVGE Q+KR++VPISYL  PSF  LL++SEEEFGF HP+GGL IPC ED F+N+ +R  R
Subjt:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHR

Q9FJG1 Auxin-responsive protein SAUR191.7e-2156.98Show/hide
Query:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARL
        LL AK+IL     +    S  PKG + VYVGE Q+KR++VP+SYL  PSF  LL++SEEEFGF HP+GGL IPC ED F+N+ +RL
Subjt:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.7e-2554.08Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGE-IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS
        M IR+  +L ++KQ+LK  + S+ N + +PKGH+ VYVGE +Q++RFVVP++YL HP F  LL ++EEEFGF HP+GGL IPC E  F++LA+RL  S
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGE-IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS

AT4G34800.1 SAUR-like auxin-responsive protein family1.1e-2360.87Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGE--IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNL
        M IRL S ++N+KQ       S + QS VPKGH+ VYVGE    +KRFVVPISYL HPSF  LL+R+EEEFGF HP+GGL IPCRE+ F+ L
Subjt:  MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGE--IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNL

AT4G34810.1 SAUR-like auxin-responsive protein family9.7e-2554.46Show/hide
Query:  MGIRLPSILLNAKQILKMQAISARNQS------NVPKGHIVVYVG---EIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLA
        MG+   +I    KQILK+ +++ RN++      +VPKGH+ VYVG   E+++KRFVVPIS+L HPSF + L+R+EEEFGF HP+GGL IPCRE+ FL+L 
Subjt:  MGIRLPSILLNAKQILKMQAISARNQS------NVPKGHIVVYVG---EIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLA

Query:  A
        A
Subjt:  A

AT4G38840.1 SAUR-like auxin-responsive protein family1.5e-2553.54Show/hide
Query:  MGIRLPSILLNAKQILK----MQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLH
        M IR+P +L ++KQIL+    + + S+ +  +VPKG++ VYVGE   KRFVVP+SYL  PSF DLL ++EEEFGF HP+GGL IPC E+ F++LA+R +
Subjt:  MGIRLPSILLNAKQILK----MQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLH

AT5G18020.1 SAUR-like auxin-responsive protein family4.1e-2357.95Show/hide
Query:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHR
        LL AK+IL     +A   S  PKG + VYVGE Q+KR++VPISYL  PSF  LL++SEEEFGF HP+GGL IPC ED F+N+ +R  R
Subjt:  LLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATCCAATGTTCCCAAAGGCCACATTGTAGTCTA
TGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTTCTTAATAGATCAGAAGAAGAATTTGGATTTTGCCATC
CAGTGGGCGGCTTGATGATTCCATGCAGAGAAGATGCTTTCTTAAATCTTGCTGCTAGGCTGCACAGATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATCCAATGTTCCCAAAGGCCACATTGTAGTCTA
TGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTTCTTAATAGATCAGAAGAAGAATTTGGATTTTGCCATC
CAGTGGGCGGCTTGATGATTCCATGCAGAGAAGATGCTTTCTTAAATCTTGCTGCTAGGCTGCACAGATCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSILLNAKQILKMQAISARNQSNVPKGHIVVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPVGGLMIPCREDAFLNLAARLHRS