; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G007910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr20:3925817..3926110
RNA-Seq ExpressionCmoCh20G007910
SyntenyCmoCh20G007910
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571056.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]7.9e-4594.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSFQQLLSHAEEKFGFHH  GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

XP_022944363.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.4e-49100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]9.4e-4695.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSFQQLLSHAEEKFGFHHP GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.1e-4594.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRF+VPI YLNHPSFQQLLSHAEEKFGFHHP GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]2.1e-4594.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSFQQLL+HAEEKFGFHHP GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1FU83 auxin-responsive protein SAUR24-like1.0e-4594.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRF+VPI YLNHPSFQQLLSHAEEKFGFHHP GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

A0A6J1FU85 auxin-responsive protein SAUR23-like6.6e-4593.81Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSFQQLLSHAEEKFGFHHP GGLTIPCKEDAFI LTSRL VS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like4.5e-4695.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSFQQLLSHAEEKFGFHHP GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

A0A6J1FXZ5 auxin-responsive protein SAUR24-like1.2e-49100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like4.5e-4695.88Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSFQQLLSHAEEKFGFHHP GGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B1.3e-2160.49Show/hide
Query:  QSGFTKNQ-----LDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRL
        ++ F+ NQ     +DV KG++AVYVGE + +RFV+P+ YLN PSFQ LLS AEE+FG+HHP+GGLTIPC ED F H+TS L
Subjt:  QSGFTKNQ-----LDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRL

Q9FJF7 Auxin-responsive protein SAUR222.2e-2169.7Show/hide
Query:  PKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ
        PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +E++FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR213.7e-2169.7Show/hide
Query:  PKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ
        PKG +AVYVGE Q+KR++VP+ YL+ PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR209.8e-2263.29Show/hide
Query:  KMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPI YLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ

Q9FK62 Auxin-responsive protein SAUR242.0e-2261.9Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.6e-2557.14Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-FQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS
        M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE  Q++RFVVP+ YL+HP FQ+LL  AEE+FGF HP GGLTIPC E  FI L SRL  S
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-FQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family4.8e-2453.92Show/hide
Query:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-FQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRL
        S++P+AKQI K QS   KN              VPKGHVAVYVGE  ++KRFVVPI YLNHP F++ L+ AEE+ GFHH  GGLTIPC+E++F++L +  
Subjt:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-FQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRL

Query:  QV
        Q+
Subjt:  QV

AT4G34810.1 SAUR-like auxin-responsive protein family9.7e-2555.24Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E ++KRFVVPI +LNHPSF++ LS AEE+FGF+HP GGLTIPC+E+ F+ L 
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.3e-2456.7Show/hide
Query:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSR
        M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+ YL+ PSFQ LL  AEE+FGF HP GGLTIPC E+ FI L SR
Subjt:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family1.4e-2361.9Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTCGCAGTTTA
TGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATTTTACCTAAACCATCCATCGTTCCAGCAATTGCTCAGCCACGCAGAGGAGAAGTTTGGGTTCCATCATC
CACATGGAGGCCTAACAATTCCTTGCAAAGAAGACGCCTTTATCCATCTCACTTCTAGACTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTCGCAGTTTA
TGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATTTTACCTAAACCATCCATCGTTCCAGCAATTGCTCAGCCACGCAGAGGAGAAGTTTGGGTTCCATCATC
CACATGGAGGCCTAACAATTCCTTGCAAAGAAGACGCCTTTATCCATCTCACTTCTAGACTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS