; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G007920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr20:3927206..3929932
RNA-Seq ExpressionCmoCh20G007920
SyntenyCmoCh20G007920
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571056.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4698.95Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHH QGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]5.6e-47100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.2e-4698.95Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_022944371.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]8.0e-4698.94Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
        MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.2e-4698.95Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL+HAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

TrEMBL top hitse value%identityAlignment
A0A6J1CYH2 auxin-responsive protein SAUR23-like7.3e-4593.81Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQNE
        MGIR LSLVPHAK ILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL  E
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQNE

A0A6J1FU83 auxin-responsive protein SAUR24-like6.0e-4798.95Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1FU85 auxin-responsive protein SAUR23-like3.9e-4698.94Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
        MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL

A0A6J1FVI4 auxin-responsive protein SAUR24-like2.7e-47100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1JHE3 auxin-responsive protein SAUR24-like2.7e-47100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR238.4e-2272.31Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRL
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR224.9e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E++FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR218.4e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.2e-2264.56Show/hide
Query:  KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.4e-2363.1Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.8e-2658.95Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
        M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LL  AEE+FGF HP GGLTIPC E  FIDL SRL
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL

AT4G34790.1 SAUR-like auxin-responsive protein family4.1e-2455.45Show/hide
Query:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
        S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L+ AEE+ GFHH  GGLTIPC+E++F+ L +  
Subjt:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL

Query:  Q
        Q
Subjt:  Q

AT4G34810.1 SAUR-like auxin-responsive protein family2.6e-2657.14Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEE+FGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family4.4e-2658.76Show/hide
Query:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSR
        M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEE+FGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family3.2e-2463.1Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCA
GTTTACGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCAGAGGAGAAGTTTGGC
TTCCATCATCCTCAAGGCGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCAAAATGAGGTCGTGTTAATGGAATTTGGACCC
TATTGTATGCAAAGGTTGTCTTTCTGTTCCATTTTGAACATGAAATTCACTAACAAAGAAACTCATTTACATTCCAAAAGGCTTAAGATTGTATTCGTGCACAAG
TTAGAAAGAAATCAATTCGGGAAAAAAATGAGTCAAAAATTGATTGATGCCTATTCCAGCATCTTCATCCTTCAAGAGTGTTGCAGTCTAGAAAGTTATGAAGAG
AGAAGTGGCCTAAGTATTTCCAGTGAGCTTAAAAGTGGCTCACTAGCATCGCCATTCTCATCCAACAAGTACTCTATTTCCTACATCAAATTCAAAATCAAGCAG
AACACCATTCAAAGTCAGTCACCCCTCTCTTGTTTTGAGGAAATTTTCGATATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATG
CAAGCTCTATCTGCAAGAAATCAATCTGATGTTCCCAAAGGCCACATCGGCAGTCTACGTGGGAGAGATTCAAAGGAAGAGATTTGTGATCTACTCAATAGATCA
GAAGAAGAATTCGGATTTTGCCATCCAATGGGTGGCTTGACGATTCCATGCAGAGAAGATGCTTTCTTAAATCTCACTGATAGGCATCCTTGTATTCTGACCTTT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCA
GTTTACGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCAGAGGAGAAGTTTGGC
TTCCATCATCCTCAAGGCGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCAAAATGAGGTCGTGTTAATGGAATTTGGACCC
TATTGTATGCAAAGGTTGTCTTTCTGTTCCATTTTGAACATGAAATTCACTAACAAAGAAACTCATTTACATTCCAAAAGGCTTAAGATTGTATTCGTGCACAAG
TTAGAAAGAAATCAATTCGGGAAAAAAATGAGTCAAAAATTGATTGATGCCTATTCCAGCATCTTCATCCTTCAAGAGTGTTGCAGTCTAGAAAGTTATGAAGAG
AGAAGTGGCCTAAGTATTTCCAGTGAGCTTAAAAGTGGCTCACTAGCATCGCCATTCTCATCCAACAAGTACTCTATTTCCTACATCAAATTCAAAATCAAGCAG
AACACCATTCAAAGTCAGTCACCCCTCTCTTGTTTTGAGGAAATTTTCGATATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATG
CAAGCTCTATCTGCAAGAAATCAATCTGATGTTCCCAAAGGCCACATCGGCAGTCTACGTGGGAGAGATTCAAAGGAAGAGATTTGTGATCTACTCAATAGATCA
GAAGAAGAATTCGGATTTTGCCATCCAATGGGTGGCTTGACGATTCCATGCAGAGAAGATGCTTTCTTAAATCTCACTGATAGGCATCCTTGTATTCTGACCTTT
TGA
Protein sequenceShow/hide protein sequence
MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQNEVVLMEFGP
YCMQRLSFCSILNMKFTNKETHLHSKRLKIVFVHKLERNQFGKKMSQKLIDAYSSIFILQECCSLESYEERSGLSISSELKSGSLASPFSSNKYSISYIKFKIKQ
NTIQSQSPLSCFEEIFDMGIRLPSILLNAKQILKMQALSARNQSDVPKGHIGSLRGRDSKEEICDLLNRSEEEFGFCHPMGGLTIPCREDAFLNLTDRHPCILTF