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CmoCh20G007930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3930682..3930924
RNA-Seq ExpressionCmoCh20G007930
SyntenyCmoCh20G007930
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3796.25Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTVS RNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

KAG6571057.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3898.75Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTVSPRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.9e-3796.25Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTVS RNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022944372.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.1e-3695Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTVS RNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCRE+VFINLTS LQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]2.9e-3796.25Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTV  RNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein3.5e-3692.5Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        M TVS RNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALL++AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like3.5e-3692.5Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        M TVS RNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALL++AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like1.4e-3796.25Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTVS RNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1FVI6 auxin-responsive protein SAUR21-like5.4e-3795Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTVS RNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCRE+VFINLTS LQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

A0A6J1JGW3 auxin-responsive protein SAUR21-like1.4e-3796.25Show/hide
Query:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        MQTV  RNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALL+TAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
Subjt:  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR224.3e-2369.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.2e-2269.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR205.6e-2371.21Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.2e-2269.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR242.5e-2371.21Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.8e-2463.51Show/hide
Query:  NQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS
        N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL  AEEEFGF HP GGLTIPC E +FI+L SRL TS
Subjt:  NQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS

AT4G34800.1 SAUR-like auxin-responsive protein family4.0e-2469.01Show/hide
Query:  SPRNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINL
        S + Q  VPKGH+AVYVG+    +KRFVVPISYLNHPSF  LL  AEEEFGF HP GGLTIPCRE+ F+ L
Subjt:  SPRNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINL

AT4G34810.1 SAUR-like auxin-responsive protein family3.1e-2471.83Show/hide
Query:  VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINL-TSRLQ
        VPKGH+AVYVG   ++E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L  SRLQ
Subjt:  VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINL-TSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family3.1e-2469.7Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.8e-2471.21Show/hide
Query:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACCGTTTCGCCTAGAAATCAATGTGGCGTTCCCAAAGGTCATATTGCAGTCTATGTGGGGGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAA
TCATCCGTCTTTCTCAGCTTTGCTCGAGACTGCAGAAGAAGAATTTGGATTTAAACATCCAACGGGAGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCA
CATCCAGGCTGCAAACGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGACCGTTTCGCCTAGAAATCAATGTGGCGTTCCCAAAGGTCATATTGCAGTCTATGTGGGGGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAA
TCATCCGTCTTTCTCAGCTTTGCTCGAGACTGCAGAAGAAGAATTTGGATTTAAACATCCAACGGGAGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCA
CATCCAGGCTGCAAACGTCCTGA
Protein sequenceShow/hide protein sequence
MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS