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CmoCh20G007950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G007950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationCmo_Chr20:3931970..3936305
RNA-Seq ExpressionCmoCh20G007950
SyntenyCmoCh20G007950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]7.9e-0686.67Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLK+AEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
KAG6605014.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]7.9e-0686.67Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLK+AEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]3.6e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]3.6e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
XP_022146165.1 auxin-responsive protein SAUR21-like [Momordica charantia]4.7e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein1.7e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
A0A1S3C787 auxin-responsive protein SAUR21-like1.7e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
A0A5D3BMR1 Auxin-responsive protein SAUR21-like1.7e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
A0A6J1CWI4 auxin-responsive protein SAUR21-like2.3e-0690Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLKSAEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
A0A6J1JGW3 auxin-responsive protein SAUR21-like3.8e-0686.67Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        + ALLK+AEEEFGFKHPTGGLTIPCRED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
SwissProt top hitse value%identityAlignment
P33080 Auxin-induced protein X10A1.7e-0668.75Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKFRT
        +Q LL  AEEEFG+ HP GGLTIPC+ED+F T
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKFRT
Q9FJF6 Auxin-responsive protein SAUR233.7e-0673.33Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        +QALL  +EEEFGF HP GGLTIPC ED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
Q9FJF9 Auxin-responsive protein SAUR213.7e-0673.33Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        +QALL  +EEEFGF HP GGLTIPC ED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
Q9FJG0 Auxin-responsive protein SAUR202.2e-0665.79Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF--RTSKFK
        +QALL  +EEEFGF HP GGLTIPC ED F   TS+F+
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF--RTSKFK
Q9FJG1 Auxin-responsive protein SAUR193.7e-0673.33Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        +QALL  +EEEFGF HP GGLTIPC ED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
Arabidopsis top hitse value%identityAlignment
AT2G21200.1 SAUR-like auxin-responsive protein family9.0e-0876.67Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        +QALL +AEEEFGF HP GGLTIPC ED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
AT3G03820.1 SAUR-like auxin-responsive protein family9.0e-0875Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKFRT
        +QALL  AEEEFGF HP GGLTIPC ED F T
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKFRT
AT4G34800.1 SAUR-like auxin-responsive protein family1.5e-0773.33Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        +Q LL  AEEEFGF HP GGLTIPCRE+ F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
AT5G18010.1 SAUR-like auxin-responsive protein family2.6e-0773.33Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
        +QALL  +EEEFGF HP GGLTIPC ED F
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF
AT5G18020.1 SAUR-like auxin-responsive protein family1.5e-0765.79Show/hide
Query:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF--RTSKFK
        +QALL  +EEEFGF HP GGLTIPC ED F   TS+F+
Subjt:  YQALLKSAEEEFGFKHPTGGLTIPCREDKF--RTSKFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCAAATTGTCAAAATGCAGACCGTTCCATCTAGAAATCAATGTAGCGTTCCCAAAGGCTATATTGCAGTCTATGTGGGAGATACTGAAAGGAGACGGTTCATG
GTTCCAATATCAAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGTAGAGAAGATAAGTTTAGAACTTCGAAGT
TCAAGCACTTGACAACGAACCCAAGGCCTGAAGAGACCATGTTCTGGAATCTGCAGCTTGTCCGATTAATACGACGGAAAGGGGTTTCCATGAGGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCAAATTGTCAAAATGCAGACCGTTCCATCTAGAAATCAATGTAGCGTTCCCAAAGGCTATATTGCAGTCTATGTGGGAGATACTGAAAGGAGACGGTTCATG
GTTCCAATATCAAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGTAGAGAAGATAAGTTTAGAACTTCGAAGT
TCAAGCACTTGACAACGAACCCAAGGCCTGAAGAGACCATGTTCTGGAATCTGCAGCTTGTCCGATTAATACGACGGAAAGGGGTTTCCATGAGGTTATAG
Protein sequenceShow/hide protein sequence
MPSKLSKCRPFHLEINVAFPKAILQSMWEILKGDGSWFQYQALLKSAEEEFGFKHPTGGLTIPCREDKFRTSKFKHLTTNPRPEETMFWNLQLVRLIRRKGVSMRL