; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G008010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr20:3952128..3952415
RNA-Seq ExpressionCmoCh20G008010
SyntenyCmoCh20G008010
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457626.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]1.1e-4394.68Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQS
        MGFRLPSSLIPQAKQLL+RSSGN SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQS

XP_022944378.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]4.1e-46100Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

XP_022947579.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]8.6e-4494.74Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSGN SAVPKGHVAVYVGEF+RKRFVIPISYLNH SFQQLL+RAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

XP_022986738.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]1.2e-4597.89Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPI+YLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

XP_023512614.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]5.4e-4698.95Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

TrEMBL top hitse value%identityAlignment
A0A1S3C5H8 auxin-responsive protein SAUR24-like5.4e-4494.68Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQS
        MGFRLPSSLIPQAKQLL+RSSGN SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQS

A0A5A7TUZ6 Auxin-responsive protein SAUR24-like5.4e-4494.68Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQS
        MGFRLPSSLIPQAKQLL+RSSGN SAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQS

A0A6J1FY01 auxin-responsive protein SAUR24-like2.0e-46100Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

A0A6J1G776 auxin-responsive protein SAUR24-like4.2e-4494.74Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSGN SAVPKGHVAVYVGEF+RKRFVIPISYLNH SFQQLL+RAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

A0A6J1JHE8 auxin-responsive protein SAUR24-like5.8e-4697.89Show/hide
Query:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPI+YLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAF+DLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.4e-2565Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRL
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LL+++EEEFGFDHP GGLTIPC ED F+++TSRL
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRL

Q9FJF7 Auxin-responsive protein SAUR226.4e-2664.2Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LL+++E+EFGFDHP GGLTIPC ED F+++TSRLQ
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.9e-2666.67Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+  ASA PKG +AVYVGE Q+KR+++PISYLN  SFQ LL+++EEEFGFDHP GGLTIPC ED F+++TSR Q
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR199.3e-2562.96Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LL+++EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.5e-2766.67Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LL+++EEEFGFDHP GGLTIPC ED F+++TSRLQ
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.7e-2660.87Show/hide
Query:  SSLIPQAKQLLK--RSSGNASAVPKGHVAVYVGE-FQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS
        S ++  +KQLLK    S N  A+PKGH+AVYVGE  Q++RFV+P++YL+H  FQ+LL +AEEEFGFDHP GGLTIPC E  F+DL SRL +S
Subjt:  SSLIPQAKQLLK--RSSGNASAVPKGHVAVYVGE-FQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS

AT5G18020.1 SAUR-like auxin-responsive protein family2.1e-2766.67Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+  ASA PKG +AVYVGE Q+KR+++PISYLN  SFQ LL+++EEEFGFDHP GGLTIPC ED F+++TSR Q
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family4.6e-2764.2Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LL+++E+EFGFDHP GGLTIPC ED F+++TSRLQ
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ

AT5G18060.1 SAUR-like auxin-responsive protein family1.7e-2665Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRL
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LL+++EEEFGFDHP GGLTIPC ED F+++TSRL
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family3.2e-2866.67Show/hide
Query:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ
        AK++L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LL+++EEEFGFDHP GGLTIPC ED F+++TSRLQ
Subjt:  AKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCAGTTGCTGAAGAGGAGCTCCGGAAATGCATCGGCGGTTCCGAAAGGTCATGTGGCCGTCTACGTTGG
AGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTAAATCGAGCGGAGGAAGAGTTTGGATTTGATCATCCAGAAG
GCGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTGTCGATCTCACTTCTAGATTGCAATCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCAGTTGCTGAAGAGGAGCTCCGGAAATGCATCGGCGGTTCCGAAAGGTCATGTGGCCGTCTACGTTGG
AGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTAAATCGAGCGGAGGAAGAGTTTGGATTTGATCATCCAGAAG
GCGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTGTCGATCTCACTTCTAGATTGCAATCCTCTTAA
Protein sequenceShow/hide protein sequence
MGFRLPSSLIPQAKQLLKRSSGNASAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLNRAEEEFGFDHPEGGLTIPCGEDAFVDLTSRLQSS