; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G008040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3960038..3962188
RNA-Seq ExpressionCmoCh20G008040
SyntenyCmoCh20G008040
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571065.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]1.1e-48100Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP
        MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP

KAG6605034.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3677.08Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L ++VNA+QN+ LSSLTTH+ SSAIRKGYCAVYVG+S+KKRF+IP+ YLNEPFFKDLL++V EEFGY+HPMGGLTIPCSD TF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

KGN61865.1 hypothetical protein Csa_006212 [Cucumis sativus]6.0e-3983.33Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L R+VN +QNI LSSLTTH+ SSAIRKGYCAVYVGE++KKRFVIPI YLNEPFFKDLLS+VGEEFGYNHPMGGLTIPCS+DTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

XP_008457943.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]2.4e-4086.46Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L R+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIPI YLN+PFFKDLLS+VGEEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

XP_038902470.1 auxin-induced protein 15A-like [Benincasa hispida]4.1e-4086.46Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF LAR+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIP+ YLNEPFFKDLLS+V EEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

TrEMBL top hitse value%identityAlignment
A0A0A0LIY4 SAUR family protein2.9e-3983.33Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L R+VN +QNI LSSLTTH+ SSAIRKGYCAVYVGE++KKRFVIPI YLNEPFFKDLLS+VGEEFGYNHPMGGLTIPCS+DTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

A0A0A0LM55 Uncharacterized protein1.1e-3374.47Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        MGF +A++VNAV NIGLSSL T+ + S +RKGYCAVYVGES++KRFVIPI+YLN PFFKDLL +  EEFGYNHP GGLTIPCSDDTF+ LIS L
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

A0A1S3C683 auxin-responsive protein SAUR21-like1.2e-4086.46Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L R+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIPI YLN+PFFKDLLS+VGEEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

A0A5D3BN78 Auxin-responsive protein SAUR21-like1.2e-4086.46Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L R+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIPI YLN+PFFKDLLS+VGEEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

A0A6J1CXQ4 auxin-responsive protein SAUR24-like8.7e-3675Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE
        MGF L R+VNAVQ++ LSSLTT++ SS +R+GYCAVYVGES+KKRFVIP+ YLNEP F+DLLS+  EE+GYNHPMGGLTIPCSDDTF+ LISRL+E
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B1.3e-2052.63Show/hide
Query:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLS
        MGF L      ++    S+     K+  + KGY AVYVGE K +RFVIP++YLN+P F+DLLS+  EEFGY+HP GGLTIPCS+D F H+ S L+
Subjt:  MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLS

Q9FJF6 Auxin-responsive protein SAUR231.7e-2063.24Show/hide
Query:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

Q9FJF9 Auxin-responsive protein SAUR215.8e-2153.75Show/hide
Query:  IGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        +G   + +   +SA  KG+ AVYVGES+KKR+++P++YL++P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  IGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

Q9FJG0 Auxin-responsive protein SAUR209.9e-2161.04Show/hide
Query:  LSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISR
        LS  TT   +SA  KG+ AVYVGES+KKR+++PI+YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SR
Subjt:  LSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISR

Q9FK62 Auxin-responsive protein SAUR247.6e-2163.24Show/hide
Query:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family7.1e-2261.04Show/hide
Query:  LSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISR
        LS  TT   +SA  KG+ AVYVGES+KKR+++PI+YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SR
Subjt:  LSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISR

AT5G18030.1 SAUR-like auxin-responsive protein family4.1e-2253.75Show/hide
Query:  IGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        +G   + +   +SA  KG+ AVYVGES+KKR+++P++YL++P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  IGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

AT5G18050.1 SAUR-like auxin-responsive protein family1.6e-2161.76Show/hide
Query:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  +EFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

AT5G18060.1 SAUR-like auxin-responsive protein family1.2e-2163.24Show/hide
Query:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL

AT5G18080.1 SAUR-like auxin-responsive protein family5.4e-2263.24Show/hide
Query:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL
        SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DTF+++ SRL
Subjt:  SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCACCGAACAGGAAACCGAGTTTTCTTCGTCTACAAGCACTGTCCTCAACATCAAGAGTTATTGGAAACTTGGACATCCACTCATTGAGAGGGAATGTTGCCGG
TCAGCTTTCATGTGAACTTCAAAAAGGCAGGATCTCTCAATCTGCATCTGCTCAAATGGGTCCAGTATTTGCGAGGTTTACCAAAATGTTAGTTCACCACCAAGTTTTCC
CTTTTTCTCTCGACTGCTATTGTGCTACTTCTACATTCCAAAATTCAAGACCCTTCAACTTCCTGAGAGAAAAACAAAAAACCATGGGTTTCCATTTGGCGAGAGTGGTA
AATGCTGTGCAAAATATTGGACTTTCTTCTCTAACAACACACTACAAATCGTCGGCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCAAAAAGAAGCGGTT
TGTGATTCCAATTACTTACTTGAACGAGCCATTTTTCAAGGACTTGTTAAGTCGAGTTGGAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTTACTATTCCTTGCA
GCGATGATACATTCCTTCATCTCATCTCTCGTCTAAGTGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
GCAAAACTGTGTGGATGGTTGATCTTTCTTCTCCATCTCTCATAATATCTGCAACCTAGAAGTGAGATCAATGAAGGTCTCTTCTCTGCAGGGAATTGTCAGACCACCCA
TTGGATGATTGAATCCAAACTCTTCCTCGGCCCTTTTTAGTAGATTTAGAAAAGAAGGATGGTTCAAATAAGGAATTGGAACCACAAATCTCCTTGTTTGGTTTTCCCCC
ACATAGACTGCAATATGTCCTTTGGGAATATTGGACTTTACTTTTGAAGAAGGGCCCTGCATTTTGAGAATTTGCTTGGTATGAAGAAGAATTGAAGGCAAACGGATTCC
CATTTTTAAATCTTCTTGAAGTGAAAGAAGAACAAGCAACTGTCAGTCGTTGTGGCCGATGTTGATCTTGAAGTAAAAATCTGCAATACTTGGGATGATAATCTCTCTGC
AGTTCGAGTTGGGAGATGGTTGTTCATTTGGTTTGAATGTATATATATAGAGTGAGGAAGAGGAGGTGTGAACAAAAGAATATCAAAGTAGGTGTCTGGTTGGACCTACA
TCATCAAGGCTCACATGGGGTTGCAAAATTGGTTGAAACACACTCGTTTTCTCATTTGGCGCAGCTTCTGATGGTACACATCCACTGTTTAATGGGAAGATATTAGAGAA
GAAAACAAGTGGTCAAGGAAAACCAAAAATCAAATGCTGTGACCAAGAAAATAAACAGACAAAAAAAATCAATGTGATAAGAAATATTATTAAAACTTTACTGGTTTGTA
TCCATCAGATGCCCCCACCGAACAGGAAACCGAGTTTTCTTCGTCTACAAGCACTGTCCTCAACATCAAGAGTTATTGGAAACTTGGACATCCACTCATTGAGAGGGAAT
GTTGCCGGTCAGCTTTCATGTGAACTTCAAAAAGGCAGGATCTCTCAATCTGCATCTGCTCAAATGGGTCCAGTATTTGCGAGGTTTACCAAAATGTTAGTTCACCACCA
AGTTTTCCCTTTTTCTCTCGACTGCTATTGTGCTACTTCTACATTCCAAAATTCAAGACCCTTCAACTTCCTGAGAGAAAAACAAAAAACCATGGGTTTCCATTTGGCGA
GAGTGGTAAATGCTGTGCAAAATATTGGACTTTCTTCTCTAACAACACACTACAAATCGTCGGCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCAAAAAG
AAGCGGTTTGTGATTCCAATTACTTACTTGAACGAGCCATTTTTCAAGGACTTGTTAAGTCGAGTTGGAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTTACTAT
TCCTTGCAGCGATGATACATTCCTTCATCTCATCTCTCGTCTAAGTGAGCCATGA
Protein sequenceShow/hide protein sequence
MPPPNRKPSFLRLQALSSTSRVIGNLDIHSLRGNVAGQLSCELQKGRISQSASAQMGPVFARFTKMLVHHQVFPFSLDCYCATSTFQNSRPFNFLREKQKTMGFHLARVV
NAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP