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CmoCh20G008050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr20:3960077..3960370
RNA-Seq ExpressionCmoCh20G008050
SyntenyCmoCh20G008050
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147006.1 auxin-responsive protein SAUR23 [Cucumis sativus]1.4e-4191.49Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
        MGIRLPSILLHTKQILK+QG S+KVKS+IPKGHIAVYVGE QT+RFVVPI +LNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL

XP_022944364.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]3.4e-48100Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
        MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL

XP_022986648.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]2.7e-4596.91Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
        MGIRLPSILLHTKQILKMQG SSKVKSNIPKGHIAVYVGE QTRRFVVPI YLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL

XP_023512609.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.9e-4495.88Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
        MGIRLPSILL TKQILKMQG SSKVKSNIPKGHIAVYVGE QTRRFVVPI YLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL

XP_038901144.1 auxin-responsive protein SAUR23-like [Benincasa hispida]5.7e-4392.71Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQI
        MGIRLPSILLHTKQILKMQG SSKVKS+IPKGHIAVYVGE QT+RFVVPI +LNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL I
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQI

TrEMBL top hitse value%identityAlignment
A0A0A0LPG7 Uncharacterized protein6.8e-4291.49Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
        MGIRLPSILLHTKQILK+QG S+KVKS+IPKGHIAVYVGE QT+RFVVPI +LNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL

A0A1S3C778 auxin-responsive protein SAUR23-like9.8e-4188.3Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
        MGIRLPSILLHTKQILK+QG S+KVKS++P+GHIAVYVGE QT+RFVVPI +LNHPSFLNLLK AEEEFGFNHPMGGLTIPCREETFIDLTSRL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL

A0A6J1CXW2 auxin-responsive protein SAUR23-like4.1e-3988.3Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
        MGIRLPSILL+ KQILKMQ  SSK K +IPKGHIAVYVGE QT+RFVVPI YLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREE FIDLTSRL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL

A0A6J1FWK3 auxin-responsive protein SAUR21-like1.7e-48100Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
        MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL

A0A6J1JH54 auxin-responsive protein SAUR21-like1.3e-4596.91Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
        MGIRLPSILLHTKQILKMQG SSKVKSNIPKGHIAVYVGE QTRRFVVPI YLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR222.3e-2359.77Show/hide
Query:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ
        LL  K+IL     S+   S  PKG +AVYVGE+Q +R++VP+ YLN PSF  LL ++E+EFGF+HPMGGLTIPC E+TFI++TSRLQ
Subjt:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR216.8e-2359.77Show/hide
Query:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ
        LL  K+IL     S    S  PKG +AVYVGE+Q +R++VP+ YL+ PSF  LL ++EEEFGF+HPMGGLTIPC E+TFI++TSRLQ
Subjt:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.3e-2360.92Show/hide
Query:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ
        LL  K+IL     S+   S  PKG +AVYVGE+Q +R++VPI YLN PSF  LL ++EEEFGF+HPMGGLTIPC E+TFI++TSR Q
Subjt:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.5e-2259.77Show/hide
Query:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ
        LL  K+IL     S+   S  PKG +AVYVGE+Q +R++VP+ YL+ PSF  LL ++EEEFGF HPMGGLTIPC E+TFI++TSRLQ
Subjt:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2360.92Show/hide
Query:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ
        LL  K+IL     S+   S  PKG +AVYVGE+Q +R++VP+ YLN PSF  LL ++EEEFGF+HPMGGLTIPC E+TFI++TSRLQ
Subjt:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.6e-2763.16Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGE-NQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL
        M IR+  +L  +KQ+LK    SS     IPKGH+AVYVGE  Q RRFVVP+ YL+HP F  LL++AEEEFGF+HPMGGLTIPC E+ FIDL SRL
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGE-NQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL

AT4G34800.1 SAUR-like auxin-responsive protein family4.0e-2664.13Show/hide
Query:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGE--NQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDL
        M IRL S ++++KQ       S K +S +PKGH+AVYVGE     +RFVVPI YLNHPSF  LL RAEEEFGFNHP+GGLTIPCREETF+ L
Subjt:  MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGE--NQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDL

AT4G34810.1 SAUR-like auxin-responsive protein family1.6e-2760Show/hide
Query:  MGIRLPSILLHTKQILKMQG------PSSKVKSNIPKGHIAVYVGEN---QTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDL-
        MG+   +I   TKQILK+         SS    ++PKGH+AVYVGE    + +RFVVPI +LNHPSF   L RAEEEFGFNHPMGGLTIPCREE F+DL 
Subjt:  MGIRLPSILLHTKQILKMQG------PSSKVKSNIPKGHIAVYVGEN---QTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family2.5e-2858.76Show/hide
Query:  MGIRLPSILLHTKQILK----MQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR
        M IR+P +L  +KQIL+    +   SS    ++PKG++AVYVGE   +RFVVP+ YL+ PSF +LL++AEEEFGF+HPMGGLTIPC EE FIDL SR
Subjt:  MGIRLPSILLHTKQILK----MQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2460.92Show/hide
Query:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ
        LL  K+IL     S+   S  PKG +AVYVGE+Q +R++VP+ YLN PSF  LL ++EEEFGF+HPMGGLTIPC E+TFI++TSRLQ
Subjt:  LLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCCCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTA
TGTGGGGGAAAACCAAACAAGGAGATTTGTGGTTCCAATTCCTTATTTGAACCATCCTTCTTTTCTAAATCTACTAAAAAGGGCCGAGGAAGAGTTTGGATTCAATCATC
CAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGTTGCAGATATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCCCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTA
TGTGGGGGAAAACCAAACAAGGAGATTTGTGGTTCCAATTCCTTATTTGAACCATCCTTCTTTTCTAAATCTACTAAAAAGGGCCGAGGAAGAGTTTGGATTCAATCATC
CAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGTTGCAGATATTATGA
Protein sequenceShow/hide protein sequence
MGIRLPSILLHTKQILKMQGPSSKVKSNIPKGHIAVYVGENQTRRFVVPIPYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLQIL