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CmoCh20G008070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
Genome locationCmo_Chr20:3978662..3978994
RNA-Seq ExpressionCmoCh20G008070
SyntenyCmoCh20G008070
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147005.1 auxin-responsive protein SAUR50 [Cucumis sativus]1.2e-4991.82Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K NKLPQSTVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_008457621.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]2.7e-4990Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR+IVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_022943433.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.3e-56100Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_022947563.1 auxin-responsive protein SAUR50 [Cucurbita moschata]6.7e-4890Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI+K NKLPQ TVLKQILKRCSSLG+KTNN   YD D+DLP+DVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_038900691.1 auxin-responsive protein SAUR50 [Benincasa hispida]8.4e-5191.82Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K++N  AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ77 Uncharacterized protein5.9e-5091.82Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K NKLPQSTVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A1S3C616 auxin-induced protein 15A1.3e-4990Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR+IVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A5D3BIH0 Auxin-induced protein 15A1.3e-4990Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K+NN  AYDAD++LPLDVPKGHFAVYVGENRSR+IVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A6J1FWX1 auxin-responsive protein SAUR50-like6.5e-57100Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A6J1J850 auxin-responsive protein SAUR50-like6.5e-57100Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR506.1e-3673.08Show/hide
Query:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR
        ++K +KL Q+ +LKQILKRCSSLG+K  N   YD +D LPLDVPKGHF VYVGENRSR+IVPIS LTHPEFQ LL++AEEEFGFDH MGLTIPC E VF+
Subjt:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR

Query:  SLTS
        +LTS
Subjt:  SLTS

P0DKL1 Auxin-responsive protein SAUR502.8e-2554.81Show/hide
Query:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR
        I+K +K  Q+  +K+I+K+CSS G+  +       D  LP DVPKGHF VYVGE R+R+IVPIS L HP FQ LL+++EEEFGF+H MG+ IPCQE  F 
Subjt:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR

Query:  SLTS
        S  S
Subjt:  SLTS

P32295 Indole-3-acetic acid-induced protein ARG75.7e-1862.69Show/hide
Query:  LDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM
        LD PKG+ AVYVGEN  RF++P+S L  P FQ LL QAEEEFG+DH M GLTIPC E +F+ +TS +
Subjt:  LDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM

P33081 Auxin-induced protein 15A1.3e-1762.12Show/hide
Query:  DVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM
        D PKG+ AVYVGE   RF++P+S L  P FQ LL QAEEEFG+DH M GLTIPC E VF+ +TS +
Subjt:  DVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 104.1e-3266.06Show/hide
Query:  MAIQKLNKL--PQSTVLKQILKRCSSLGRKTN-NACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ
        MAI++ +K    Q+  +KQI+KRCSSL +  N N C Y+ +DDLP DVPKGHF VYVG NRSR+IVPIS L H EFQ LLR AEEEFGFDH MGLTIPC 
Subjt:  MAIQKLNKL--PQSTVLKQILKRCSSLGRKTN-NACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ

Query:  EHVFRSLTS
        E  FRSL S
Subjt:  EHVFRSLTS

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family1.8e-3564.91Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKT----NNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPC
        MAI   +KL Q+T++KQILKRCSSLG+K     N+   +D  D LPLDVPKGHF VYVG NR R+++PIS LT PEFQ LL+QAEEEFGFDH MGLTIPC
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKT----NNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPC

Query:  QEHVFRSLTSSMLR
        +E  F+SL +SML+
Subjt:  QEHVFRSLTSSMLR

AT1G75580.1 SAUR-like auxin-responsive protein family1.9e-3770Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MA++K NKL Q+ ++KQILKRCSSLG+K +N    D ++  PL+VPKGHF VYVGENR R++VPIS LT PEFQ LL+QAEEEFGFDH MGLTIPC+E V
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLT SMLR
Subjt:  FRSLTSSMLR

AT2G16580.1 SAUR-like auxin-responsive protein family2.6e-3468.27Show/hide
Query:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR
        ++K  KL Q+ +L+QILKRCSSLG+K N    Y+ + DLPLDVPKGHF VYVG NRSR+IVPIS LT+ +FQCLLR+AEEEFGFDH MGLTIPC E  F+
Subjt:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR

Query:  SLTS
         LTS
Subjt:  SLTS

AT2G21220.1 SAUR-like auxin-responsive protein family1.4e-3569.81Show/hide
Query:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MA+++ +KL Q+ +LKQILKRCSSL +   N C YD +D LP+DVPKGHF VYVGE RSR+IVPIS LTHP+F+ LL+QAEEEFGF+H MGLTIPC+E V
Subjt:  MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTS
        FRSLTS
Subjt:  FRSLTS

AT4G34760.1 SAUR-like auxin-responsive protein family4.3e-3773.08Show/hide
Query:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR
        ++K +KL Q+ +LKQILKRCSSLG+K  N   YD +D LPLDVPKGHF VYVGENRSR+IVPIS LTHPEFQ LL++AEEEFGFDH MGLTIPC E VF+
Subjt:  IQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR

Query:  SLTS
        +LTS
Subjt:  SLTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCAAAAGCTTAACAAACTCCCCCAATCCACCGTCCTCAAGCAAATCCTCAAACGTTGCTCGAGCCTCGGTCGAAAGACCAACAACGCCTGTGCCTACGACGC
CGACGACGACCTCCCCCTCGACGTCCCCAAGGGTCATTTCGCTGTCTACGTCGGCGAAAATCGTAGCCGATTCATCGTCCCTATCTCCGTCCTTACTCACCCTGAATTCC
AATGCTTACTCCGTCAAGCAGAAGAAGAATTCGGATTCGACCACTACATGGGTCTCACCATCCCTTGCCAAGAACACGTCTTCAGATCCTTAACATCCTCCATGCTTCGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCAAAAGCTTAACAAACTCCCCCAATCCACCGTCCTCAAGCAAATCCTCAAACGTTGCTCGAGCCTCGGTCGAAAGACCAACAACGCCTGTGCCTACGACGC
CGACGACGACCTCCCCCTCGACGTCCCCAAGGGTCATTTCGCTGTCTACGTCGGCGAAAATCGTAGCCGATTCATCGTCCCTATCTCCGTCCTTACTCACCCTGAATTCC
AATGCTTACTCCGTCAAGCAGAAGAAGAATTCGGATTCGACCACTACATGGGTCTCACCATCCCTTGCCAAGAACACGTCTTCAGATCCTTAACATCCTCCATGCTTCGA
TGA
Protein sequenceShow/hide protein sequence
MAIQKLNKLPQSTVLKQILKRCSSLGRKTNNACAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISVLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR