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CmoCh20G008130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:4021854..4024886
RNA-Seq ExpressionCmoCh20G008130
SyntenyCmoCh20G008130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571073.1 hypothetical protein SDJN03_29988, partial [Cucurbita argyrosperma subsp. sororia]6.0e-38100Show/hide
Query:  MVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFETTRMEERDHWN
        MVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFETTRMEERDHWN
Subjt:  MVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFETTRMEERDHWN
XP_022986641.1 uncharacterized protein LOC111484319 [Cucurbita maxima]9.6e-3697.37Show/hide
Query:  VLVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFE
        +LVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTT NCAVEDRSMDRLGMREMSCCPAFE
Subjt:  VLVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFE
XP_023511799.1 uncharacterized protein LOC111776708 [Cucurbita pepo subsp. pepo]4.3e-5291.82Show/hide
Query:  MGIFWRCDEGSISSILHLCV-----LVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFE
        MGIFWRCD+ SISSILHLCV     LVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMRE+SCCPAFE
Subjt:  MGIFWRCDEGSISSILHLCV-----LVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFE

Query:  TTRMEERDHW
         TRMEERDHW
Subjt:  TTRMEERDHW
TrEMBL top hitse value%identityAlignment
A0A6J1JBS2 uncharacterized protein LOC1114843194.7e-3697.37Show/hide
Query:  VLVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFE
        +LVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTT NCAVEDRSMDRLGMREMSCCPAFE
Subjt:  VLVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTTTCTGGCGTTGTGATGAAGGGTCAATATCATCCATATTACACTTGTGTGTGTTGGTTTGGATTTGTCATTACAGGATGGTGCGGTTGGGGATGGAGCTTAT
CTGTTCATGCAATGCCCCTATCGGTTTGCTGTCCACAGACTGCTGTGTGCTGCTCTGTCCAATCTTTTTCAGCCTCAGATTGGTCCTGTGGTCAACAACTGGAAACTGTG
CGGTAGAGGATCGGTCGATGGATCGTCTTGGGATGAGAGAAATGTCATGCTGCCCTGCATTTGAGACGACAAGGATGGAGGAAAGAGATCATTGGAATGACTATAATTTG
TGTTCATTCGAGTTTACACGTCAAAGAGCTCGCGCTTTATCATCATCGACTCTGACGAGCCCACGAACAATTTCAACCTGCAATACTCAAAACGTTGCTTTTTCAACCTG
CAATACTCAAAACGTTGCTTTCCACATTAGAGCTACAAGGACGTTGCTTTTCACATTAGAGCTACAAGGAAAAAGTATGTCCAAAACTAGAGTCATTGTATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTTTCTGGCGTTGTGATGAAGGGTCAATATCATCCATATTACACTTGTGTGTGTTGGTTTGGATTTGTCATTACAGGATGGTGCGGTTGGGGATGGAGCTTAT
CTGTTCATGCAATGCCCCTATCGGTTTGCTGTCCACAGACTGCTGTGTGCTGCTCTGTCCAATCTTTTTCAGCCTCAGATTGGTCCTGTGGTCAACAACTGGAAACTGTG
CGGTAGAGGATCGGTCGATGGATCGTCTTGGGATGAGAGAAATGTCATGCTGCCCTGCATTTGAGACGACAAGGATGGAGGAAAGAGATCATTGGAATGACTATAATTTG
TGTTCATTCGAGTTTACACGTCAAAGAGCTCGCGCTTTATCATCATCGACTCTGACGAGCCCACGAACAATTTCAACCTGCAATACTCAAAACGTTGCTTTTTCAACCTG
CAATACTCAAAACGTTGCTTTCCACATTAGAGCTACAAGGACGTTGCTTTTCACATTAGAGCTACAAGGAAAAAGTATGTCCAAAACTAGAGTCATTGTATGTTGA
Protein sequenceShow/hide protein sequence
MGIFWRCDEGSISSILHLCVLVWICHYRMVRLGMELICSCNAPIGLLSTDCCVLLCPIFFSLRLVLWSTTGNCAVEDRSMDRLGMREMSCCPAFETTRMEERDHWNDYNL
CSFEFTRQRARALSSSTLTSPRTISTCNTQNVAFSTCNTQNVAFHIRATRTLLFTLELQGKSMSKTRVIVC