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CmoCh20G008140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionComplex I-B22
Genome locationCmo_Chr20:4024363..4028206
RNA-Seq ExpressionCmoCh20G008140
SyntenyCmoCh20G008140
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]6.3e-5793.1Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PP GIEIIY+YGREDH
Subjt:  PPPGIEIIYNYGREDH

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]1.1e-61100Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PPPGIEIIYNYGREDH
Subjt:  PPPGIEIIYNYGREDH

XP_023007340.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita maxima]2.2e-5792.24Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALK+TLNWAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PPPG+EIIYNYGREDH
Subjt:  PPPGIEIIYNYGREDH

XP_023532128.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]2.2e-5793.1Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANK+VED+D ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PPPGIEIIY+YGREDH
Subjt:  PPPGIEIIYNYGREDH

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]5.7e-5894.83Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A+KHVEDLD IDR+IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PP GIEIIY YGREDH
Subjt:  PPPGIEIIYNYGREDH

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B223.1e-5793.1Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PP GIEIIY+YGREDH
Subjt:  PPPGIEIIYNYGREDH

A0A6J1FYY7 Complex I-B225.4e-62100Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PPPGIEIIYNYGREDH
Subjt:  PPPGIEIIYNYGREDH

A0A6J1G8K3 Complex I-B225.8e-5690.52Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PP G+EIIY+YGREDH
Subjt:  PPPGIEIIYNYGREDH

A0A6J1J845 Complex I-B225.4e-62100Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PPPGIEIIYNYGREDH
Subjt:  PPPGIEIIYNYGREDH

A0A6J1L2P5 Complex I-B221.1e-5792.24Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALK+TLNWAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PPPG+EIIYNYGREDH
Subjt:  PPPGIEIIYNYGREDH

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.1e-1034.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RFD +K+ +D+ +  +++ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 98.7e-0932.99Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RF+ +K+ +D+ R  +++ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 94.3e-0830.93Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RF+ +K+ +D+ +  +++ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 97.5e-5382.76Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F+ N+ VED+DRID++IA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PP GIEI+YNYG ED+
Subjt:  PPPGIEIIYNYGREDH

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.0e-0932.99Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F +   YL      +++V  LY+RAL+   +W +HR  +   A  +R RF+ +K+ +D+ R  +++ + E  + + +HP PYI P +PGG+ F R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein5.4e-5482.76Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F+ N+ VED+DRID++IA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYNYGREDH
        PP GIEI+YNYG ED+
Subjt:  PPPGIEIIYNYGREDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCCCTCAAAGACACTCTCAATTGGGCTGTCCA
TCGCCATCTCTTTTATCGAGATGCGTCGGACCTCCGGGAGAGATTCGATGCAAACAAGCACGTGGAAGATCTTGACAGAATAGATAGGATGATAGCTGATGGAGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCGGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTCCGGGGATCGAGATCATATATAAC
TATGGGCGGGAAGATCACTGA
mRNA sequenceShow/hide mRNA sequence
CATTTACAAAGCCATCTACAGAGGGAGAAAGAGGAAGAAGAGAGAAATGAGCTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGA
TCCTTTACCGGCGAGCCCTCAAAGACACTCTCAATTGGGCTGTCCATCGCCATCTCTTTTATCGAGATGCGTCGGACCTCCGGGAGAGATTCGATGCAAACAAGCACGTG
GAAGATCTTGACAGAATAGATAGGATGATAGCTGATGGAGAAGCTTCCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCGGGTGGTTCTAAGTT
TACGCGAAACCCAACTCCACCTCCGGGGATCGAGATCATATATAACTATGGGCGGGAAGATCACTGAAATCTTCGTTATCATGGTAATAAATAAAGGTAAGCTTACATGT
GGCTGCTTATAAATGCCTGTTTTCCTCGATCTGGATGAAACTCAAATTGGCTTGAAACTGGCTATTATGCTATTCTTGTATTTTTATTTTATTTCTTGCTTATTCACTCC
CATGAAGAGTTTGTATCTTTTGAGCCTTAGTCCTTTCACATTTATTCAATGAAAAGTTTTGTTTCTTGTTCAAAAAGGGAGAAAAAGTGTGTTTTGTATGTGATGCCGGC
CAGATAGTATTATATTATGGTAAAGCGGAGTGAATGTTGAGAAGCGAAAGAAGTTTGTATACTCTGAAAAAGTTAGTTTGTTGTGTGTTGAAGTTTCTAAAGCAGACCAT
CTACGCAATATTACAGTCGACAATAGTTTTCAACATACAATGACTCTAGTTTTGGACATACTTTTTCCTTGTAGCTCTAATGTGAAAAGCAACGTCCTTGTAGCTCTAAT
GTGGAAAGCAACGTTTTGAGTATTGCAGGTTGAAATTGTTCGTGGGCTCGTCAGAGTCGATGATGATAAAGCGCGAGCTCTTTGACGTGTAAACTCGAATGAACACAAAT
TATAGTCATTCCTAGTTGATTTGGTTTCTTCTTATTGCTCAGATATGCAAATTTGACATAGAAAAATCACCATTGGAACGATGTGTGATGCTGCAACTTTTGGTTAATTA
TCCATCCTTTGCAGGATGAGCGGTTTGCCCGATTGCTTGTCATTGCATCAGATGTTTAAATAAATAGGAAATGTTTTTAGCAATTGAGAAGCTAATTTCATTTTTATTGG
GCATCGGTGCTCTTATGACGATTTTTTATTGGAAAGGTTGAACAGGATACTTTCTAGCACGATCTAAAAAAGGTACTTTTCGG
Protein sequenceShow/hide protein sequence
MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYN
YGREDH