; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G008180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:4045330..4049660
RNA-Seq ExpressionCmoCh20G008180
SyntenyCmoCh20G008180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010891.1 hypothetical protein SDJN02_27689 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-10396.92Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARNVNK+CIYIKESFDDILHPYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

XP_022943424.1 uncharacterized protein LOC111448192 [Cucurbita moschata]2.0e-108100Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

XP_022986613.1 uncharacterized protein LOC111484301 [Cucurbita maxima]1.9e-10698.46Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARN+NKVCIYIKESFDDILHPYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

XP_023512006.1 uncharacterized protein LOC111776848 [Cucurbita pepo subsp. pepo]8.6e-10798.97Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

XP_038900455.1 uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida]9.5e-9891.28Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDG QN  PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVPNYIVGETELEASKEGRSLADFKYACVGYSV+LEKKDS NDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVH+KTEDSPAFPQPR YKPSY AGDEYLNRF RNA LVASGVARNVN++C Y+KESFDDIL+PYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

TrEMBL top hitse value%identityAlignment
A0A0A0LIW6 Uncharacterized protein9.6e-9689.23Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDG QN  PNLTSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVPNYIVGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAE+SQAH+H+KTEDSPAFPQPR+YKPSY AGDEYLNRF RNA LVASGVARNVN+VC Y+KES DDIL+PYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

A0A1S3CEZ6 uncharacterized protein LOC1034997215.3e-9488.21Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDES G QN  PN TSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVP YIVGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAE+SQAH+H+KTEDSPAFPQPRNYKPSY AGDEYLNRF RNA LVASGVARNVN+VC Y+KES DDIL+PYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

A0A6J1CWC7 uncharacterized protein LOC1110153994.5e-9387Show/hide
Query:  MDESDGGQNPPPNLTSN---GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPND
        MDES+G QN  PNL+SN   GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNY+VGETELEASKEGR+L DFKYACVGYSV+LEKKDS +D
Subjt:  MDESDGGQNPPPNLTSN---GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPND

Query:  VQNKQAELPFCVGLEVLLDKRPAEHSQA--HVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        V NKQAELPFCVGLEVLLDKRPAEHS A  H+HDKTEDSPAFPQPRNYKPSY+AGDEYLNRF RNA LVASGVARNVN+VC YIKESFDDIL+PYRRRPK
Subjt:  VQNKQAELPFCVGLEVLLDKRPAEHSQA--HVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

A0A6J1FU95 uncharacterized protein LOC1114481929.9e-109100Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

A0A6J1JH16 uncharacterized protein LOC1114843019.3e-10798.46Show/hide
Query:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
        MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN
Subjt:  MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQN

Query:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARN+NKVCIYIKESFDDILHPYRRRPK
Subjt:  KQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51100.1 unknown protein6.9e-4651.09Show/hide
Query:  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEH
        KG+SCKG LYYSS  KSKSK P C+G  +TL QVP+Y+VG++E EASKEGR+LADF Y C+GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  
Subjt:  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEH

Query:  SQAHV-----HDKTEDSPAFPQPRNYKPSYAAG------DEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        + + V     + K       PQ +N KP+ A        + +L RFTRNA LVA+GV +N+ +V  Y+KE+ DD L PYR+RPK
Subjt:  SQAHV-----HDKTEDSPAFPQPRNYKPSYAAG------DEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK

AT3G51100.2 unknown protein7.4e-3251.91Show/hide
Query:  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEH
        KG+SCKG LYYSS  KSKSK P C+G  +TL QVP+Y+VG++E EASKEGR+LADF Y C+GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  
Subjt:  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEH

Query:  SQAHV-----HDKTEDSPAFPQPRNYKPSYA
        + + V     + K       PQ +N KP+ A
Subjt:  SQAHV-----HDKTEDSPAFPQPRNYKPSYA

AT3G51100.3 unknown protein6.3e-3947.83Show/hide
Query:  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEH
        KG+SCKG LYYSS  KSKSK P C+G  +TL Q           EASKEGR+LADF Y C+GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  
Subjt:  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEH

Query:  SQAHV-----HDKTEDSPAFPQPRNYKPSYAAG------DEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
        + + V     + K       PQ +N KP+ A        + +L RFTRNA LVA+GV +N+ +V  Y+KE+ DD L PYR+RPK
Subjt:  SQAHV-----HDKTEDSPAFPQPRNYKPSYAAG------DEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATCAGACGGAGGTCAAAATCCACCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCA
GAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGTA
GTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGT
TTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTA
TGCAGCTGGAGACGAGTACCTAAACAGGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCG
ACGATATTTTACACCCTTACCGAAGACGACCAAAATGA
mRNA sequenceShow/hide mRNA sequence
TTGTAGCCTAGTATTTGCTATTAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGTGTTCGTGTTCGTGTTCATAGCCAGAGAGAGTT
GTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCACCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTA
TTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTT
CAAAAGAGGGACGTAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTG
CCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAA
CTACAAACCATCCTATGCAGCTGGAGACGAGTACCTAAACAGGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAGTTTGCATCTACA
TAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTG
CAGAACGCCAACAACGCCCGATCATACATAACATTGATCAAATTCACGTCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAA
TAATGTAATGAATTTAAATTCTCATGATTGTTCAAGCCATTGATTTAAACCTCGAGATAGAAAATTTTGAATTACATGTTTGGTCCCCGAACTTATTAGAAATTGAAAGA
AAG
Protein sequenceShow/hide protein sequence
MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVG
LEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK