; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G008210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:4057080..4058161
RNA-Seq ExpressionCmoCh20G008210
SyntenyCmoCh20G008210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8093580.1 hypothetical protein EE612_020441 [Oryza sativa]3.6e-1932.09Show/hide
Query:  VHRKLILGFEPRPRQLSGEPIITEQYVGDALALCSRQPCCHERVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFRDSQVQVVAIGLGVGRFSYHD
        +HR+L+  FEP   QL+GE +I EQ+VGDA+AL + +P   ERV    VR++ + + GDE + ALD+ AHVLD ++   RD QVQVV + L V    +H 
Subjt:  VHRKLILGFEPRPRQLSGEPIITEQYVGDALALCSRQPCCHERVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFRDSQVQVVAIGLGVGRFSYHD

Query:  NGVREVVRLHVIRRRTYV----VYDLRVWIDAFLHRLEDGGSGCEIVAA-----ESFPFDRPTAALIFGAFFDRGRTGSSAFSPF----FNRTSDFLTAS
        +  R VV L  +  R  V    V D R  +   L RL+D      I  +     ES   +     +  G     G  G                +     
Subjt:  NGVREVVRLHVIRRRTYV----VYDLRVWIDAFLHRLEDGGSGCEIVAA-----ESFPFDRPTAALIFGAFFDRGRTGSSAFSPF----FNRTSDFLTAS

Query:  LAKSLSINLASKLIYKSVIGQWILKQPHYELDSQDPPYSVVDSVHRNSLAVDKVGKAIDELLVICRNH
        LA+ L + L ++L  ++ + + +L++ H ELD++D  + VVD V  +        +  DEL V+ R+H
Subjt:  LAKSLSINLASKLIYKSVIGQWILKQPHYELDSQDPPYSVVDSVHRNSLAVDKVGKAIDELLVICRNH

TrEMBL top hitse value%identityAlignment
A0A0A0LM31 Uncharacterized protein4.5e-0743.93Show/hide
Query:  VAAESFPFDRPTAALIFGAF-----FDRGRTGSSAFSPFFNRTSDFLTAS---LAKSLSINLASKLIYKSVIGQWILKQPHYELDSQDPPYS-VVDSVHR
        ++AES P D P AA  +  F          T    F   F  +S     S   L  +L  NLASKLIYKSV  QWILKQ H++LDSQ+P +  VVDS H+
Subjt:  VAAESFPFDRPTAALIFGAF-----FDRGRTGSSAFSPFFNRTSDFLTAS---LAKSLSINLASKLIYKSVIGQWILKQPHYELDSQDPPYS-VVDSVHR

Query:  NSLAVDK
        N++  DK
Subjt:  NSLAVDK

A0A0P0W314 Os03g0749200 protein1.8e-1932.09Show/hide
Query:  VHRKLILGFEPRPRQLSGEPIITEQYVGDALALCSRQPCCHERVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFRDSQVQVVAIGLGVGRFSYHD
        +HR+L+  FEP   QL+GE +I EQ+VGDA+AL + +P   ERV    VR++ + + GDE + ALD+ AHVLD ++   RD QVQVV + L V    +H 
Subjt:  VHRKLILGFEPRPRQLSGEPIITEQYVGDALALCSRQPCCHERVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFRDSQVQVVAIGLGVGRFSYHD

Query:  NGVREVVRLHVIRRRTYV----VYDLRVWIDAFLHRLEDGGSGCEIVAA-----ESFPFDRPTAALIFGAFFDRGRTGSSAFSPF----FNRTSDFLTAS
        +  R VV L  +  R  V    V D R  +   L RL+D      I  +     ES   +     +  G     G  G                +     
Subjt:  NGVREVVRLHVIRRRTYV----VYDLRVWIDAFLHRLEDGGSGCEIVAA-----ESFPFDRPTAALIFGAFFDRGRTGSSAFSPF----FNRTSDFLTAS

Query:  LAKSLSINLASKLIYKSVIGQWILKQPHYELDSQDPPYSVVDSVHRNSLAVDKVGKAIDELLVICRNH
        LA+ L + L ++L  ++ + + +L++ H ELD++D  + VVD V  +        +  DEL V+ R+H
Subjt:  LAKSLSINLASKLIYKSVIGQWILKQPHYELDSQDPPYSVVDSVHRNSLAVDKVGKAIDELLVICRNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCATCGGAAGTTGATCCTCGGTTTTGAACCACGTCCTCGCCAGCTTTCCGGTGAACCCATAATCACCGAACAGTACGTCGGCGACGCCCTCGCCCTCTGTTCCCG
GCAGCCATGCTGCCACGAGCGCGTCCAACTGCGACATGTACGGATGAATCGTCAGGGGTCGGCCGGAGACGAGGACAACGACGCACTTGACGACGTTGCACACGTGCTGG
ATCGTGTCCAAGCCTCCTTCCGGGATAGTCAGGTTCAAGTTGTCGCCATTGGTCTCGGCGTAGGGCGGTTCTCCTACCACGACAATGGCGTACGTGAAGTTGTTCGCCTT
CACGTAATCCGCCGTCGGACTTACGTCGTGTACGACCTCCGTGTTTGGATCGACGCTTTTCTTCACCGCCTCGAGGATGGTGGTTCCGGTTGTGAGATTGTCGCCGCTGA
GTCCTTTCCATTTGATCGTCCAACCGCCGCACTGATCTTCGGCGCCTTCTTCGACAGAGGAAGAACTGGATCATCTGCATTTTCGCCGTTCTTCAATAGAACAAGTGATT
TCCTCACTGCTTCTCTTGCCAAATCTCTGTCAATTAACCTGGCTTCCAAGCTCATTTACAAATCTGTCATCGGCCAATGGATTCTCAAACAGCCCCATTACGAACTTGAC
TCTCAAGATCCTCCTTACAGCGTCGTTGATTCGGTACATCGGAACAGCCTTGCTGTTGACAAGGTAGGTAAGGCCATCGATGAACTCCTTGTAATTTGTAGGAACCATGA
ACTGAAACACGACAGTAAAACTAGTTTTGTAAGATCTAAGATGCCATGTTCATTGAGATTGCCTATGTTGATAATCTTACCATGTCTATTCCTGCTTGAACTCCTGATAG
AATCGAGAATGTGTAATTTGAATGAGCTGGGTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCATCGGAAGTTGATCCTCGGTTTTGAACCACGTCCTCGCCAGCTTTCCGGTGAACCCATAATCACCGAACAGTACGTCGGCGACGCCCTCGCCCTCTGTTCCCG
GCAGCCATGCTGCCACGAGCGCGTCCAACTGCGACATGTACGGATGAATCGTCAGGGGTCGGCCGGAGACGAGGACAACGACGCACTTGACGACGTTGCACACGTGCTGG
ATCGTGTCCAAGCCTCCTTCCGGGATAGTCAGGTTCAAGTTGTCGCCATTGGTCTCGGCGTAGGGCGGTTCTCCTACCACGACAATGGCGTACGTGAAGTTGTTCGCCTT
CACGTAATCCGCCGTCGGACTTACGTCGTGTACGACCTCCGTGTTTGGATCGACGCTTTTCTTCACCGCCTCGAGGATGGTGGTTCCGGTTGTGAGATTGTCGCCGCTGA
GTCCTTTCCATTTGATCGTCCAACCGCCGCACTGATCTTCGGCGCCTTCTTCGACAGAGGAAGAACTGGATCATCTGCATTTTCGCCGTTCTTCAATAGAACAAGTGATT
TCCTCACTGCTTCTCTTGCCAAATCTCTGTCAATTAACCTGGCTTCCAAGCTCATTTACAAATCTGTCATCGGCCAATGGATTCTCAAACAGCCCCATTACGAACTTGAC
TCTCAAGATCCTCCTTACAGCGTCGTTGATTCGGTACATCGGAACAGCCTTGCTGTTGACAAGGTAGGTAAGGCCATCGATGAACTCCTTGTAATTTGTAGGAACCATGA
ACTGAAACACGACAGTAAAACTAGTTTTGTAAGATCTAAGATGCCATGTTCATTGAGATTGCCTATGTTGATAATCTTACCATGTCTATTCCTGCTTGAACTCCTGATAG
AATCGAGAATGTGTAATTTGAATGAGCTGGGTCTGTGATCCTATCAATACCTTCCCAATCAGAAATTACAAAACCCTGCAATAGTTTGTCCGTTC
Protein sequenceShow/hide protein sequence
MVHRKLILGFEPRPRQLSGEPIITEQYVGDALALCSRQPCCHERVQLRHVRMNRQGSAGDEDNDALDDVAHVLDRVQASFRDSQVQVVAIGLGVGRFSYHDNGVREVVRL
HVIRRRTYVVYDLRVWIDAFLHRLEDGGSGCEIVAAESFPFDRPTAALIFGAFFDRGRTGSSAFSPFFNRTSDFLTASLAKSLSINLASKLIYKSVIGQWILKQPHYELD
SQDPPYSVVDSVHRNSLAVDKVGKAIDELLVICRNHELKHDSKTSFVRSKMPCSLRLPMLIILPCLFLLELLIESRMCNLNELGL