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CmoCh20G008580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEncodes a protein of unknown function that is a marker for oxidative stress response.
Genome locationCmo_Chr20:4321729..4326955
RNA-Seq ExpressionCmoCh20G008580
SyntenyCmoCh20G008580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605077.1 Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3894.32Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQK+KPSAAANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD++SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
XP_022944752.1 uncharacterized protein LOC111449113 [Cucurbita moschata]8.2e-41100Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
XP_022986651.1 uncharacterized protein LOC111484328 [Cucurbita maxima]1.6e-3997.73Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        ME+QKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
XP_023006871.1 uncharacterized protein LOC111499535 [Cucurbita maxima]5.0e-3894.32Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQK+KPSAAANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD++SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
XP_023513344.1 uncharacterized protein LOC111777852 [Cucurbita pepo subsp. pepo]5.3e-4098.86Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
TrEMBL top hitse value%identityAlignment
A0A1S3CDL9 uncharacterized protein LOC1034996747.0e-3893.18Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQK+KPS AANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SET+GVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
A0A5A7TRS7 Uncharacterized protein7.0e-3893.18Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQK+KPS AANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SET+GVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
A0A6J1FYY5 uncharacterized protein LOC1114491134.0e-41100Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
A0A6J1J859 uncharacterized protein LOC1114843287.5e-4097.73Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        ME+QKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADR+SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
A0A6J1KX05 uncharacterized protein LOC1114995352.4e-3894.32Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
        MEQQK+KPSAAANPPIPSCRKKKNE+ TFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD++SETSGVESSLPLRTTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21640.1 Encodes a protein of unknown function that is a marker for oxidative stress response.1.6e-1348.84Show/hide
Query:  NPPIP-----SCRKK-KNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKM---FRMSKVVADRHSETSG-VESSLPLRTTVSE
        NPP P     SCRK+ K+++ TF  +LKDH+DEFIHASMDEHK+CFK T++K+   F  ++ VA++  E    VE   PL+T V++
Subjt:  NPPIP-----SCRKK-KNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKM---FRMSKVVADRHSETSG-VESSLPLRTTVSE
AT3G05570.1 unknown protein5.4e-2257.78Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETS--GVESSLPLRTTVSE
        ME QK +      P   SCRKK  +D  FLED+KDHID+FI+ASMD+HK+CF KTI KMF +SK VAD+    +  GVES LPL+TTVS+
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETS--GVESSLPLRTTVSE
AT4G39235.1 unknown protein2.2e-2361.8Show/hide
Query:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHS-ETSGVESSLPLRTTVSE
        ME Q ++   +  P + SCRKK  +D TF ED+KDHID+FIHASMDEHKSCF+KTI KMF +SK VA++ + E  GVES LPL+TTVSE
Subjt:  MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHS-ETSGVESSLPLRTTVSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAACAGAAAGATAAACCATCAGCTGCAGCAAACCCACCCATTCCTTCCTGTAGAAAGAAGAAAAATGAAGACGGTACATTCTTGGAGGATTTGAAGGATCACAT
CGATGAGTTCATTCATGCATCGATGGACGAACACAAATCGTGCTTCAAGAAAACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGCATTCAGAGACAA
GTGGAGTTGAAAGTTCTCTGCCTCTTCGAACAACAGTATCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ACAGAGCCACGACCAGGTCTCCCTTTTCGTTCCCTAAACCCAGTTTTTGTTCTTAAACCCTATCGTCTTCGTTGCTGCAATCGCCCTCCGGCACCCTCTCCCTGTCACAG
CCGCTCGGAATTCTTCTGCAACTGCTCGTTGGTCGCCAAACACACACATCGACGCTACAACTTTGGTGCCAGGTTAATACCAATGGAACAACAGAAAGATAAACCATCAG
CTGCAGCAAACCCACCCATTCCTTCCTGTAGAAAGAAGAAAAATGAAGACGGTACATTCTTGGAGGATTTGAAGGATCACATCGATGAGTTCATTCATGCATCGATGGAC
GAACACAAATCGTGCTTCAAGAAAACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGCATTCAGAGACAAGTGGAGTTGAAAGTTCTCTGCCTCTTCG
AACAACAGTATCAGAGTAAATTCTCTTTCTTCCTTTCTTCAAGGATACTTTGTCTGCATCTTCAACCAACTCCATGAAATCTTGGATTCCTATTTATAGTCTATTTTACA
TGATTCCACATGAAACGTTACCGTTTTGTCTCCCTTGATGTGCTATTAATTGGTGTTATATTTTGAGCCACCAACCAATACTGTTCTTGGAATTTTTCTTGCTTGTTTGG
TTACCTCTTGATGCTTAGAGTTTATCTAAAAGGACTTGATTTCTGTTTCCAGACTTAGGTCACGATTAATTTTTTAGATGATAACATATAACAGCCCAAGCCCACTGCTA
GCAGATATTGTCCTCTTTGGACTTTCCCTTTTGGGCTTCTATGGAGAGGTTTCCAC
Protein sequenceShow/hide protein sequence
MEQQKDKPSAAANPPIPSCRKKKNEDGTFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADRHSETSGVESSLPLRTTVSE