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CmoCh20G008740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:4420855..4421259
RNA-Seq ExpressionCmoCh20G008740
SyntenyCmoCh20G008740
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045945.1 uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa]3.3e-5788.81Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHS+ SLTNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPL K+ LPISLT LC+LAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALASSKKA+PS+KAAP AV YRI A GTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

KAG6571133.1 hypothetical protein SDJN03_30048, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6499.25Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSSPSLTN PFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

XP_022944054.1 uncharacterized protein LOC111448604 [Cucurbita moschata]3.9e-66100Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

XP_022986185.1 uncharacterized protein LOC111484003 [Cucurbita maxima]1.8e-6397.01Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSSPSLT W FTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVAL SSKKAYPSMKAAPAAV YRIRAPGTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

XP_023512236.1 uncharacterized protein LOC111777025 [Cucurbita pepo subsp. pepo]1.6e-6497.76Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALASSKKAYPSMKAAPAAV +RIRAPG SY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

TrEMBL top hitse value%identityAlignment
A0A0A0LIX5 Uncharacterized protein1.3e-5190.08Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHS+ SLTNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI SIVPQISSDRELELGEIYFLIPL KS LPISLT LC+LAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPA
        KANVALASSKKA+PS+KA  A
Subjt:  KANVALASSKKAYPSMKAAPA

A0A5D3CPA0 Uncharacterized protein1.6e-5788.81Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHS+ SLTNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPL K+ LPISLT LC+LAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALASSKKA+PS+KAAP AV YRI A GTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

A0A6J1D5R9 uncharacterized protein LOC1110171952.3e-5687.31Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSS SLTNWPFTAKIIH DG LQELRHPVKA HIL+QNP+CFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAKS LP+SLT LCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALA+SKKAYPS+KAAP AV +RI APG SY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

A0A6J1FVY0 uncharacterized protein LOC1114486041.9e-66100Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

A0A6J1JDD5 uncharacterized protein LOC1114840038.7e-6497.01Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MGVCASSQHSSPSLT W FTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY
        KANVAL SSKKAYPSMKAAPAAV YRIRAPGTSY
Subjt:  KANVALASSKKAYPSMKAAPAAVAYRIRAPGTSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein2.2e-1134.96Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHIL----------NQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPI
        MG+C S   +     +   TAKI+ I+G L+E   PV AS +L          + + + FLC+S+S+  +  +P I SD  L+  +IYF++P++K    +
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHIL----------NQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPI

Query:  SLTILCALAAKANVAL--ASSKK
        S + + ALA KA+VA+  A+ KK
Subjt:  SLTILCALAAKANVAL--ASSKK

AT2G23690.1 unknown protein2.3e-1638.53Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MG+C+S + +  +      TAK+I  DGR+ E   PVK  ++L +NP CF+C+S+ M  +++V  IS+D E +LG++YF +PL+     +    + ALA 
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASS
        KA+ AL  S
Subjt:  KANVALASS

AT3G50800.1 unknown protein3.1e-1339.45Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MG CAS +           TAK+I  DG LQE   PVK   IL +NP  F+C+S+ M  +  V  +    +L  GE+YF++PL   + P+    + ALA 
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASS
        KA+ ALA S
Subjt:  KANVALASS

AT4G37240.1 unknown protein1.8e-1641.51Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MG+C+SS+ +  +      TAK+I  DGR+ E  +PVK  ++L + P CF+C+S+ M  +  V  IS+D EL+LG+IYF +PL     P+    + ALA 
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVAL
        KA+ AL
Subjt:  KANVAL

AT5G66580.1 unknown protein1.4e-1337.61Show/hide
Query:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA
        MG CAS +           +AK+I +DG LQE   PVK   IL +NP  F+C+S+ M  +  V  ++ + EL  G++YF++PL   + P+    + ALA 
Subjt:  MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAA

Query:  KANVALASS
        KA+ AL  S
Subjt:  KANVALASS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTGTGCCTCATCTCAGCACTCAAGCCCTAGCCTCACGAACTGGCCCTTCACAGCGAAAATCATTCATATAGATGGCAGGCTACAAGAATTGAGGCACCCAGT
CAAGGCCAGCCACATTCTCAATCAAAACCCTAACTGTTTCCTCTGTAGTTCAGAATCTATGAAGATCAATTCAATCGTTCCACAAATTTCCAGCGACAGAGAGCTCGAAT
TGGGGGAAATTTACTTTCTAATCCCGCTTGCTAAATCCGATCTGCCGATCTCTCTCACAATCTTGTGTGCTTTGGCTGCCAAAGCAAATGTAGCCCTCGCCAGCTCCAAG
AAGGCATATCCGTCCATGAAAGCGGCGCCGGCAGCCGTAGCGTACCGCATCAGAGCACCAGGAACGTCGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTTGTGCCTCATCTCAGCACTCAAGCCCTAGCCTCACGAACTGGCCCTTCACAGCGAAAATCATTCATATAGATGGCAGGCTACAAGAATTGAGGCACCCAGT
CAAGGCCAGCCACATTCTCAATCAAAACCCTAACTGTTTCCTCTGTAGTTCAGAATCTATGAAGATCAATTCAATCGTTCCACAAATTTCCAGCGACAGAGAGCTCGAAT
TGGGGGAAATTTACTTTCTAATCCCGCTTGCTAAATCCGATCTGCCGATCTCTCTCACAATCTTGTGTGCTTTGGCTGCCAAAGCAAATGTAGCCCTCGCCAGCTCCAAG
AAGGCATATCCGTCCATGAAAGCGGCGCCGGCAGCCGTAGCGTACCGCATCAGAGCACCAGGAACGTCGTACTGA
Protein sequenceShow/hide protein sequence
MGVCASSQHSSPSLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAAKANVALASSK
KAYPSMKAAPAAVAYRIRAPGTSY