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CmoCh20G008970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G008970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:4548957..4550271
RNA-Seq ExpressionCmoCh20G008970
SyntenyCmoCh20G008970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI32450.3 unnamed protein product, partial [Vitis vinifera]1.0e-3452.53Show/hide
Query:  DRTPINGATHIGERSQLLESLSGLNQTPATYRNLNKLSIKLGGQKTGDHIGDFGNKIGFERETSSDGFSGEAVAEAREDHSDGVIGWEREIGESNMGLEL
        D T ++GA H+GE  +L + L G  +T AT  N ++  +K GG++  DH+GD G+++GFER    +GF GEAV EAREDH DGV+  ERE+GE ++G EL
Subjt:  DRTPINGATHIGERSQLLESLSGLNQTPATYRNLNKLSIKLGGQKTGDHIGDFGNKIGFERETSSDGFSGEAVAEAREDHSDGVIGWEREIGESNMGLEL

Query:  VDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGRG
        VDDGGE+ + EAVE +PLG+++RGF GP+V+GGE  EGGDGV+G R     GG  G G
Subjt:  VDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGRG

KAF5448691.1 hypothetical protein F2P56_029198 [Juglans regia]5.2e-2359.88Show/hide
Query:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSG--GGSGRG-GGGVGARGGDE
        + E+ EDH D +IG +REIGES++GLELV+DGGEDRV E VEG PLG+A+RG EGP+V  GE A+G DG IGGRG    G  G   RG  GG GARGG E
Subjt:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSG--GGSGRG-GGGVGARGGDE

Query:  GEDGGDCEEEERGG-GGGGKKGGGRVEGGGGRRGGGGGSG-------REKGNGGIEVVVEVE
        GEDG D EEEERGG GGGG++ G    GGGG RG GGG G        E+G+GG+E ++EVE
Subjt:  GEDGGDCEEEERGG-GGGGKKGGGRVEGGGGRRGGGGGSG-------REKGNGGIEVVVEVE

KAF7840862.1 pentatricopeptide repeat-containing protein [Senna tora]1.0e-3143.32Show/hide
Query:  HQPAPASHFHHNNTETFQCQECWVQGQSHLGPSMVQALAPWQFDTNYATHNKQQWRADAIRRKWCQQERQQRISPITHNVRSNMVTPNVNYVIPNNITRS
        HQP  AS F   N          V+   H  PS   AL P Q DTNYA H+KQQWRA AI RK CQQ+ QQ I+P+++NVR+N V+P+++ ++P+++   
Subjt:  HQPAPASHFHHNNTETFQCQECWVQGQSHLGPSMVQALAPWQFDTNYATHNKQQWRADAIRRKWCQQERQQRISPITHNVRSNMVTPNVNYVIPNNITRS

Query:  KPMVHKTIPKMAGIVTTTRSFNTHIPENFLVVRNNLKQNRGIP--------------KSTILDRTPINGATHIGERSQLLESLSGLN
        +P+V KTIP+M GIV TTR  +TH+PE+ LV+ +NLK+NR IP              K+  L    +N +TH+ +RS+L + L   N
Subjt:  KPMVHKTIPKMAGIVTTTRSFNTHIPENFLVVRNNLKQNRGIP--------------KSTILDRTPINGATHIGERSQLLESLSGLN

PON35851.1 hypothetical protein PanWU01x14_332970 [Parasponia andersonii]5.0e-2665.75Show/hide
Query:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG
        + E  +DH DGVIG EREIGES++GL+L+DDGGEDRV EAV GAPLG+ +R  EGP+V+GGEG+EGGDGV+GGRG  G GGG GR      GGGG G  G
Subjt:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG

Query:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG
        GD GEDGGD EEEERGGGG G++ G    GGGG RGGGGG G   G
Subjt:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG

POO03082.1 hypothetical protein TorRG33x02_011430 [Trema orientale]5.0e-2665.75Show/hide
Query:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG
        + E  +DH DGVIG EREIGES++GL+L+DDGGEDRV EAV GAPLG+ +RG EGP+V+GGEG+EGGDGV+GGRG  G GGG GR      GGGG G  G
Subjt:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG

Query:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG
        GD GEDGGD EEEERG GG G++ G    GGGG RGGGGG G   G
Subjt:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG

TrEMBL top hitse value%identityAlignment
A0A2P5AH47 Uncharacterized protein2.4e-2665.75Show/hide
Query:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG
        + E  +DH DGVIG EREIGES++GL+L+DDGGEDRV EAV GAPLG+ +R  EGP+V+GGEG+EGGDGV+GGRG  G GGG GR      GGGG G  G
Subjt:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG

Query:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG
        GD GEDGGD EEEERGGGG G++ G    GGGG RGGGGG G   G
Subjt:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG

A0A2P5FZ69 Uncharacterized protein2.4e-2665.75Show/hide
Query:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG
        + E  +DH DGVIG EREIGES++GL+L+DDGGEDRV EAV GAPLG+ +RG EGP+V+GGEG+EGGDGV+GGRG  G GGG GR      GGGG G  G
Subjt:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGR------GGGGVGARG

Query:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG
        GD GEDGGD EEEERG GG G++ G    GGGG RGGGGG G   G
Subjt:  GDEGEDGGDCEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKG

A0A5D3CNV7 Uncharacterized protein3.1e-2170.8Show/hide
Query:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGRGGGGVGARGGDEGED
        +AEAREDHS+GVI  EREIGE NMG ELVDDGGEDRV E VEGAPLGIAKRGFEGPNVVGGEGAEGGDGV+GG GR GSG GS  GG   G R   E   
Subjt:  VAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGRGGGGVGARGGDEGED

Query:  GGDCEEEERGGGG
        GG   ++   G G
Subjt:  GGDCEEEERGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTTTGATGCAAATCATCAGCCAGCGCCTGCCTCACACTTTCACCATAATAACACAGAGACTTTTCAGTGTCAAGAATGTTGGGTGCAGGGCCAGTCTCATTT
GGGTCCTTCAATGGTTCAGGCTCTGGCTCCTTGGCAATTTGACACAAATTATGCAACACACAACAAGCAACAATGGCGTGCCGATGCCATTCGGCGAAAATGGTGTCAAC
AGGAAAGACAACAGAGGATATCCCCAATCACCCACAATGTAAGGTCGAACATGGTGACCCCTAACGTTAATTACGTTATCCCAAACAACATCACCAGAAGTAAGCCTATG
GTACATAAGACTATCCCTAAAATGGCTGGCATCGTCACTACCACCAGGAGCTTTAACACACACATCCCAGAAAATTTTCTTGTTGTCCGCAACAACTTGAAGCAGAACCG
AGGGATACCCAAATCGACAATTCTTGATCGGACTCCCATCAATGGCGCCACACATATTGGGGAGAGAAGTCAACTCCTCGAAAGCCTGAGTGGTCTCAATCAAACGCCGG
CGACTTACCGGAATCTTAATAAACTCAGCATAAAGCTTGGTGGCCAAAAGACGGGTGACCATATTGGTGATTTTGGAAACAAGATAGGGTTCGAGAGAGAAACGAGCAGC
GACGGTTTTAGCGGAGAGGCCGTGGCAGAGGCGAGAGAGGACCATAGCGACGGCGTAATCGGATGGGAGAGAGAGATTGGAGAGAGCAATATGGGGCTTGAGCTTGTCGA
CGATGGTGGTGAAGACAGGGTGAGAGAGGCCGTAGAGGGAGCGCCATTGGGCATCGCGAAAAGGGGCTTCGAGGGACCAAATGTGGTCGGTGGAGAAGGCGCGGAAGGCG
GAGACGGAGTAATCGGAGGAAGAGGGAGGAAGGGTAGTGGAGGAGGTTCGGGAAGGGGAGGAGGAGGCGTTGGAGCGAGAGGAGGCGATGAAGGAGAGGACGGAGGCGAT
TGTGAAGAAGAGGAGAGGGGCGGCGGAGGAGGAGGAAAGAAGGGAGGTGGGAGAGTTGAAGGAGGCGGAGGAAGGAGAGGAGGCGGAGGAGGGAGTGGAAGGGAGAAGGG
TAATGGTGGGATCGAGGTAGTTGTGGAGGTGGAGGAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCTTTGATGCAAATCATCAGCCAGCGCCTGCCTCACACTTTCACCATAATAACACAGAGACTTTTCAGTGTCAAGAATGTTGGGTGCAGGGCCAGTCTCATTT
GGGTCCTTCAATGGTTCAGGCTCTGGCTCCTTGGCAATTTGACACAAATTATGCAACACACAACAAGCAACAATGGCGTGCCGATGCCATTCGGCGAAAATGGTGTCAAC
AGGAAAGACAACAGAGGATATCCCCAATCACCCACAATGTAAGGTCGAACATGGTGACCCCTAACGTTAATTACGTTATCCCAAACAACATCACCAGAAGTAAGCCTATG
GTACATAAGACTATCCCTAAAATGGCTGGCATCGTCACTACCACCAGGAGCTTTAACACACACATCCCAGAAAATTTTCTTGTTGTCCGCAACAACTTGAAGCAGAACCG
AGGGATACCCAAATCGACAATTCTTGATCGGACTCCCATCAATGGCGCCACACATATTGGGGAGAGAAGTCAACTCCTCGAAAGCCTGAGTGGTCTCAATCAAACGCCGG
CGACTTACCGGAATCTTAATAAACTCAGCATAAAGCTTGGTGGCCAAAAGACGGGTGACCATATTGGTGATTTTGGAAACAAGATAGGGTTCGAGAGAGAAACGAGCAGC
GACGGTTTTAGCGGAGAGGCCGTGGCAGAGGCGAGAGAGGACCATAGCGACGGCGTAATCGGATGGGAGAGAGAGATTGGAGAGAGCAATATGGGGCTTGAGCTTGTCGA
CGATGGTGGTGAAGACAGGGTGAGAGAGGCCGTAGAGGGAGCGCCATTGGGCATCGCGAAAAGGGGCTTCGAGGGACCAAATGTGGTCGGTGGAGAAGGCGCGGAAGGCG
GAGACGGAGTAATCGGAGGAAGAGGGAGGAAGGGTAGTGGAGGAGGTTCGGGAAGGGGAGGAGGAGGCGTTGGAGCGAGAGGAGGCGATGAAGGAGAGGACGGAGGCGAT
TGTGAAGAAGAGGAGAGGGGCGGCGGAGGAGGAGGAAAGAAGGGAGGTGGGAGAGTTGAAGGAGGCGGAGGAAGGAGAGGAGGCGGAGGAGGGAGTGGAAGGGAGAAGGG
TAATGGTGGGATCGAGGTAGTTGTGGAGGTGGAGGAGAGTTGA
Protein sequenceShow/hide protein sequence
MEAFDANHQPAPASHFHHNNTETFQCQECWVQGQSHLGPSMVQALAPWQFDTNYATHNKQQWRADAIRRKWCQQERQQRISPITHNVRSNMVTPNVNYVIPNNITRSKPM
VHKTIPKMAGIVTTTRSFNTHIPENFLVVRNNLKQNRGIPKSTILDRTPINGATHIGERSQLLESLSGLNQTPATYRNLNKLSIKLGGQKTGDHIGDFGNKIGFERETSS
DGFSGEAVAEAREDHSDGVIGWEREIGESNMGLELVDDGGEDRVREAVEGAPLGIAKRGFEGPNVVGGEGAEGGDGVIGGRGRKGSGGGSGRGGGGVGARGGDEGEDGGD
CEEEERGGGGGGKKGGGRVEGGGGRRGGGGGSGREKGNGGIEVVVEVEES