; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G009060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G009060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationCmo_Chr20:4618462..4622589
RNA-Seq ExpressionCmoCh20G009060
SyntenyCmoCh20G009060
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571164.1 hypothetical protein SDJN03_30079, partial [Cucurbita argyrosperma subsp. sororia]9.1e-7690.17Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-7589.6Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRT+HKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTP+VPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

XP_022944447.1 uncharacterized protein LOC111448897 [Cucurbita moschata]4.1e-7690.75Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

XP_022986629.1 uncharacterized protein LOC111484314 [Cucurbita maxima]5.0e-7488.44Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAAC APSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSR++HKLSVRAEYNDGGR+GGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]1.0e-7489.02Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKSISFGQ PKLAIQRKCSRT+HKLSVRAEYNDGGR+GGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983955.8e-6881.03Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPV-EADPEIEATM
        QIRRSILNEDE+GFRRA+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPV EA+PEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPV-EADPEIEATM

A0A5D3CQ66 Uncharacterized protein5.8e-6881.03Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPV-EADPEIEATM
        QIRRSILNEDE+GFRRA+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPV EA+PEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPV-EADPEIEATM

A0A6J1D647 uncharacterized protein LOC1110172731.3e-6782.66Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC RT+ KLSVRAEYND GR GGG+FVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KIGQLNSAIDNVSSRLRGGN TPAVPVEADPE EATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488972.0e-7690.75Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

A0A6J1JGK4 uncharacterized protein LOC1114843142.4e-7488.44Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI
        MAAC APSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSR++HKLSVRAEYNDGGR+GGGEFVAGFLLGGAVFGTLAYIFAP                
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVI

Query:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
        QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM
Subjt:  QIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.4.7e-1437.09Show/hide
Query:  SISFGQAPKLAIQRKCSRTSHKLSVRAEY-NDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVIQIRRSILNEDEYGFRRARRPIYY
        S+SFG      +     RT   L++++ Y +D G    G FV GF+LGG + G L  ++AP                QI ++I   D     R      Y
Subjt:  SISFGQAPKLAIQRKCSRTSHKLSVRAEY-NDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVIQIRRSILNEDEYGFRRARRPIYY

Query:  DD--GLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEAT
        D+   LEKTR+ L EKI QLNSAID+VSS+L+    TP     +  EIEAT
Subjt:  DD--GLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEAT

AT3G02900.1 unknown protein1.9e-3450Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHV
        MA+  A  +S SG     +  +  +I   ++  L +Q K +R SHKLSV A Y  G + GG  +FV GFLLG AVFGTLAYIFAP               
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHV

Query:  IQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGG-------NKTPAVPVEADPEIEAT
         QIRRS+L+E+EYGF++  +P+YYD+GLE+ R+ LNEKIGQLNSAID VSSRL+GG         +P+VPVE D E EAT
Subjt:  IQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGG-------NKTPAVPVEADPEIEAT

AT3G02900.2 unknown protein6.4e-3556.46Show/hide
Query:  LAIQRKCSRTSHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVIQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQ
        L +Q K +R SHKLSV A Y  G + GG  +FV GFLLG AVFGTLAYIFAP                QIRRS+L+E+EYGF++  +P+YYD+GLE+ R+
Subjt:  LAIQRKCSRTSHKLSVRAEYNDGGRNGG-GEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVIQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQ

Query:  TLNEKIGQLNSAIDNVSSRLRGG-------NKTPAVPVEADPEIEAT
         LNEKIGQLNSAID VSSRL+GG         +P+VPVE D E EAT
Subjt:  TLNEKIGQLNSAIDNVSSRLRGG-------NKTPAVPVEADPEIEAT

AT5G16660.1 unknown protein1.9e-3955.98Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQVRISVYC
        MA+C A + LS+SG      +KA+ LS  +K  S  +   L I +K +RT  K SV A Y DG R+G  G+F+AGFLLGGAVFG +AYIFAP        
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQVRISVYC

Query:  LSDCMHVIQIRRSILN-EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPA---VPVEADPEIEAT
                QIRRS+LN EDEYGF + ++P YYD+GLEKTR+TLNEKIGQLNSAIDNVSSRLRG  K  +   VPVE DPE+EAT
Subjt:  LSDCMHVIQIRRSILN-EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPA---VPVEADPEIEAT

AT5G16660.2 unknown protein3.1e-3755.43Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQVRISVYC
        MA+C A + LS+SG      +KA+ LS  +K  S  +   L I +K +RT  K SV A   DG R+G  G+F+AGFLLGGAVFG +AYIFAP        
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG-GGEFVAGFLLGGAVFGTLAYIFAPQVRISVYC

Query:  LSDCMHVIQIRRSILN-EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPA---VPVEADPEIEAT
                QIRRS+LN EDEYGF + ++P YYD+GLEKTR+TLNEKIGQLNSAIDNVSSRLRG  K  +   VPVE DPE+EAT
Subjt:  LSDCMHVIQIRRSILN-EDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPA---VPVEADPEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTGCTTTGCTCCGTCGCTCTCTGTATCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCA
GAGGAAGTGCTCGAGAACCAGCCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACTTTAGCTTACATTTTTGCTCCGCAGGTTCGAATATCTGTTTACTGCCTTTCTGATTGTATGCACGTAATACAGATCAGGAGATCTATACTAAATGAAGAC
GAGTATGGTTTTAGGAGGGCTAGACGTCCAATCTACTATGACGACGGTCTAGAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAA
TGTATCTTCACGTCTGAGAGGTGGCAACAAGACTCCAGCTGTGCCAGTTGAAGCGGATCCGGAGATAGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
AAGGTAGCTATCTTAAACACTCTCGCTTGTTAGTTGTTTCTCATTCTCCAATTTCGTTGATTTCTCATCTTCATCTCTGCTCTCTTTCCATATGGCCGCCTGCTTTGCTC
CGTCGCTCTCTGTATCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGTCAAGCACCAAAACTCGCCATCCAGAGGAAGTGCTCGAGAACC
AGCCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAATGGAGGTGGGGAGTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACTTTAGCTTA
CATTTTTGCTCCGCAGGTTCGAATATCTGTTTACTGCCTTTCTGATTGTATGCACGTAATACAGATCAGGAGATCTATACTAAATGAAGACGAGTATGGTTTTAGGAGGG
CTAGACGTCCAATCTACTATGACGACGGTCTAGAGAAAACCAGACAGACGTTGAATGAAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGA
GGTGGCAACAAGACTCCAGCTGTGCCAGTTGAAGCGGATCCGGAGATAGAAGCTACCATGTAAACACAGTTTCTAGTTGCACAGGTTTGAAGTTTCTACTTCTTAGATAC
CATATATCCATGTGACAATATGCCACAATTTTTAATTGAAAGAATTTGGTATTGATCCAAGTTAAAATGGATCGTTATAGTTTTTTGGATAAGTTCCCGATCATACCTGG
GTTGAGTTGAGTTCGAGTAATCTTTTGGATAAGTTTAAAATTTTCAGTTACTTAGGTTGATGGTTCGAATAACCCGAA
Protein sequenceShow/hide protein sequence
MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGAVFGTLAYIFAPQVRISVYCLSDCMHVIQIRRSILNED
EYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM