; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G009310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G009310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationCmo_Chr20:4822403..4825087
RNA-Seq ExpressionCmoCh20G009310
SyntenyCmoCh20G009310
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571186.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-12898.85Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
        GAETA   GTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

KAG7010993.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-12597.34Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATEN
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN

Query:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETA   GT GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

XP_022943431.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]3.3e-13099.62Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATEN
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN

Query:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

XP_022943432.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]1.4e-131100Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
        GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

XP_023512142.1 binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo]1.5e-12596.95Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
        GAETA      GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LTSTAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein3.9e-10083.27Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPA--ASAPATE
        MA RTVRVTNVSL ATEK+LR+FFSFSGEIEFVEMR DNE+ Q+AFVTFKD KGAETSILLSGATIVDQP+SI SAPDYNLPAV AS P A   S PA +
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPA--ASAPATE

Query:  NTGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSE
        NT         T+ T  T GSAMQKAEDVVSSMLAKGF LGKDALN+AKSFDERH+LTSTAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSE
Subjt:  NTGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSE

Query:  KTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKH
        KTKAAV+NAGSAIMTNRYV TGASWVSQTFQRVAKAAVDVSQKTKEK+LAE+ QGKH
Subjt:  KTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKH

A0A6J1FRP4 binding partner of ACD11 1-like isoform X11.6e-13099.62Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATEN
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN

Query:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

A0A6J1FT10 binding partner of ACD11 1-like isoform X26.6e-132100Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
        GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

A0A6J1J7Z5 binding partner of ACD11 1-like isoform X11.9e-12396.2Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP A EN
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATEN

Query:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETA    T GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

A0A6J1JGG3 binding partner of ACD11 1-like isoform X27.8e-12596.56Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPA ENT
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
        GAETA    T GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  KAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

SwissProt top hitse value%identityAlignment
P87216 Protein vip13.1e-0624.79Show/hide
Query:  VRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETA
        V VTN+S   TEK + +FFSF G++  +   K  E  Q A + F+ P   +T++LL  A +    I I S                           E  
Subjt:  VRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETA

Query:  GTTGTTGTTGTTGSAMQKAED-----VVSSMLAKGFILGKDALNRAKSFDERHRLTST-ASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        G   TT   G  G    + ED     ++S +L++G+ L    L ++   D+ + ++S    +  ++L     ++E+       V EK  E+D KF +S+K
Subjt:  GTTGTTGTTGTTGSAMQKAED-----VVSSMLAKGFILGKDALNRAKSFDERHRLTST-ASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVD
            +N   S + T  + +   +  +   Q+V  A  D
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVD

Q9LFD5 Binding partner of ACD11 12.5e-5952.36Show/hide
Query:  MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGA
        +R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+        PPAA    T+++GA
Subjt:  MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGA

Query:  ETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        E               S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+
Subjt:  ETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
                V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-6555.17Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        M M TV+V+NVSLGAT+++L+EFFSFSG+I ++E + + E+ ++A+VTFKD +GAET++LLSGATIVD  + +  APDY L     S    AS    ++ 
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
         +  AG            S ++KAEDVVSSMLAKGFILGKDA+ +AKS DE+H+LTSTAS KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAA-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGK
        K+A       V+NAGSAIM NRYV TGA+WV+  F +VAKAA +V QK KEK+   +++ K
Subjt:  KAA-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGK

AT5G16840.1 binding partner of acd11 11.7e-6052.36Show/hide
Query:  MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGA
        +R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+        PPAA    T+++GA
Subjt:  MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGA

Query:  ETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        E               S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+
Subjt:  ETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
                V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

AT5G16840.2 binding partner of acd11 11.6e-6153.15Show/hide
Query:  MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGA
        +R+V+V N+S GATE +++EFFSFSGE+E ++++  NE    A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+        PPAA    T+++GA
Subjt:  MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGA

Query:  ETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        E               S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+
Subjt:  ETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
                V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

AT5G16840.3 binding partner of acd11 11.6e-6152.73Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        MA+R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+        PPAA    T+++
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
        GAE               S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+T
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KA-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
        K+        V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  KA-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.4e-6352.69Show/hide
Query:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT
        M+M TV+V+NVSL ATE++L+EFFSFSG+I ++E + +N+  ++A+VTFKD +GAET++LL+G+TIVD  +++  +PDY LP  A      AS  + + +
Subjt:  MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENT

Query:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT
           ++ T           S  +KAEDVVS M++KGF+LGKDA+ +AKS DE+H+LTSTAS +V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKT
Subjt:  GAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKT

Query:  KAA-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKM-LAEDQQ
        K+A       V+NAGSAIM NRYV TGA+WV+  F RV+KAA +V QK KEK+ LAE+++
Subjt:  KAA-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKM-LAEDQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGAAAAATTTGAGAGAATTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAA
GGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAACCTATAAGCATTG
TTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGCAGCGTCCGCTCCAGCTACAGAGAACACAGGCGCTGAAACTGCTGGAACTACTGGAACT
ACTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTTAGCAGCATGCTGGCCAAAGGGTTCATTTTGGGCAAAGATGCGCTCAATAGGGCGAA
GTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGCGTTGGCACGACAGTGGTGA
ATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAAGGCGGCAGTGAACAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTCGACCGGG
GCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGATGTTAGCTGAGGATCAACAAGGGAAACATGGGAC
TCCAAATGTGAAGCCGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAGTAAAAAAAGAAAAAAAAAAAAGAAAAATAGAATGAGTCGGTTTCTAAACAACCGCCAAGCCACAACACACCTCTCACGCCCATTCTATCTTCTTCTTCTT
CTTCTCTCTCTAAGAACTTGGATTGGGAAACCCCTCGGGTGGATCACACAGAAGAATCATGGCGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGA
AAAATTTGAGAGAATTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGG
GCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAACCTATAAGCATTGTTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGC
AGCGTCCGCTCCAGCTACAGAGAACACAGGCGCTGAAACTGCTGGAACTACTGGAACTACTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTG
TTAGCAGCATGCTGGCCAAAGGGTTCATTTTGGGCAAAGATGCGCTCAATAGGGCGAAGTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCT
TCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAA
GGCGGCAGTGAACAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTCGACCGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATG
TTAGCCAGAAAACGAAGGAGAAGATGTTAGCTGAGGATCAACAAGGGAAACATGGGACTCCAAATGTGAAGCCGTGAGCATCCCAATGTTTGGCCAAAACAATGTGAGGA
CCAATTCTTAGCTTGCTCTACTTTCATCTCAGTTGTCTGTCTGATATACTTTTAATGCTCTATTTTAGTTTAGTATTAGGGAGTGCGTACACACAAATAAGCTTACATTA
CATGCTTATGTTGTAATTCAACCATATGAAAACCATTTATGCTATGTGATAAAGAATCCATGAATGAAAAAAAAAGAGCTATTTTTTTGTTTCTATTGTA
Protein sequenceShow/hide protein sequence
MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGT
TGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTG
ASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP