| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 0.0e+00 | 57.78 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
M SIVQLLASEKLNGDNY+ WKSNLNTILV+DDL+FVLTEECP P N NRTVR+AYDRW+KANDKARVYILAS++DVLAKKHD
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
Query: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
+ E N IDE +QVSFI+ SLPKSF F+TN +NKIE+NLT LLNELQ +Q+L +KG
Subjt: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAISK-KLLRGSSSKNKFGPSTSESVLMKKKGKGKNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------
+ EANVA++K K +RGSSSKNK GPS ++ MKKKGKG K P K K + ADKGKCF+CN++GHWKRNCPKYLAEKKAEK
Subjt: QTGEANVAISK-KLLRGSSSKNKFGPSTSESVLMKKKGKGKNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------------------------TQQG
T +G
Subjt: ------------------------------------------------------------------------------------------------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
RAK LELVH+DLCGPMNVKARGGYEYFISFIDD+SRY ++YL+HHKSE+ EKF+EYK EVEN +GKTIKTLRSDRGGEYMD +FQDY+IE GI+SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
AP PQQNGVSERRNRTLLDMVRSMMS+AQLPD FWGYA+ETA +ILN VP+KSV ETPYELWKGRK
Subjt: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
GYPKE++GGLFY PQEN+VFVSTNATFLEEDH RNHQPRSK+VL E+ K ATDK + ST+VVD + S QSH SQELR+PRRSGRV+ QP+RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
L L ETQ+IIPDDGVEDPLTYK AMND DRDQWIKAMNLEMESMYFNSVW LVD P VKPIGCKWIYKRKRDQ GKVQTFKARLVAKGYTQ EGVDYEE
Subjt: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
Query: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
TFSPVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNL+ESIYM + EGFI QD EQ+VCKL++SIYGLKQASRSWNI+FDTAIKSYGF+QNVDEPCVY
Subjt: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
K+IVNS VAFL+LYVDDILLIGNDV +TD+K WL TQFQMKDLGEAQ++LGIQIVRNRKNK LA+SQASYIDK+
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
Query: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
YQSNPGR HWTAVKNILKYLRRTR+YML+YGAKDLIL YTDSDFQ+D D+RKSTS
Subjt: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRS+KQ CIADSTMEAEYVAACEAAKE+VWLRKFLTDLEVVPNMHLP+TLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQ
V+VTQ
Subjt: VIVTQ
|
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| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 64.2 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKH----------DVMEE
++++ + +LA++KLNG+NY +WK+ +N +L+IDDL+FVL E+CP P +N RTVR+ Y+RW KAN+KAR YILAS+S+VLAKKH D ++E
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKH----------DVMEE
Query: --------------------------------------------NEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
NEAVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: --------------------------------------------NEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK---------TQQG
Q GEANVA S +K RGS+S K PS+S + KKK G+G K + + K KA KG CF CN+ GHWKRNCPKYLA+KK K T +G
Subjt: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK---------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRY Y+YLM HKSEALEKF+EYK EVEN L KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
AP PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW G K
Subjt: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
GYPK T+GG FYDP++N+VFVSTNATFLEEDHIR H+PRSK+VL+E+SKE T+ +TRVV++ RVV V +S ++H Q LR PRRSGRV P RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
+ L ET +I D +EDPLT+K AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVDYEE
Subjt: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
Query: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
TFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNL+E+IYM + EGFI EQ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVY
Subjt: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
KRI+N +VAFLVLYVDDILLIGND+G++TDIK WLATQFQMKDLGEAQFVLGIQI R+RKNK+LALSQASYIDKI
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
Query: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
YQSNPG AHWTAVK ILKYLRRTRDY L+YG+KDLIL YTDSDFQTD DSRKSTS
Subjt: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
VIVTQIAS HN+ DPFTK LT KVFEGHL SLGLR M
Subjt: VIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 55 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP P +N RTVR+ Y+RW KAN+KAR YILAS+S+VLAKKH+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
Query: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
V E N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S K PS+S + KKK G+G K + + K KA KG CF+CN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRY Y+YLM HKSEALEKF+EYK EVEN L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW GRK
Subjt: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDHIR H+PRSK+VL+E+SKE T+ +TRVV++ TRVV V +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
RY+ L ET +I D +EDPLT+K AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVD
Subjt: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
Query: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
YEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNL+E+IYM + EGFI EQ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEP
Subjt: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
CVYKRI+N +VAFLVLYVDDILLIGND+G++TDIK WLATQFQMKDLGEAQFVLGIQI R+RKNK+LALSQASYIDKI
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
Query: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
YQSNPG AHWTAVK ILKYLRRTRDY L+YG+KDLIL YTDSDFQTD DSRK
Subjt: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ DPFTK LT KVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 55 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP P +N RTVR+ Y+RW KAN+KAR YILAS+S+VLAKKH+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
Query: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
V E N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S K PS+S + KKK G+G K + + K KA KG CF+CN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRY Y+YLM HKSEALEKF+EYK EVEN L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW GRK
Subjt: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDHIR H+PRSK+VL+E+SKE T+ +TRVV++ TRVV V +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
RY+ L ET +I D +EDPLT+K AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVD
Subjt: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
Query: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
YEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNL+E+IYM + EGFI EQ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEP
Subjt: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
CVYKRI+N +VAFLVLYVDDILLIGND+G++TDIK WLATQFQMKDLGEAQFVLGIQI R+RKNK+LALSQASYIDKI
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
Query: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
YQSNPG AHWTAVK ILKYLRRTRDY L+YG+KDLIL YTDSDFQTD DSRK
Subjt: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ DPFTK LT KVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 63.49 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMEENEAVIDEKSQ
M++SI+ LL ++L G+NY TWKS LN ILVI DL FVL EECPP P + +++VRDAYDRW KANDKAR++ILAS+SD+L+KKH++M ++D
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMEENEAVIDEKSQ
Query: VSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGQTGEANVAISKKLLRGSSSKNKFGPSTSESVLMKKKGKGKN-KIPTNRKNKVQK
SL + F Q +Q Q EANVA SK+ S PS SE + +K+GKGK I K K +
Subjt: VSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGQTGEANVAISKKLLRGSSSKNKFGPSTSESVLMKKKGKGKN-KIPTNRKNKVQK
Query: ADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------------------------------------------------------------
A K KCF+CN + HWK NCPKYL +KK ++
Subjt: ADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------------------------------------------------------------
Query: ---------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEY
T +GYRAKE LEL+H+DLCGPMNVKARGG+EYFISFIDDYSRY YLYLM HKSEALEKF+EYKTEVENLL K IK LRSDRGGEY
Subjt: ---------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEY
Query: MDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK--------------
MDLRFQDYMIEHGI+SQLSAPG PQQNGVSERRNRTLLDMVRSMMS+AQLP FWGYAVETA +ILN VP+KSVSETP+ELW+GRK
Subjt: MDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK--------------
Query: -------------------GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPS
GYPKET+GGLF+DPQENRVFVSTNATFLEEDH+RNH+PRSKLVLS EATD++TRVVD+ GPS+R VD TSGQSHPS
Subjt: -------------------GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPS
Query: QELRMPRRSGRVITQPDRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTF
Q LRMPRRSGRV++QP+RYL L ETQV+IPDDGVEDPL+YK AMND D+DQW+KAM+LEMESMYFNSVWELVD P+GVKPIGCKWIYKRKRD GKVQTF
Subjt: QELRMPRRSGRVITQPDRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTF
Query: KARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKF
KARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNL+ESI+M++ EGFI Q EQ+VCKL RSIYGLKQASRSWNI+F
Subjt: KARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKF
Query: DTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI------
DTAIKSYGF QNVDEPCVYK+I VAFLVLYVDDILLIGNDVG +TD+K WLA QFQMKDLGEAQ+VLGIQI+R+RKNK LALSQA+YIDK+
Subjt: DTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI------
Query: ---------------------------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLIL
YQSNPG HWTAVK +LKYLRRTRDYML+YGAKDLIL
Subjt: ---------------------------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLIL
Query: IRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKR
YTDSDFQTD DSRKSTSGSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLRKFL DLEVVPNM+LP+TLYCDNSGAVANSKEPRSHKR
Subjt: IRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKR
Query: GKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
GKHIERKYHLIREIVQRGDVIVT+IASEHNI DPFTK LT KVFEGHL SLGLR M
Subjt: GKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 0.0e+00 | 55 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP P +N RTVR+ Y+RW KAN+KAR YILAS+S+VLAKKH+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
Query: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
V E N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S K PS+S + KKK G+G K + + K KA KG CF+CN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRY Y+YLM HKSEALEKF+EYK EVEN L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW GRK
Subjt: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDHIR H+PRSK+VL+E+SKE T+ +TRVV++ TRVV V +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
RY+ L ET +I D +EDPLT+K AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVD
Subjt: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
Query: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
YEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNL+E+IYM + EGFI EQ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEP
Subjt: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
CVYKRI+N +VAFLVLYVDDILLIGND+G++TDIK WLATQFQMKDLGEAQFVLGIQI R+RKNK+LALSQASYIDKI
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
Query: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
YQSNPG AHWTAVK ILKYLRRTRDY L+YG+KDLIL YTDSDFQTD DSRK
Subjt: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ DPFTK LT KVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| A0A5A7SNP8 Gag/pol protein | 0.0e+00 | 64.2 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKH----------DVMEE
++++ + +LA++KLNG+NY +WK+ +N +L+IDDL+FVL E+CP P +N RTVR+ Y+RW KAN+KAR YILAS+S+VLAKKH D ++E
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKH----------DVMEE
Query: --------------------------------------------NEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
NEAVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: --------------------------------------------NEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK---------TQQG
Q GEANVA S +K RGS+S K PS+S + KKK G+G K + + K KA KG CF CN+ GHWKRNCPKYLA+KK K T +G
Subjt: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK---------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRY Y+YLM HKSEALEKF+EYK EVEN L KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
AP PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW G K
Subjt: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
GYPK T+GG FYDP++N+VFVSTNATFLEEDHIR H+PRSK+VL+E+SKE T+ +TRVV++ RVV V +S ++H Q LR PRRSGRV P RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
+ L ET +I D +EDPLT+K AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVDYEE
Subjt: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
Query: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
TFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNL+E+IYM + EGFI EQ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVY
Subjt: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
KRI+N +VAFLVLYVDDILLIGND+G++TDIK WLATQFQMKDLGEAQFVLGIQI R+RKNK+LALSQASYIDKI
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
Query: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
YQSNPG AHWTAVK ILKYLRRTRDY L+YG+KDLIL YTDSDFQTD DSRKSTS
Subjt: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
VIVTQIAS HN+ DPFTK LT KVFEGHL SLGLR M
Subjt: VIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| A0A5A7UYE8 Gag/pol protein | 0.0e+00 | 63.49 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMEENEAVIDEKSQ
M++SI+ LL ++L G+NY TWKS LN ILVI DL FVL EECPP P + +++VRDAYDRW KANDKAR++ILAS+SD+L+KKH++M ++D
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMEENEAVIDEKSQ
Query: VSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGQTGEANVAISKKLLRGSSSKNKFGPSTSESVLMKKKGKGKN-KIPTNRKNKVQK
SL + F Q +Q Q EANVA SK+ S PS SE + +K+GKGK I K K +
Subjt: VSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGQTGEANVAISKKLLRGSSSKNKFGPSTSESVLMKKKGKGKN-KIPTNRKNKVQK
Query: ADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------------------------------------------------------------
A K KCF+CN + HWK NCPKYL +KK ++
Subjt: ADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------------------------------------------------------------
Query: ---------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEY
T +GYRAKE LEL+H+DLCGPMNVKARGG+EYFISFIDDYSRY YLYLM HKSEALEKF+EYKTEVENLL K IK LRSDRGGEY
Subjt: ---------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEY
Query: MDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK--------------
MDLRFQDYMIEHGI+SQLSAPG PQQNGVSERRNRTLLDMVRSMMS+AQLP FWGYAVETA +ILN VP+KSVSETP+ELW+GRK
Subjt: MDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK--------------
Query: -------------------GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPS
GYPKET+GGLF+DPQENRVFVSTNATFLEEDH+RNH+PRSKLVLS EATD++TRVVD+ GPS+R VD TSGQSHPS
Subjt: -------------------GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPS
Query: QELRMPRRSGRVITQPDRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTF
Q LRMPRRSGRV++QP+RYL L ETQV+IPDDGVEDPL+YK AMND D+DQW+KAM+LEMESMYFNSVWELVD P+GVKPIGCKWIYKRKRD GKVQTF
Subjt: QELRMPRRSGRVITQPDRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTF
Query: KARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKF
KARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNL+ESI+M++ EGFI Q EQ+VCKL RSIYGLKQASRSWNI+F
Subjt: KARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKF
Query: DTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI------
DTAIKSYGF QNVDEPCVYK+I VAFLVLYVDDILLIGNDVG +TD+K WLA QFQMKDLGEAQ+VLGIQI+R+RKNK LALSQA+YIDK+
Subjt: DTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI------
Query: ---------------------------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLIL
YQSNPG HWTAVK +LKYLRRTRDYML+YGAKDLIL
Subjt: ---------------------------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLIL
Query: IRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKR
YTDSDFQTD DSRKSTSGSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLRKFL DLEVVPNM+LP+TLYCDNSGAVANSKEPRSHKR
Subjt: IRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKR
Query: GKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
GKHIERKYHLIREIVQRGDVIVT+IASEHNI DPFTK LT KVFEGHL SLGLR M
Subjt: GKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| A0A5D3CPJ6 Gag/pol protein | 0.0e+00 | 55 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP P +N RTVR+ Y+RW KAN+KAR YILAS+S+VLAKKH+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
Query: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
V E N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S K PS+S + KKK G+G K + + K KA KG CF+CN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSKNKFGPSTSESVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRY Y+YLM HKSEALEKF+EYK EVEN L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW GRK
Subjt: QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDHIR H+PRSK+VL+E+SKE T+ +TRVV++ TRVV V +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
RY+ L ET +I D +EDPLT+K AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVD
Subjt: DRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVD
Query: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
YEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNL+E+IYM + EGFI EQ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEP
Subjt: YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
CVYKRI+N +VAFLVLYVDDILLIGND+G++TDIK WLATQFQMKDLGEAQFVLGIQI R+RKNK+LALSQASYIDKI
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI----------------------
Query: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
YQSNPG AHWTAVK ILKYLRRTRDY L+YG+KDLIL YTDSDFQTD DSRK
Subjt: -----------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYVAACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ DPFTK LT KVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGLRVM
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| E2GK51 Gag/pol protein (Fragment) | 0.0e+00 | 57.78 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
M SIVQLLASEKLNGDNY+ WKSNLNTILV+DDL+FVLTEECP P N NRTVR+AYDRW+KANDKARVYILAS++DVLAKKHD
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPNSNVNRTVRDAYDRWIKANDKARVYILASISDVLAKKHD--------------
Query: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
+ E N IDE +QVSFI+ SLPKSF F+TN +NKIE+NLT LLNELQ +Q+L +KG
Subjt: ----------------------------------------VMEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAISK-KLLRGSSSKNKFGPSTSESVLMKKKGKGKNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------
+ EANVA++K K +RGSSSKNK GPS ++ MKKKGKG K P K K + ADKGKCF+CN++GHWKRNCPKYLAEKKAEK
Subjt: QTGEANVAISK-KLLRGSSSKNKFGPSTSESVLMKKKGKGKNKIPTNRKNKVQKADKGKCFNCNENGHWKRNCPKYLAEKKAEK----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------------------------TQQG
T +G
Subjt: ------------------------------------------------------------------------------------------------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
RAK LELVH+DLCGPMNVKARGGYEYFISFIDD+SRY ++YL+HHKSE+ EKF+EYK EVEN +GKTIKTLRSDRGGEYMD +FQDY+IE GI+SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
AP PQQNGVSERRNRTLLDMVRSMMS+AQLPD FWGYA+ETA +ILN VP+KSV ETPYELWKGRK
Subjt: APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVSETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
GYPKE++GGLFY PQEN+VFVSTNATFLEEDH RNHQPRSK+VL E+ K ATDK + ST+VVD + S QSH SQELR+PRRSGRV+ QP+RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
L L ETQ+IIPDDGVEDPLTYK AMND DRDQWIKAMNLEMESMYFNSVW LVD P VKPIGCKWIYKRKRDQ GKVQTFKARLVAKGYTQ EGVDYEE
Subjt: LDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEE
Query: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
TFSPVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNL+ESIYM + EGFI QD EQ+VCKL++SIYGLKQASRSWNI+FDTAIKSYGF+QNVDEPCVY
Subjt: TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
K+IVNS VAFL+LYVDDILLIGNDV +TD+K WL TQFQMKDLGEAQ++LGIQIVRNRKNK LA+SQASYIDK+
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-------------------------
Query: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
YQSNPGR HWTAVKNILKYLRRTR+YML+YGAKDLIL YTDSDFQ+D D+RKSTS
Subjt: --------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILIRYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRS+KQ CIADSTMEAEYVAACEAAKE+VWLRKFLTDLEVVPNMHLP+TLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQ
V+VTQ
Subjt: VIVTQ
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 9.9e-98 | 27.74 | Show/hide |
Query: KETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPG
K L +VH+D+CGP+ YF+ F+D ++ Y YL+ +KS+ F+++ + E + L D G EY+ + + ++ GI L+ P
Subjt: KETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPG
Query: MPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSV---SETPYELWKGRKGYPK-------------ETKGGLF---------
PQ NGVSER RT+ + R+M+S A+L FWG AV TATY++N +P++++ S+TPYE+W +K Y K + K G F
Subjt: MPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSV---SETPYELWKGRKGYPK-------------ETKGGLF---------
Query: --YDPQENRVFVSTNATFL--------EEDHIRNHQPRSKLVLSEISKEATDK-----TTRVVDQAGPS-TRVVDGVDTSGQSHPSQELRMPRRSGRVI-
Y+P +++ + N F+ E + + + + + V + SKE+ +K + +++ P+ ++ D + S S+ P S ++I
Subjt: --YDPQENRVFVSTNATFL--------EEDHIRNHQPRSKLVLSEISKEATDK-----TTRVVDQAGPS-TRVVDGVDTSGQSHPSQELRMPRRSGRVI-
Query: --------------------------------TQPDRYLD------------LAETQVIIPDDGVEDP---------------------LTY--------
+ D +L+ +ET + + G+++P ++Y
Subjt: --------------------------------TQPDRYLD------------LAETQVIIPDDGVEDP---------------------LTY--------
Query: KLAMN-----------------DEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSP
K+ +N +D+ W +A+N E+ + N+ W + +P+ + +W++ K ++ G +KARLVA+G+TQ +DYEETF+P
Subjt: KLAMN-----------------DEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSP
Query: VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY---K
VA + S R +LS+ Y+ ++ QMDVKTAFLNG L E IYM +G + VCKL ++IYGLKQA+R W F+ A+K F + + C+Y K
Subjt: VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY---K
Query: RIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI--------------------------
+N + +++LYVDD+++ D+ M + K +L +F+M DL E + +GI+I +++KI LSQ++Y+ KI
Subjt: RIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI--------------------------
Query: ------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYG---AKDLILIRYTDSDFQTDVDSRKSTSGSVFT
Y S W +K +L+YL+ T D L++ A + +I Y DSD+ RKST+G +F
Subjt: ------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYG---AKDLILIRYTDSDFQTDVDSRKSTSGSVFT
Query: L-NGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVT
+ + I W + +Q +A S+ EAEY+A EA +E++WL+ LT + + + P+ +Y DN G ++ + P HKR KHI+ KYH RE VQ + +
Subjt: L-NGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVT
Query: QIASEHNIVDPFTKLLTTKVFEGHLVSLGL
I +E+ + D FTK L F LGL
Subjt: QIASEHNIVDPFTKLLTTKVFEGHLVSLGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-144 | 36 | Show/hide |
Query: RAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSA
R L+LV++D+CGPM +++ GG +YF++FIDD SR ++Y++ K + + F+++ VE G+ +K LRSD GGEY F++Y HGIR + +
Subjt: RAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSA
Query: PGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVS-ETPYELWKGRK---------------------------------
PG PQ NGV+ER NRT+++ VRSM+ A+LP FWG AV+TA Y++N P+ ++ E P +W ++
Subjt: PGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVS-ETPYELWKGRK---------------------------------
Query: --GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEI----------------SKEATDKTTRVVDQAGPSTRVVDGVDTSGQ--SHP
GY E G +DP + +V S + F E +R S+ V + I ++ TD+ + +Q G + +D + HP
Subjt: --GYPKETKGGLFYDPQENRVFVSTNATFLEEDHIRNHQPRSKLVLSEI----------------SKEATDKTTRVVDQAGPSTRVVDGVDTSGQ--SHP
Query: SQ--ELRMP-RRSGRVITQPDRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK
+Q E P RRS R + RY + V+I DD +P + K ++ +++Q +KAM EMES+ N ++LV+ P G +P+ CKW++K K+D K
Subjt: SQ--ELRMP-RRSGRVITQPDRYLDLAETQVIIPDDGVEDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK
Query: VQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSW
+ +KARLV KG+ Q +G+D++E FSPV + SIR +LS+A D E+ Q+DVKTAFL+G+L+E IYM + EGF + VCKL +S+YGLKQA R W
Subjt: VQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSW
Query: NIKFDTAIKSYGFKQNVDEPCVY-KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-
+KFD+ +KS + + +PCVY KR + L+LYVDD+L++G D G++ +K L+ F MKDLG AQ +LG++IVR R ++ L LSQ YI+++
Subjt: NIKFDTAIKSYGFKQNVDEPCVY-KRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-
Query: --------------------------------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGA
+ NPG+ HW AVK IL+YLR T L +G
Subjt: --------------------------------------------------------------------YQSNPGRAHWTAVKNILKYLRRTRDYMLMYGA
Query: KDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEP
D IL YTD+D D+D+RKS++G +FT +GGAI W+S Q C+A ST EAEY+AA E KE +WL++FL +L + ++ +YCD+ A+ SK
Subjt: KDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEP
Query: RSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFE
H R KHI+ +YH IRE+V + V +I++ N D TK++ FE
Subjt: RSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 4.4e-21 | 28.9 | Show/hide |
Query: MDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGI
MDV TAFLN +DE IY+ + GF+ + + V +L +YGLKQA WN + +K GF ++ E +Y R + ++ +YVDD+L+ I
Subjt: MDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGI
Query: MTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-----------------------------------YQS---------NPGR-
+K L + MKDLG+ LG+ I N + LS YI K YQS N GR
Subjt: MTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKI-----------------------------------YQS---------NPGR-
Query: ------------------AHWTAVKNILKYLRRTRDYMLMY-GAKDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIK-QGCIADSTMEAEYV
H + + +L+YL TR L Y L L Y D+ D ST G V L G + W S K +G I + EAEY+
Subjt: ------------------AHWTAVKNILKYLRRTRDYMLMY-GAKDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIK-QGCIADSTMEAEYV
Query: AACEAAKE
A E E
Subjt: AACEAAKE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.8e-82 | 25.9 | Show/hide |
Query: NCPKYLAEK--KAEKTQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEY
+C L K K +Q + LE +++D+ + + Y Y++ F+D ++RY +LY + KS+ E F +K +EN I T SD GGE+
Subjt: NCPKYLAEK--KAEKTQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEY
Query: MDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVS-ETPYEL------------------
+ L +Y +HGI S P P+ NG+SER++R +++ +++S A +P +W YA A Y++N +PT + E+P++
Subjt: MDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVS-ETPYEL------------------
Query: --W-----------KGRK----GYPKETKGGLFYDPQENRVFVSTNATFLE---------------------------------------------EDH-
W K R+ GY L Q +R+++S + F E + H
Subjt: --W-----------KGRK----GYPKETKGGLFYDPQENRVFVSTNATFLE---------------------------------------------EDH-
Query: -----------IRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPS-----------------QELRMPRRSGRVITQPDRYLDLA
RN Q S + S S + T Q+H S Q L P +S P +
Subjt: -----------IRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGVDTSGQSHPS-----------------QELRMPRRSGRVITQPDRYLDLA
Query: ETQVIIPDDGVEDP------------------------------------LTYKLAMNDEDR--------DQWIKAMNLEMESMYFNSVWELVDQPDG-V
T P + P L LA E R ++W AM E+ + N W+LV P V
Subjt: ETQVIIPDDGVEDP------------------------------------LTYKLAMNDEDR--------DQWIKAMNLEMESMYFNSVWELVDQPDG-V
Query: KPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQR
+GC+WI+ +K + G + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A + I Q+DV AFL G L + +YM++ GFI++D
Subjt: KPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQR
Query: VCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNR
VCKL++++YGLKQA R+W ++ + + GF +V + ++ ++ ++++YVDDIL+ GND ++ + L+ +F +KD E + LGI+ R
Subjt: VCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNR
Query: KNKILALSQASYI-DKIYQSN-------------------------------------------------------------PGRAHWTAVKNILKYLRR
L LSQ YI D + ++N P H A+K IL+YL
Subjt: KNKILALSQASYI-DKIYQSN-------------------------------------------------------------PGRAHWTAVKNILKYLRR
Query: TRDY-MLMYGAKDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCD
T ++ + + L L Y+D+D+ D D ST+G + L I W S KQ + S+ EAEY + + E W+ LT+L + + P +YCD
Subjt: TRDY-MLMYGAKDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCD
Query: NSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGL
N GA P H R KHI YH IR VQ G + V +++ + D TK L+ F+ +G+
Subjt: NSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.8e-84 | 26.16 | Show/hide |
Query: AKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAP
+ + LE +++D+ + + Y Y++ F+D ++RY +LY + KS+ + F +K+ VEN I TL SD GGE++ LR DY+ +HGI S P
Subjt: AKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYDYLYLMHHKSEALEKFREYKTEVENLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAP
Query: GMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVS-ETPYELWKGR-----------------------------------
P+ NG+SER++R +++M +++S A +P +W YA A Y++N +PT + ++P++ G+
Subjt: GMPQQNGVSERRNRTLLDMVRSMMSFAQLPDLFWGYAVETATYILNMVPTKSVS-ETPYELWKGR-----------------------------------
Query: KGYPKETKGGLFYDPQENRVFVSTNATFLE-------------------EDHIRNHQ-----PRSKLVL--------------SEISKEATDKTTRVVDQ
GY L R++ S + F E D N P + LVL S + TT+V
Subjt: KGYPKETKGGLFYDPQENRVFVSTNATFLE-------------------EDHIRNHQ-----PRSKLVL--------------SEISKEATDKTTRVVDQ
Query: AGPSTRVV------------DGVDTSGQSHPSQE-------LRMPRRSGRVITQPDRYLDLAETQVIIP-------------------------------
PS+ + +G + Q H +Q L P + P++ L ++ + P
Subjt: AGPSTRVV------------DGVDTSGQSHPSQE-------LRMPRRSGRVITQPDRYLDLAETQVIIP-------------------------------
Query: ---------------------DDGVEDP-----LTYKLAMNDEDR--------DQWIKAMNLEMESMYFNSVWELV-DQPDGVKPIGCKWIYKRKRDQTG
DG+ P LA N E R D+W +AM E+ + N W+LV P V +GC+WI+ +K + G
Subjt: ---------------------DDGVEDP-----LTYKLAMNDEDR--------DQWIKAMNLEMESMYFNSVWELV-DQPDGVKPIGCKWIYKRKRDQTG
Query: KVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRS
+ +KARLVAKGY Q G+DY ETFSPV SIRI+L +A + I Q+DV AFL G L + +YM++ GF+++D VC+L+++IYGLKQA R+
Subjt: KVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHEQRVCKLKRSIYGLKQASRS
Query: WNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASY-IDKI
W ++ T + + GF ++ + ++ ++ ++++YVDDIL+ GND ++ L+ +F +K+ + + LGI+ R + L LSQ Y +D +
Subjt: WNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASY-IDKI
Query: YQSN-------------------------------------------------------------PGRAHWTAVKNILKYLRRTRDY-MLMYGAKDLILI
++N P HW A+K +L+YL T D+ + + L L
Subjt: YQSN-------------------------------------------------------------PGRAHWTAVKNILKYLRRTRDY-MLMYGAKDLILI
Query: RYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRG
Y+D+D+ D D ST+G + L I W S KQ + S+ EAEY + + E W+ LT+L + + P +YCDN GA P H R
Subjt: RYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRG
Query: KHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGL
KHI YH IR VQ G + V +++ + D TK L+ F+ +G+
Subjt: KHIERKYHLIREIVQRGDVIVTQIASEHNIVDPFTKLLTTKVFEGHLVSLGL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.0e-69 | 33.68 | Show/hide |
Query: EDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILL
++P TY A ++ W AM+ E+ +M WE+ P KPIGCKW+YK K + G ++ +KARLVAKGYTQ EG+D+ ETFSPV L S++++L
Subjt: EDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHE----QRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFL
+I+ Y++ + Q+D+ AFLNG+LDE IYM G+ + + VC LK+SIYGLKQASR W +KF + +GF Q+ + + +I + +
Subjt: SIATFYDYEIWQMDVKTAFLNGNLDESIYMAKLEGFIEQDHE----QRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFL
Query: VLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRN--------RKNKI------------------------LALSQASYID-KIYQS
++YVDDI++ N+ + ++K L + F+++DLG ++ LG++I R+ RK + A S ++D K Y+
Subjt: VLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRN--------RKNKI------------------------LALSQASYID-KIYQS
Query: NPGR---------------------------AHWTAVKNILKYLRRTRDYMLMYGAK-DLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQG
GR AH AV IL Y++ T L Y ++ ++ L ++D+ FQ+ D+R+ST+G L I W+S KQ
Subjt: NPGR---------------------------AHWTAVKNILKYLRRTRDYMLMYGAK-DLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQG
Query: CIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
++ S+ EAEY A A E +WL +F +L++ + P L+CDN+ A+ + H+R KHIE H +RE
Subjt: CIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 7.5e-08 | 23.89 | Show/hide |
Query: FLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKIYQS-------------------------------
+L+LYVDDILL G+ ++ + L++ F MKDLG + LGIQI + L LSQ Y ++I +
Subjt: FLVLYVDDILLIGNDVGIMTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKILALSQASYIDKIYQS-------------------------------
Query: ------------------------------NPGRAHWTAVKNILKYLRRTRDY-MLMYGAKDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSI
P A + +K +L+Y++ T + + ++ L + + DSD+ +R+ST+G L I W +
Subjt: ------------------------------NPGRAHWTAVKNILKYLRRTRDY-MLMYGAKDLILIRYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSI
Query: KQGCIADSTMEAEYVAACEAAKESVW
+Q ++ S+ E EY A A E W
Subjt: KQGCIADSTMEAEYVAACEAAKESVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.3e-15 | 37.86 | Show/hide |
Query: EDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILL
++P + A+ D W +AM E++++ N W LV P +GCKW++K K G + KARLVAKG+ Q EG+ + ET+SPV +IR +L
Subjt: EDPLTYKLAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQSEGVDYEETFSPVAMLKSIRILL
Query: SIA
++A
Subjt: SIA
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