| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6571215.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 2.9e-279 | 98.63 | Show/hide |
Query: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Subjt: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSFDQT+LAD RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
R+MEAMLLKH
Subjt: RKMEAMLLKH
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| KAG7011018.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. argyrosperma] | 8.4e-279 | 98.62 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVEALLLLQKSMLEKQWNLSFDQT+LAD RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKTR
Query: KMEAMLLKH
+MEAMLLKH
Subjt: KMEAMLLKH
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| XP_022943800.1 RNA polymerase sigma factor sigA-like [Cucurbita moschata] | 7.3e-283 | 100 | Show/hide |
Query: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Subjt: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| XP_022986506.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 3.5e-269 | 96.27 | Show/hide |
Query: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
MMATTTAITGLGAAKRL NSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSS NFSPRNQSSNRH HCIKA PSSPTAEP LHNSTIWE
Subjt: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVE LLLLQKSMLEKQWNLSFDQTVLADA RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTIN ELLQNRLKGYV+
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLG+REREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| XP_023513025.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 3.0e-276 | 97.85 | Show/hide |
Query: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSN-RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIW
MMATTTAITGLGAAKRLFNSSSYYSDFTEK+LY NDHRIGQTQVSPTKSVVITARSS NFSPRNQSS+ RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIW
Subjt: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSN-RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIW
Query: EDEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYV
EDEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADA RGKTQKKVPVTCSGVSARQRRMSS+RKIQSKHVLMAQPRISKQLRPTIN ELLQNRLKGYV
Subjt: EDEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYV
Query: RGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQG
RGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQG
Subjt: RGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQG
Query: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLD
GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLD
Subjt: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLD
Query: REAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
REAFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
Subjt: REAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
Query: TRKMEAMLLKH
TRKMEAMLLKH
Subjt: TRKMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 6.5e-253 | 90.39 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
M TTAI GLGAAKRL NSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SSANFSP SNRH CIKAVKEHV+TPSSPTAEP L N+TIWE
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSF+QTV D R KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISKQLRPTI+PELLQNRLKGYV+
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTD W+LKAEVN LI TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ+GLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 6.5e-253 | 90.39 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
M TTAI GLGAAKRL NSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SSANFSP SNRH CIKAVKEHV+TPSSPTAEP L N+TIWE
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSF+QTV D R KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISKQLRPTI+PELLQNRLKGYV+
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTD W+LKAEVN LI TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ+GLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 9.8e-249 | 89 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
M T AI GLGAAKRL NSSSYYSDF EK+LYANDHR+GQ+QVSPTKSVVI A+SSANFSP SSNRH CIKAVKEHVDTPSSPT EP L NST WED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EE DLKCTVEALLLLQKSMLEKQWNLSF+QTV DA RG+TQKKVPVTCSGVSARQRRMSSKRKIQSK+ M QP+ISKQLR TI+PELLQ RLKGYV+G
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR +LRS V+ECSLA+EKLAMSNVRLVMSIAQRYD MGAEM DLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKVRLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTD W+LKAEVN LI TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ+GLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A6J1FYA0 RNA polymerase sigma factor sigA-like | 3.6e-283 | 100 | Show/hide |
Query: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Subjt: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| A0A6J1J7Q5 RNA polymerase sigma factor sigA-like | 1.7e-269 | 96.27 | Show/hide |
Query: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
MMATTTAITGLGAAKRL NSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSS NFSPRNQSSNRH HCIKA PSSPTAEP LHNSTIWE
Subjt: MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVE LLLLQKSMLEKQWNLSFDQTVLADA RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTIN ELLQNRLKGYV+
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLG+REREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 1.1e-39 | 37.22 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR + +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V K+L + SRM+RLP HM E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNL--ITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
+ N P E IAD DI + + +L + +LG RE+++IR G+ D T +EI + +G+SRERVRQI A KLK +
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNL--ITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
Query: TRKMEAMLL
++ L+
Subjt: TRKMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 2.1e-179 | 67.12 | Show/hide |
Query: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
T A+ GL KRL +SS Y+SD TEK L NDH Q ++ TKS ITA+ ++N+SP SSNRH KA+KE VD S T +P L N T E
Subjt: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
Query: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGK---TQKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQN
D++ + +VEA+LLLQKSMLEK WNLSF++ V ++ GK +KK+PV TCSG+SARQRR+ +K+K HV ++ KQ+R
Subjt: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGK---TQKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQN
Query: RLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEM
GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM
Subjt: RLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEM
Query: DDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGLIRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+S
Subjt: DDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+ LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQ+GLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| P38023 RNA polymerase sigma factor SigA1 | 3.0e-37 | 33.55 | Show/hide |
Query: QNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGA
++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ + R + A++K+ SN+RLV+SIA++Y G
Subjt: QNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGA
Query: EMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLI-RNAKVRLQEKGITPSIDRIAESLNMSKKKV----K
DL+Q G +GL+R EKFD KG+K STY WWIRQ +++A+ + SR +RLP H++E + I + K+ QE G P+ + IA + M+ +K+ K
Subjt: EMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLI-RNAKVRLQEKGITPSIDRIAESLNMSKKKV----K
Query: NATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRER
+A IS + +E L GET +A N +L+ ++ ++ +TL RER+++RL +GLD+ T EEI + ++RER
Subjt: NATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRER
Query: VRQIGLVALEKLK
+RQI AL KL+
Subjt: VRQIGLVALEKLK
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| Q03065 RNA polymerase sigma-B factor | 1.2e-38 | 33.11 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLR
LLSH + + +++++ + + K L E+L EP+ + A +++ L + + +A++K+ +N+RLV+SIA++Y K E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG+++A+ + SR +RLP HM ++L I+ + L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVALEKLKK
G +T + D+ + +P + +L +++NL+ L +++E++ L GL C LT +IS+R+G+SRERVRQ+ AL L++
Subjt: LNGLPGETH-HSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVALEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 6.5e-125 | 48.96 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSD-FTEKVLY-------------ANDHRIGQTQVSPTKSVVITARSSANFSPRNQSS-----NRHGHCIKAVKEHVD
M T A+ GL A RL ++S +D +KV D T + A SP ++ H A+
Subjt: MATTTAITGLGAAKRLFNSSSYYSD-FTEKVLY-------------ANDHRIGQTQVSPTKSVVITARSSANFSPRNQSS-----NRHGHCIKAVKEHVD
Query: TPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFDQ------TVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQP
P PT P + DL+ ++EA++LLQ+SMLEKQW L FD LA+ ++ V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFDQ------TVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQP
Query: RISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNV
+ ++PEL+Q+R + Y+RG +S+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS +LRS + E LARE L MSN+
Subjt: RISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNV
Query: RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAE
RLV+SIAQ+YD +G E+ DL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVS+AL ENS+ RLPT++HERL IR AK L+++GI P+I+ IA
Subjt: RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN L+ +TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQIGLVALEKLKKAAKTRKMEAML
GLSRERVRQ+GL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQIGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 7.9e-41 | 37.22 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR + +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V K+L + SRM+RLP HM E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNL--ITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
+ N P E IAD DI + + +L + +LG RE+++IR G+ D T +EI + +G+SRERVRQI A KLK +
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNL--ITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAK
Query: TRKMEAMLL
++ L+
Subjt: TRKMEAMLL
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| AT1G64860.1 sigma factor A | 1.5e-180 | 67.12 | Show/hide |
Query: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
T A+ GL KRL +SS Y+SD TEK L NDH Q ++ TKS ITA+ ++N+SP SSNRH KA+KE VD S T +P L N T E
Subjt: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
Query: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGK---TQKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQN
D++ + +VEA+LLLQKSMLEK WNLSF++ V ++ GK +KK+PV TCSG+SARQRR+ +K+K HV ++ KQ+R
Subjt: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGK---TQKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQN
Query: RLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEM
GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM
Subjt: RLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEM
Query: DDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGLIRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+S
Subjt: DDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+ LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQ+GLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 4.6e-166 | 66.05 | Show/hide |
Query: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
T A+ GL KRL +SS Y+SD TEK L NDH Q ++ TKS ITA+ ++N+SP SSNRH KA+KE VD S T +P L N T E
Subjt: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
Query: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGK---TQKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQN
D++ + +VEA+LLLQKSMLEK WNLSF++ V ++ GK +KK+PV TCSG+SARQRR+ +K+K HV ++ KQ+R
Subjt: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTVLADALRGK---TQKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQN
Query: RLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEM
GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM
Subjt: RLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEM
Query: DDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGLIRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+S
Subjt: DDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+ LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.7e-35 | 32.27 | Show/hide |
Query: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y G
Subjt: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNA-KVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + K++ +NSR +RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNA-KVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQIGLVALE
S+ + + + T D+ +E P +++ V NL+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQIGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 2.9e-35 | 34.02 | Show/hide |
Query: SSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSS
S KR+ + + + R+ + E + V G LS E V+L +K G LE T ++E + +++ L R K + S
Subjt: SSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSS
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + +A+ SR+++LP M E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIR
Query: NAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ L+ +L RE +
Subjt: NAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWVLKAEVNNLITTTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQI +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVALEKLK
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