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CmoCh20G010080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpolyamine-modulated factor 1-binding protein 1
Genome locationCmo_Chr20:6235633..6248970
RNA-Seq ExpressionCmoCh20G010080
SyntenyCmoCh20G010080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571252.1 hypothetical protein SDJN03_30167, partial [Cucurbita argyrosperma subsp. sororia]9.2e-4082.88Show/hide
Query:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFEGEM
        NADEKKQSQMDGVGDRICRL ESERLKNVEIERLKDENN LVLKVEEEREKWMNVCCERDGIKAN  GLLEEIGDLIKKMIEMEKNER ALEER      
Subjt:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFEGEM

Query:  HEEKMESEIIN
         + K++ E++N
Subjt:  HEEKMESEIIN

KAG6590400.1 hypothetical protein SDJN03_15823, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3086.9Show/hide
Query:  MDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE
        MD VGDRICRLVESERLKNVEI RLKDENNGLV KVEEEREKWM VCCERD IK N+DGLLEEIG L KKMIEMEKNER AL+E
Subjt:  MDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE

XP_022971789.1 uncharacterized protein LOC111470467 [Cucurbita maxima]8.3e-3372.17Show/hide
Query:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFE---
        NADEKK SQMD VGDRICRLVESERLKNV+I RLKDENNGLVLKVEEEREKW+ VC ERD I+ N+DGL +EI DL KKMIEMEKNE+  LEE  +    
Subjt:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFE---

Query:  -GEMHEEKMESEIIN
          ++  EKMESEI+N
Subjt:  -GEMHEEKMESEIIN

XP_022971792.1 protein MNN4-like [Cucurbita maxima]6.4e-3374.14Show/hide
Query:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDG-LLEEIGDLIKKMIEMEKNERMALEE-RGFEG
        NAD+KKQ+QM+ VGDRICRLVESERLKNVEIERLKD+NNGLVLKVEEEREKWM VCCERDGIKAN D  L EE  DL KKMIE+EKNE+ ALEE    E 
Subjt:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDG-LLEEIGDLIKKMIEMEKNERMALEE-RGFEG

Query:  EMHE---EKMESEIIN
        +  +   E+MESEI+N
Subjt:  EMHE---EKMESEIIN

XP_023537259.1 myosin-7B-like [Cucurbita pepo subsp. pepo]1.0e-3071.56Show/hide
Query:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE
        Q+QM+ +G  ICRLVESER+KNVEI RLK ENNGLVLKVEEEREKWM VCCERDGIKA+FDGL EE GDL +KM+EMEKNER ALEE    +    ++  
Subjt:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE

Query:  EKMESEIIN
        EKMESEI+N
Subjt:  EKMESEIIN

TrEMBL top hitse value%identityAlignment
A0A5D3D489 Cingulin3.0e-2055.96Show/hide
Query:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE
        QS+++ +   I  L+ESER+K +EI  LK E NGLVL+VEEEREKW  VCCERD IK  FDGLL+E GDL  K++EME+NER  LEE    +G   ++  
Subjt:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE

Query:  EKMESEIIN
        EK E EI+N
Subjt:  EKMESEIIN

A0A6J1FD80 polyamine-modulated factor 1-binding protein 18.4e-3170.64Show/hide
Query:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE
        Q+QM+ +G  ICRLVESER+KNVEI RLK ENNGLVLKVEEEREKWM VCCERDGIKA+FDGL EE GDL +KM+EMEKNER ALEE    +    ++  
Subjt:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE

Query:  EKMESEIIN
        EKMESE++N
Subjt:  EKMESEIIN

A0A6J1HKX2 polyamine-modulated factor 1-binding protein 11.3e-2869.72Show/hide
Query:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE
        Q+QM+ +G  ICRLVESER KNVEI RLK ENNGLVLK EEEREKWM VC ERDGIKA+FDGL EE GDL +KM+EMEKNER ALEE    +    ++  
Subjt:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEE----RGFEGEMHE

Query:  EKMESEIIN
        EKMESEI N
Subjt:  EKMESEIIN

A0A6J1I2X9 protein MNN4-like3.1e-3374.14Show/hide
Query:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDG-LLEEIGDLIKKMIEMEKNERMALEE-RGFEG
        NAD+KKQ+QM+ VGDRICRLVESERLKNVEIERLKD+NNGLVLKVEEEREKWM VCCERDGIKAN D  L EE  DL KKMIE+EKNE+ ALEE    E 
Subjt:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDG-LLEEIGDLIKKMIEMEKNERMALEE-RGFEG

Query:  EMHE---EKMESEIIN
        +  +   E+MESEI+N
Subjt:  EMHE---EKMESEIIN

A0A6J1I9J8 uncharacterized protein LOC1114704674.0e-3372.17Show/hide
Query:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFE---
        NADEKK SQMD VGDRICRLVESERLKNV+I RLKDENNGLVLKVEEEREKW+ VC ERD I+ N+DGL +EI DL KKMIEMEKNE+  LEE  +    
Subjt:  NADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFE---

Query:  -GEMHEEKMESEIIN
          ++  EKMESEI+N
Subjt:  -GEMHEEKMESEIIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27330.1 Prefoldin chaperone subunit family protein8.4e-0734.83Show/hide
Query:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERG
        + ++  +G  +  L + +  +  EI  LK E NGL+ K+E ERE++  VC ERD +K+ FD   EE+  L + ++ +E  E    EE G
Subjt:  QSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGAGTATGAATGCCGACGAGAAGAAACAGAGTCAAATGGATGGAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATAGA
GAGATTGAAAGATGAGAATAATGGGCTTGTGTTGAAAGTTGAGGAAGAAAGGGAGAAATGGATGAATGTCTGTTGTGAGAGGGATGGAATTAAGGCTAATTTCGATGGAT
TGCTTGAGGAAATAGGAGATTTGATAAAGAAAATGATTGAGATGGAGAAGAATGAGAGAATGGCTTTAGAAGAGAGAGGGTTTGAAGGTGAAATGCACGAAGAAAAGATG
GAGAGTGAGATTATTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGAGTATGAATGCCGACGAGAAGAAACAGAGTCAAATGGATGGAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATAGA
GAGATTGAAAGATGAGAATAATGGGCTTGTGTTGAAAGTTGAGGAAGAAAGGGAGAAATGGATGAATGTCTGTTGTGAGAGGGATGGAATTAAGGCTAATTTCGATGGAT
TGCTTGAGGAAATAGGAGATTTGATAAAGAAAATGATTGAGATGGAGAAGAATGAGAGAATGGCTTTAGAAGAGAGAGGGTTTGAAGGTGAAATGCACGAAGAAAAGATG
GAGAGTGAGATTATTAATTGA
Protein sequenceShow/hide protein sequence
MMKSMNADEKKQSQMDGVGDRICRLVESERLKNVEIERLKDENNGLVLKVEEEREKWMNVCCERDGIKANFDGLLEEIGDLIKKMIEMEKNERMALEERGFEGEMHEEKM
ESEIIN