| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW33148.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.8e-56 | 52.87 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
M ATW DS+ES+ E EVAN CFMA D ++ SKK+KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G I +
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
Query: RNFGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
+ G L + D ++ KEE L + E S +PK+W SEFEMSMMGEL+FFLGLQIKHLK G FINQ KY
Subjt: RNFGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
+DLLKRF K +TPMS+S KLDKDEKGKS+D YRGMIGSLLYLTASRPDIM S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| RVW36924.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.6e-55 | 52.49 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
M ATW +S+ES+ +E EVAN CFMA D ++ SKK+KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G I E
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
Query: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
+ G L + D +E+V KEE L + E S +PK+W SEFEMSMMGEL+FFLGLQIK LK G FINQ KY
Subjt: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
+DLLKRF K +TPMS+S KLD DEKGK V+ YRGMIGSLLYLTASRPDIM+S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| RVW73244.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 5.2e-56 | 51.72 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
M ATW +S+ES+ +E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G +E +
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
Query: FGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW---------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
G L + D ++ + KEE L + E S +PK+W SEFEMSMMGEL+FFLGLQIK LK GIFINQ KY
Subjt: FGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW---------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
KDLLKRF K+ +TPM++S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| RVX10821.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.2e-52 | 53.36 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G +E +
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
Query: FGDLLVSDNDKEIVTSKEEMSLKEEGSSSMPKE----------WSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTS
L + D ++ EE KEE ++P SEFEMSMMGEL+FFLGLQIK LK G FINQ KY KDLLKRF K+ +TPMS+S
Subjt: FGDLLVSDNDKEIVTSKEEMSLKEEGSSSMPKE----------WSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTS
Query: TKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
KLD DEK KS+D YR +IG LLYLTASRPDIM+S+
Subjt: TKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| RVX21766.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 4.5e-52 | 51.72 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
M ATW +S+ES +E EVAN CFMA D ++ S K+KW+LDSGCSRHMTGN SKFV L+K+ GG VTFGDN K +IIG+G I E
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
Query: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
+ G L + D +E+V T KEE L + E S +PK+W SEFEMSMM EL+ FLGLQIK LK FINQ KY
Subjt: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
KDLLKRF K +TPMS+S KLD DEKGK V+ YR MIGSLLYLTASRPDIM+S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438DCH9 Retrovirus-related Pol polyprotein from transposon RE1 | 8.6e-57 | 52.87 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
M ATW DS+ES+ E EVAN CFMA D ++ SKK+KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G I +
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
Query: RNFGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
+ G L + D ++ KEE L + E S +PK+W SEFEMSMMGEL+FFLGLQIKHLK G FINQ KY
Subjt: RNFGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
+DLLKRF K +TPMS+S KLDKDEKGKS+D YRGMIGSLLYLTASRPDIM S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| A0A438DNB1 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-55 | 52.49 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
M ATW +S+ES+ +E EVAN CFMA D ++ SKK+KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G I E
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
Query: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
+ G L + D +E+V KEE L + E S +PK+W SEFEMSMMGEL+FFLGLQIK LK G FINQ KY
Subjt: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
+DLLKRF K +TPMS+S KLD DEKGK V+ YRGMIGSLLYLTASRPDIM+S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| A0A438GM43 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-56 | 51.72 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
M ATW +S+ES+ +E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G +E +
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
Query: FGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW---------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
G L + D ++ + KEE L + E S +PK+W SEFEMSMMGEL+FFLGLQIK LK GIFINQ KY
Subjt: FGDLLVSDNDKEIVT----SKEEMSL--------KEEGSSSMPKEW---------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
KDLLKRF K+ +TPM++S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| A0A438JPC8 Retrovirus-related Pol polyprotein from transposon RE1 | 5.8e-53 | 53.36 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G +E +
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERN
Query: FGDLLVSDNDKEIVTSKEEMSLKEEGSSSMPKE----------WSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTS
L + D ++ EE KEE ++P SEFEMSMMGEL+FFLGLQIK LK G FINQ KY KDLLKRF K+ +TPMS+S
Subjt: FGDLLVSDNDKEIVTSKEEMSLKEEGSSSMPKE----------WSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTS
Query: TKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
KLD DEK KS+D YR +IG LLYLTASRPDIM+S+
Subjt: TKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| A0A438KKN1 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-52 | 51.72 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
M ATW +S+ES +E EVAN CFMA D ++ S K+KW+LDSGCSRHMTGN SKFV L+K+ GG VTFGDN K +IIG+G I E
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDNEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTI--E
Query: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
+ G L + D +E+V T KEE L + E S +PK+W SEFEMSMM EL+ FLGLQIK LK FINQ KY
Subjt: RNFGDLLVSD--NDKEIV--TSKEEMSL--------KEEGSSSMPKEW-------------------SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKY
Query: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
KDLLKRF K +TPMS+S KLD DEKGK V+ YR MIGSLLYLTASRPDIM+S+
Subjt: TKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.7e-06 | 28.82 | Show/hide |
Query: KFVNLSKKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNDKEIVTSKEEMSLKEEGSSSMPKEWSEFEMSMMGELSFFLGLQI--KHLKNGIFINQEK
KF + K L T+ D + K E NF LL+ +D IV + + K +G S F+M +G LG++I + ++++QEK
Subjt: KFVNLSKKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNDKEIVTSKEEMSLKEEGSSSMPKEWSEFEMSMMGELSFFLGLQI--KHLKNGIFINQEK
Query: YTKDLLKRFKFNGGKIARTPMSTSTKLDK-------DEKGKSVDIKAYRGMIGSLLY-LTASRPDIMFSI
Y + +L+RF K TP++ KL K +EKG + Y +GSL+Y + +RPDI ++
Subjt: YTKDLLKRFKFNGGKIARTPMSTSTKLDK-------DEKGKSVDIKAYRGMIGSLLY-LTASRPDIMFSI
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.1e-08 | 36.08 | Show/hide |
Query: SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK---GKSVDIKAYRGMIGSLLYLTASRPDIMFSI
S F M +G + +FLG+QIK +G+F++Q KY + +L N G + PMST L + K D +R ++G+L YLT +RPDI +++
Subjt: SEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK---GKSVDIKAYRGMIGSLLYLTASRPDIMFSI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.9e-10 | 30.95 | Show/hide |
Query: DLLVSDNDKEIVTSKEEMSLKEEGSSSMPKEWSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSV
D+L++ ND ++ +++ F + EL +FLG++ K + G+ ++Q +Y DLL R K TPM+ S KL K
Subjt: DLLVSDNDKEIVTSKEEMSLKEEGSSSMPKEWSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSV
Query: DIKAYRGMIGSLLYLTASRPDIMFSI
D YRG++GSL YL +RPDI +++
Subjt: DIKAYRGMIGSLLYLTASRPDIMFSI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-10 | 32.77 | Show/hide |
Query: DKEIVTSKEEMSLKEEGSSSMPKEWSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRG
D ++T + + LK ++ F + +L +FLG++ K + G+ ++Q +YT DLL R K TPM+TS KL K D YRG
Subjt: DKEIVTSKEEMSLKEEGSSSMPKEWSEFEMSMMGELSFFLGLQIKHLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRG
Query: MIGSLLYLTASRPDIMFSI
++GSL YL +RPD+ +++
Subjt: MIGSLLYLTASRPDIMFSI
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