; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G010240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCCHC-type domain-containing protein
Genome locationCmo_Chr20:7581623..7582927
RNA-Seq ExpressionCmoCh20G010240
SyntenyCmoCh20G010240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8719102.1 hypothetical protein F3Y22_tig00109972pilonHSYRG00011 [Hibiscus syriacus]1.6e-3745.11Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEG------------------------------LEEPK--------------ETVVNQLNRN
        MANVTG M LPRL K  YENWSI MKALLGSQDAWEVVEE                               LE  K              +TVVNQLNRN
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEG------------------------------LEEPK--------------ETVVNQLNRN

Query:  GEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLE----------------------EEVADQFTPTF----------SATN
        GE L E RV+EKILRSLT+NFENVVCAIEES DLAT  VNEL GSLEAHEQ +                      +E      P +             N
Subjt:  GEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLE----------------------EEVADQFTPTF----------SATN

Query:  VTNMIT---------LQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNE
         +N+            +   +         GHF KDCRADKKVE+ INLAL+D  NE  LLMAQNE
Subjt:  VTNMIT---------LQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNE

XP_022933038.1 uncharacterized protein LOC111439728 [Cucurbita moschata]2.2e-4261.99Show/hide
Query:  EQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVG
        + ++EEVADQFTPTFSATNVTNM+T+QTI+TPTNVT VA+GHFVKDCRA+KKVEE INLALDDAT E LL+MAQNE  K KEH   K DGGS E+VE++G
Subjt:  EQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVG

Query:  NEGIRSGFGNCNIGD-EKIEEGIWIEHAIGERAKETSRSSEGEQRFRATTKIYVDKSVEKSQLQTLKSLNE
        NE IRSGFG   I +  K++E      +  +  K      E         K  VDK VEKSQLQTLKSLNE
Subjt:  NEGIRSGFGNCNIGD-EKIEEGIWIEHAIGERAKETSRSSEGEQRFRATTKIYVDKSVEKSQLQTLKSLNE

XP_022936199.1 uncharacterized protein LOC111442874 [Cucurbita moschata]2.5e-4649.59Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE--------------------------------------TVVNQLNRNGEILAE
        MAN+ G M LPRL KT YENWSI MKALL SQDAWEVVE+G +EPK+                                      TV NQLNRNGE+L E
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE--------------------------------------TVVNQLNRNGEILAE

Query:  PRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKI
         RV+EKILRSLT NFENVVCAIEES DLA F V+ELAGSLEAHEQ +                                    GH+ +DCRA +KVEE I
Subjt:  PRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKI

Query:  NLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGN
        NLALDD T+  +LLMAQNE    K     K DG S+E+VE VGN
Subjt:  NLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGN

XP_022954462.1 uncharacterized protein LOC111456728 [Cucurbita moschata]4.5e-4844.67Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKET----------------------------------------VVNQLNRNGEIL
        MAN+ G M LPRL KT YENWSI MKALLGSQDAWEVVEEG +EPK+T                                        V NQLNRNGE+L
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKET----------------------------------------VVNQLNRNGEIL

Query:  AEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQ---LEEEVADQ------------------------------------------
         E RV+EKILRSLT+NFENV+C IEES ++  FIV+ELAGSLEAHEQ    +EE  DQ                                          
Subjt:  AEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQ---LEEEVADQ------------------------------------------

Query:  --------FTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGNE
                   T SA NV NM+T+              GH+ +DCRA++KVEE INLALDDATN  +LLMAQNE    K     K DGGS E+VE+V NE
Subjt:  --------FTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGNE

XP_022975262.1 uncharacterized protein LOC111474389 [Cucurbita maxima]4.4e-4338.73Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE-----------------------------------------------------
        M N+ G M LPRL KT YENWSI MKALLGSQDAWEV++EG EEPK+                                                     
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE-----------------------------------------------------

Query:  TVVNQLNRNGEILAEPRVLEKILRSLTNNFEN-VVCAIEESNDLATFIVNELAGSLEAHEQL--EEEVADQFTPTFSATNVTNMITLQTI----------
        TV NQLNR GE+L E R++EKILRSLT N EN VVC IEES DLATF V+E+  SLEAHEQ   ++E  D+   T ++ N   ++  Q            
Subjt:  TVVNQLNRNGEILAEPRVLEKILRSLTNNFEN-VVCAIEESNDLATFIVNELAGSLEAHEQL--EEEVADQFTPTFSATNVTNMITLQTI----------

Query:  ------------ITPTNVTIVAD--------------------------------------------GHFVKDCRADKKVEEKINLALDDATNERLLLMA
                         ++  A+                                            GH+ +DCRA++KVEE INLALDDATN  +LLMA
Subjt:  ------------ITPTNVTIVAD--------------------------------------------GHFVKDCRADKKVEEKINLALDDATNERLLLMA

Query:  QNEVQKVKEHDAEKYDGGSYEMVESVGNEGIRSGFGNCNIGDEKIE
        QNE  K KEH + K DG S E +E+V NE +R+  GN + GDEKIE
Subjt:  QNEVQKVKEHDAEKYDGGSYEMVESVGNEGIRSGFGNCNIGDEKIE

TrEMBL top hitse value%identityAlignment
A0A6A3BVR6 Uncharacterized protein7.8e-3845.11Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEG------------------------------LEEPK--------------ETVVNQLNRN
        MANVTG M LPRL K  YENWSI MKALLGSQDAWEVVEE                               LE  K              +TVVNQLNRN
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEG------------------------------LEEPK--------------ETVVNQLNRN

Query:  GEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLE----------------------EEVADQFTPTF----------SATN
        GE L E RV+EKILRSLT+NFENVVCAIEES DLAT  VNEL GSLEAHEQ +                      +E      P +             N
Subjt:  GEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLE----------------------EEVADQFTPTF----------SATN

Query:  VTNMIT---------LQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNE
         +N+            +   +         GHF KDCRADKKVE+ INLAL+D  NE  LLMAQNE
Subjt:  VTNMIT---------LQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNE

A0A6J1F3J2 uncharacterized protein LOC1114397281.1e-4261.99Show/hide
Query:  EQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVG
        + ++EEVADQFTPTFSATNVTNM+T+QTI+TPTNVT VA+GHFVKDCRA+KKVEE INLALDDAT E LL+MAQNE  K KEH   K DGGS E+VE++G
Subjt:  EQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVG

Query:  NEGIRSGFGNCNIGD-EKIEEGIWIEHAIGERAKETSRSSEGEQRFRATTKIYVDKSVEKSQLQTLKSLNE
        NE IRSGFG   I +  K++E      +  +  K      E         K  VDK VEKSQLQTLKSLNE
Subjt:  NEGIRSGFGNCNIGD-EKIEEGIWIEHAIGERAKETSRSSEGEQRFRATTKIYVDKSVEKSQLQTLKSLNE

A0A6J1F7M5 uncharacterized protein LOC1114428741.2e-4649.59Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE--------------------------------------TVVNQLNRNGEILAE
        MAN+ G M LPRL KT YENWSI MKALL SQDAWEVVE+G +EPK+                                      TV NQLNRNGE+L E
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE--------------------------------------TVVNQLNRNGEILAE

Query:  PRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKI
         RV+EKILRSLT NFENVVCAIEES DLA F V+ELAGSLEAHEQ +                                    GH+ +DCRA +KVEE I
Subjt:  PRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLEEEVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKI

Query:  NLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGN
        NLALDD T+  +LLMAQNE    K     K DG S+E+VE VGN
Subjt:  NLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGN

A0A6J1GR21 uncharacterized protein LOC1114567282.2e-4844.67Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKET----------------------------------------VVNQLNRNGEIL
        MAN+ G M LPRL KT YENWSI MKALLGSQDAWEVVEEG +EPK+T                                        V NQLNRNGE+L
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKET----------------------------------------VVNQLNRNGEIL

Query:  AEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQ---LEEEVADQ------------------------------------------
         E RV+EKILRSLT+NFENV+C IEES ++  FIV+ELAGSLEAHEQ    +EE  DQ                                          
Subjt:  AEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQ---LEEEVADQ------------------------------------------

Query:  --------FTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGNE
                   T SA NV NM+T+              GH+ +DCRA++KVEE INLALDDATN  +LLMAQNE    K     K DGGS E+VE+V NE
Subjt:  --------FTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGNE

A0A6J1ICK8 uncharacterized protein LOC1114743892.1e-4338.73Show/hide
Query:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE-----------------------------------------------------
        M N+ G M LPRL KT YENWSI MKALLGSQDAWEV++EG EEPK+                                                     
Subjt:  MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKE-----------------------------------------------------

Query:  TVVNQLNRNGEILAEPRVLEKILRSLTNNFEN-VVCAIEESNDLATFIVNELAGSLEAHEQL--EEEVADQFTPTFSATNVTNMITLQTI----------
        TV NQLNR GE+L E R++EKILRSLT N EN VVC IEES DLATF V+E+  SLEAHEQ   ++E  D+   T ++ N   ++  Q            
Subjt:  TVVNQLNRNGEILAEPRVLEKILRSLTNNFEN-VVCAIEESNDLATFIVNELAGSLEAHEQL--EEEVADQFTPTFSATNVTNMITLQTI----------

Query:  ------------ITPTNVTIVAD--------------------------------------------GHFVKDCRADKKVEEKINLALDDATNERLLLMA
                         ++  A+                                            GH+ +DCRA++KVEE INLALDDATN  +LLMA
Subjt:  ------------ITPTNVTIVAD--------------------------------------------GHFVKDCRADKKVEEKINLALDDATNERLLLMA

Query:  QNEVQKVKEHDAEKYDGGSYEMVESVGNEGIRSGFGNCNIGDEKIE
        QNE  K KEH + K DG S E +E+V NE +R+  GN + GDEKIE
Subjt:  QNEVQKVKEHDAEKYDGGSYEMVESVGNEGIRSGFGNCNIGDEKIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein1.9e-0735.29Show/hide
Query:  LPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPK-ETVVNQLNRNGEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATF
        +P L K+ Y+NWS+ MKA+LG+ D WE+VE+G  EP+ E  ++Q  ++G            LR      +  +C I +  D  TF
Subjt:  LPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPK-ETVVNQLNRNGEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATGTGACGGGTCATATGCTGCTACCGCGACTAATGAAGACACAATACGAGAATTGGAGCATTCATATGAAAGCTCTTCTCGGTTCTCAAGATGCATGGGAGGT
GGTCGAAGAAGGGTTAGAAGAACCAAAAGAGACTGTGGTAAACCAACTCAACCGAAATGGAGAAATCTTAGCCGAGCCGCGGGTTTTGGAGAAGATTTTAAGGTCATTAA
CCAACAATTTTGAGAATGTTGTATGCGCGATAGAAGAGTCAAATGACCTAGCGACGTTCATAGTCAACGAGCTAGCCGGTTCTCTCGAGGCACACGAGCAACTCGAGGAA
GAGGTGGCCGATCAATTTACTCCAACATTCAGTGCTACAAATGTCACAAATATGATCACTTTGCAAACGATTATAACTCCGACAAATGTTACAATTGTGGCAGATGGGCA
TTTTGTAAAAGATTGTCGAGCCGATAAAAAGGTGGAAGAAAAAATCAACCTAGCCTTGGATGACGCAACAAACGAACGTCTTCTCTTGATGGCTCAAAATGAAGTTCAGA
AAGTGAAAGAACACGATGCAGAAAAATACGATGGCGGTAGTTATGAGATGGTGGAATCCGTTGGAAATGAGGGGATACGCAGCGGATTTGGCAATTGCAATATCGGAGAT
GAGAAAATCGAAGAAGGAATCTGGATTGAGCACGCGATCGGTGAACGAGCTAAAGAAACTTCTAGATCGTCAGAAGGAGAACAGAGATTTAGAGCAACAACCAAAATCTA
CGTAGATAAATCTGTGGAGAAGTCTCAATTGCAGACGTTGAAATCGTTGAACGAGACACCTTTTGAAGGAGAAAGTAGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATGTGACGGGTCATATGCTGCTACCGCGACTAATGAAGACACAATACGAGAATTGGAGCATTCATATGAAAGCTCTTCTCGGTTCTCAAGATGCATGGGAGGT
GGTCGAAGAAGGGTTAGAAGAACCAAAAGAGACTGTGGTAAACCAACTCAACCGAAATGGAGAAATCTTAGCCGAGCCGCGGGTTTTGGAGAAGATTTTAAGGTCATTAA
CCAACAATTTTGAGAATGTTGTATGCGCGATAGAAGAGTCAAATGACCTAGCGACGTTCATAGTCAACGAGCTAGCCGGTTCTCTCGAGGCACACGAGCAACTCGAGGAA
GAGGTGGCCGATCAATTTACTCCAACATTCAGTGCTACAAATGTCACAAATATGATCACTTTGCAAACGATTATAACTCCGACAAATGTTACAATTGTGGCAGATGGGCA
TTTTGTAAAAGATTGTCGAGCCGATAAAAAGGTGGAAGAAAAAATCAACCTAGCCTTGGATGACGCAACAAACGAACGTCTTCTCTTGATGGCTCAAAATGAAGTTCAGA
AAGTGAAAGAACACGATGCAGAAAAATACGATGGCGGTAGTTATGAGATGGTGGAATCCGTTGGAAATGAGGGGATACGCAGCGGATTTGGCAATTGCAATATCGGAGAT
GAGAAAATCGAAGAAGGAATCTGGATTGAGCACGCGATCGGTGAACGAGCTAAAGAAACTTCTAGATCGTCAGAAGGAGAACAGAGATTTAGAGCAACAACCAAAATCTA
CGTAGATAAATCTGTGGAGAAGTCTCAATTGCAGACGTTGAAATCGTTGAACGAGACACCTTTTGAAGGAGAAAGTAGACATTGA
Protein sequenceShow/hide protein sequence
MANVTGHMLLPRLMKTQYENWSIHMKALLGSQDAWEVVEEGLEEPKETVVNQLNRNGEILAEPRVLEKILRSLTNNFENVVCAIEESNDLATFIVNELAGSLEAHEQLEE
EVADQFTPTFSATNVTNMITLQTIITPTNVTIVADGHFVKDCRADKKVEEKINLALDDATNERLLLMAQNEVQKVKEHDAEKYDGGSYEMVESVGNEGIRSGFGNCNIGD
EKIEEGIWIEHAIGERAKETSRSSEGEQRFRATTKIYVDKSVEKSQLQTLKSLNETPFEGESRH