; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G010330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding protein Musashi homolog 1
Genome locationCmo_Chr20:8893517..8898222
RNA-Seq ExpressionCmoCh20G010330
SyntenyCmoCh20G010330
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571306.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-11094.01Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ  GGGGGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

XP_022932294.1 heterogeneous nuclear ribonucleoprotein D0-like [Cucurbita moschata]1.2e-11295.39Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

XP_022973186.1 heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 [Cucurbita maxima]4.0e-10892.63Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ    GGGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRS HRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

XP_022973187.1 heterogeneous nuclear ribonucleoprotein 1-like isoform X2 [Cucurbita maxima]4.0e-10892.63Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ    GGGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRS HRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

XP_031737419.1 heterogeneous nuclear ribonucleoprotein A/B isoform X1 [Cucumis sativus]5.1e-10388.99Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ     GGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWG
        PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWG
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWG

Query:  YGIGGGRPSRGDWRYRPY
        YGIGGGRPSR DWRYRPY
Subjt:  YGIGGGRPSRGDWRYRPY

TrEMBL top hitse value%identityAlignment
A0A0A0LMN9 Uncharacterized protein2.5e-10388.99Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ     GGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWG
        PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWG
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWG

Query:  YGIGGGRPSRGDWRYRPY
        YGIGGGRPSR DWRYRPY
Subjt:  YGIGGGRPSRGDWRYRPY

A0A1S3C728 RNA-binding protein Musashi homolog 12.7e-10288.07Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ       GGGGGGYGAY+AYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWG
        PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWG
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWG

Query:  YGIGGGRPSRGDWRYRPY
        YGIGGGRPSR DWRYRPY
Subjt:  YGIGGGRPSRGDWRYRPY

A0A6J1EWL0 heterogeneous nuclear ribonucleoprotein D0-like5.9e-11395.39Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

A0A6J1I6V1 heterogeneous nuclear ribonucleoprotein 1-like isoform X22.0e-10892.63Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ    GGGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRS HRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

A0A6J1I7Z8 heterogeneous nuclear ribonucleoprotein D-like-B isoform X12.0e-10892.63Show/hide
Query:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
        +DDDFRPIGKMPQ    GGGGGGGGGYGAY+AYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD
Subjt:  QDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKD

Query:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
        PKRS HRGFGFVTFAEDGVADRVSRRSHEICGQ         QVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY
Subjt:  PKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGY

Query:  GIGGGRPSRGDWRYRPY
        GIGGGRPSRGDWRYRPY
Subjt:  GIGGGRPSRGDWRYRPY

SwissProt top hitse value%identityAlignment
Q08473 RNA-binding protein squid2.1e-1130.99Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF-AEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDD-----------
        KIFVG L  E S ++++ YFG+FG I++V +P D ++S  +GF F+TF +E  V D +     +I G++VD         +  ATP  +           
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF-AEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDD-----------

Query:  ----EAGAGAAGASGSFMMN-SAAESFGGYAGPMRTYGR----------MYGSLDFDDWGYGIGGGRPSRG
              G G  G  G +        S+GGY G    YG            Y   D+   GYG GGG    G
Subjt:  ----EAGAGAAGASGSFMMN-SAAESFGGYAGPMRTYGR----------MYGSLDFDDWGYGIGGGRPSRG

Q28F51 TAR DNA-binding protein 431.4e-1037.21Show/hide
Query:  KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATP
        +K+FVGR  ++ SA++LRQ+F ++G ++DV++PK       R F FVTFA+D VA         +CG+  D+ ++ + V + +A P
Subjt:  KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATP

Q5ZLN5 TAR DNA-binding protein 436.9e-1032.85Show/hide
Query:  KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDD-----EAGAGA
        +K+FVGR  ++ +AD+L+Q+F ++G ++DV++PK       R F FVTFA+D VA         +CG+  D+ ++ + V I +A P  +     E G   
Subjt:  KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDD-----EAGAGA

Query:  AGASGSF-MMNSAAESFGGYAGPMRTYG-RMYGSLDF
         G  G F        S GG  G     G  M G ++F
Subjt:  AGASGSF-MMNSAAESFGGYAGPMRTYG-RMYGSLDF

Q96EP5 DAZ-associated protein 16.9e-1033.33Show/hide
Query:  GRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADR-VSRRSHEICGQQVDICLRNLQVAIDSATPLDDE
        G R       KIFVG +P      +LR+YF +FG + +V +  D ++   RGFGF+TF ++   D+ V+   H+I G++V+         +  A P D +
Subjt:  GRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADR-VSRRSHEICGQQVDICLRNLQVAIDSATPLDDE

Query:  AGA-GAAGAS--GSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDW---GYGIGG-GRPSRG
        + A G  GAS  GS ++ +AA  + G   P  T+ + YG      W   G  IGG G P  G
Subjt:  AGA-GAAGAS--GSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDW---GYGIGG-GRPSRG

Q9VVE5 RNA-binding protein Musashi homolog Rbp68.2e-1145.07Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV-SRRSHEICGQQVD
        K+F+G L  + S + LR YFGR+G I +  V KDP     RGFGFVTF++    D+V ++ +HE+ G++VD
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV-SRRSHEICGQQVD

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.8e-1140.85Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDI
        K+FVG +  E +A+    YFG+FG ++D  +  D      RGFGFVTFA+  VA++V    H I  ++VD+
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDI

AT1G58470.1 RNA-binding protein 18.4e-1142.25Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDI
        K+FVG + +E S + L+QYF R+G +L+  V K+      RGFGFV FA D    +  R +H I G+ VD+
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDI

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-7269.15Show/hide
Query:  GGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRRE--FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAE
        GG G  GGYGAY AYISAATRYAALGAPTLYD+P   YGR E   RG+G KIFVGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE
Subjt:  GGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRRE--FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAE

Query:  DGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRP
        +GVADRV+RRSHEICGQ         +VAIDSATPLD+   AG +  + S + +S  E FGGY GPMR +GRMYG +  DDWGYG+   RPSR D RYRP
Subjt:  DGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRP

Query:  Y
        Y
Subjt:  Y

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-7269.15Show/hide
Query:  GGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRRE--FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAE
        GG G  GGYGAY AYISAATRYAALGAPTLYD+P   YGR E   RG+G KIFVGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE
Subjt:  GGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRRE--FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAE

Query:  DGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRP
        +GVADRV+RRSHEICGQ         +VAIDSATPLD+   AG +  + S + +S  E FGGY GPMR +GRMYG +  DDWGYG+   RPSR D RYRP
Subjt:  DGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRP

Query:  Y
        Y
Subjt:  Y

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-1345.07Show/hide
Query:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDI
        KIFVG L +E ++ +  ++FG++G I D  + KD K    RGFGFVT+A+  V D+V + +H I G+QV+I
Subjt:  KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDI

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-0141.67Show/hide
Query:  GAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGG
        G G  G  G     S  E  GGY GP  +YG  YGS     +G G+GG
Subjt:  GAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATAAAAGTTTGCTATATTTCCAGGATGATGATTTCAGGCCTATTGGGAAAATGCCGCAAGGGGGTGGGGGTGGGGGTGGGGGTGGTGGTGGGGGTGGATATGG
CGCATACAGTGCTTATATTTCTGCAGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCCCAGTTTATGGGAGAAGGGAATTTCGAGGGATGG
GAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGCCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTCTATGTTCCCAAGGATCCT
AAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCGGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTAGACATCTG
CCTTCGGAATCTGCAGGTTGCTATCGATTCAGCCACTCCTCTTGATGATGAAGCTGGAGCTGGAGCAGCTGGAGCAAGTGGAAGTTTTATGATGAACAGCGCCGCAGAAT
CGTTCGGTGGCTATGCGGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGATTTCGATGATTGGGGTTATGGAATTGGTGGAGGAAGGCCATCTAGAGGAGAC
TGGAGGTATCGGCCATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATAAAAGTTTGCTATATTTCCAGGATGATGATTTCAGGCCTATTGGGAAAATGCCGCAAGGGGGTGGGGGTGGGGGTGGGGGTGGTGGTGGGGGTGGATATGG
CGCATACAGTGCTTATATTTCTGCAGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCCCAGTTTATGGGAGAAGGGAATTTCGAGGGATGG
GAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGCCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTCTATGTTCCCAAGGATCCT
AAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCGGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTAGACATCTG
CCTTCGGAATCTGCAGGTTGCTATCGATTCAGCCACTCCTCTTGATGATGAAGCTGGAGCTGGAGCAGCTGGAGCAAGTGGAAGTTTTATGATGAACAGCGCCGCAGAAT
CGTTCGGTGGCTATGCGGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGATTTCGATGATTGGGGTTATGGAATTGGTGGAGGAAGGCCATCTAGAGGAGAC
TGGAGGTATCGGCCATACTGAAGAATTGGCCTATAATACTATCTATGAGGAAGAAAGATAAATGTATGCTTATTGCATTATTTATTTATGCTTTGTTTTCTTAAAAGAGC
TGGAAAACCTCTCAATCACACGTATGGTTGTTGTTGGGAAGGTTGTGGTTAGAAGTGTTATTAGTTGTTGTATTCTTCTCTAACTCTGCTTTAAAATTAATCAATTTTTG
GAATTCTTAGGATGCTTTTTTGGATGACTAATTAAATATGTTATTTTCTCA
Protein sequenceShow/hide protein sequence
MSNKSLLYFQDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDP
KRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVDICLRNLQVAIDSATPLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGD
WRYRPY